RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 SLC39A2Q9NP94 309 aa11.44□□□□□ -0.58
DDB1-204ENST00000535147 SH3GLB2Q9NR46 395 aa11.44□□□□□ -0.58
DDB1-204ENST00000535147 DMGDHQ9UI17 866 aaKnown RBP11.44□□□□□ -0.58
DDB1-204ENST00000535147 TARSL2A2RTX5 802 aaKnown RBP11.44□□□□□ -0.58
DDB1-204ENST00000535147 CCNT1O60563 726 aaKnown RBP11.44□□□□□ -0.58
DDB1-204ENST00000535147 MOCS3O95396 460 aa11.44□□□□□ -0.58
DDB1-204ENST00000535147 TECP42680 631 aa11.44□□□□□ -0.58
DDB1-204ENST00000535147 VAV2P52735 878 aa11.44□□□□□ -0.58
DDB1-204ENST00000535147 SLC7A5Q01650 507 aa11.44□□□□□ -0.58
DDB1-204ENST00000535147 ATP2B2Q01814 1243 aa11.44□□□□□ -0.58
DDB1-204ENST00000535147 SF3B3Q15393 1217 aaKnown RBP11.44□□□□□ -0.58
DDB1-204ENST00000535147 SBK1Q52WX2 424 aa11.44□□□□□ -0.58
DDB1-204ENST00000535147 FKBP15Q5T1M5 1219 aa11.44□□□□□ -0.58
DDB1-204ENST00000535147 C2CD5Q86YS7 1000 aa11.44□□□□□ -0.58
DDB1-204ENST00000535147 CREG2Q8IUH2 290 aa11.44□□□□□ -0.58
DDB1-204ENST00000535147 CCDC170Q8IYT3 715 aa11.44□□□□□ -0.58
DDB1-204ENST00000535147 ANKRD13CQ8N6S4 541 aa11.44□□□□□ -0.58
DDB1-204ENST00000535147 SMARCC1Q92922 1105 aaPredicted RBP11.44□□□□□ -0.58
DDB1-204ENST00000535147 PURBQ96QR8 312 aaKnown RBP11.44□□□□□ -0.58
DDB1-204ENST00000535147 LRRC1Q9BTT6 524 aa11.44□□□□□ -0.58
DDB1-204ENST00000535147 NUP58Q9BVL2 599 aa11.44□□□□□ -0.58
DDB1-204ENST00000535147 RABEP2Q9H5N1 569 aa11.44□□□□□ -0.58
DDB1-204ENST00000535147 MKNK2Q9HBH9 465 aa11.44□□□□□ -0.58
DDB1-204ENST00000535147 ARHGAP20Q9P2F6 1191 aa11.44□□□□□ -0.58
DDB1-204ENST00000535147 MCM3P25205 808 aa11.43□□□□□ -0.58
DDB1-204ENST00000535147 GRM4Q14833 912 aa11.43□□□□□ -0.58
DDB1-204ENST00000535147 SPA17Q15506 151 aa11.43□□□□□ -0.58
DDB1-204ENST00000535147 C12orf60Q5U649 245 aa11.43□□□□□ -0.58
DDB1-204ENST00000535147 ZNF662Q6ZS27 426 aa11.43□□□□□ -0.58
DDB1-204ENST00000535147 DGKHQ86XP1 1220 aa11.43□□□□□ -0.58
DDB1-204ENST00000535147 KIAA0895Q8NCT3 520 aa11.43□□□□□ -0.58
DDB1-204ENST00000535147 RRP36Q96EU6 259 aaKnown RBP11.43□□□□□ -0.58
DDB1-204ENST00000535147 RPGRIP1Q96KN7 1286 aa11.43□□□□□ -0.58
DDB1-204ENST00000535147 IFIH1Q9BYX4 1025 aaKnown RBP11.43□□□□□ -0.58
DDB1-204ENST00000535147 SEMA6BQ9H3T3 888 aa11.43□□□□□ -0.58
DDB1-204ENST00000535147 TCP11L1Q9NUJ3 509 aa11.43□□□□□ -0.58
DDB1-204ENST00000535147 BARHL2Q9NY43 387 aa11.43□□□□□ -0.58
DDB1-204ENST00000535147 MYH10P35580 1976 aa11.43□□□□□ -0.58
DDB1-204ENST00000535147 ANO9A1A5B4 782 aa11.43□□□□□ -0.58
DDB1-204ENST00000535147 NFRKBQ6P4R8 1299 aa11.43□□□□□ -0.58
DDB1-204ENST00000535147 DZIP1Q86YF9 867 aaKnown RBP11.43□□□□□ -0.58
DDB1-204ENST00000535147 RETREG2Q8NC44 543 aa11.43□□□□□ -0.58
DDB1-204ENST00000535147 NOC3LQ8WTT2 800 aaKnown RBP11.43□□□□□ -0.58
DDB1-204ENST00000535147 EHD4Q9H223 541 aa11.43□□□□□ -0.58
DDB1-204ENST00000535147 MKRN1Q9UHC7 482 aaKnown RBP11.43□□□□□ -0.58
DDB1-204ENST00000535147 SNX12Q9UMY4 172 aa11.43□□□□□ -0.58
DDB1-204ENST00000535147 ZNF652Q9Y2D9 606 aa11.43□□□□□ -0.58
DDB1-204ENST00000535147 BICDL2A1A5D9 508 aa11.42□□□□□ -0.58
DDB1-204ENST00000535147 MYL1P05976 194 aa11.42□□□□□ -0.58
DDB1-204ENST00000535147 OR52Z1P0C646 297 aa11.42□□□□□ -0.58
DDB1-204ENST00000535147 TSPY3P0CV98 308 aa11.42□□□□□ -0.58
DDB1-204ENST00000535147 TSPY8P0CW00 308 aa11.42□□□□□ -0.58
DDB1-204ENST00000535147 EIF4A3P38919 411 aaKnown RBP11.42□□□□□ -0.58
DDB1-204ENST00000535147 DIXDC1Q155Q3 683 aa11.42□□□□□ -0.58
DDB1-204ENST00000535147 SND1Q7KZF4 910 aaKnown RBP eCLIP11.42□□□□□ -0.582e-7■■■□□ 16
DDB1-204ENST00000535147 SH3RF3Q8TEJ3 882 aaPredicted RBP11.42□□□□□ -0.58
DDB1-204ENST00000535147 ERGIC2Q96RQ1 377 aa11.42□□□□□ -0.58
DDB1-204ENST00000535147 MMRN2Q9H8L6 949 aa11.42□□□□□ -0.58
DDB1-204ENST00000535147 VAT1LQ9HCJ6 419 aa11.42□□□□□ -0.58
DDB1-204ENST00000535147 GOLGA6BA6NDN3 693 aa11.42□□□□□ -0.58
DDB1-204ENST00000535147 KCNQ2O43526 872 aa11.42□□□□□ -0.58
DDB1-204ENST00000535147 NCK2O43639 380 aa11.42□□□□□ -0.58
DDB1-204ENST00000535147 NAPAP54920 295 aa11.42□□□□□ -0.58
DDB1-204ENST00000535147 RPS8P62241 208 aaKnown RBP11.42□□□□□ -0.58
DDB1-204ENST00000535147 DYMQ7RTS9 669 aa11.42□□□□□ -0.58
DDB1-204ENST00000535147 ZSCAN29Q8IWY8 852 aaPredicted RBP11.42□□□□□ -0.58
DDB1-204ENST00000535147 TMEM47Q9BQJ4 181 aa11.42□□□□□ -0.58
DDB1-204ENST00000535147 MMTAG2Q9BU76 263 aaKnown RBP11.42□□□□□ -0.58
DDB1-204ENST00000535147 SAP30BPQ9UHR5 308 aaKnown RBP11.42□□□□□ -0.58
DDB1-204ENST00000535147 PCDHA13Q9Y5I0 950 aa11.42□□□□□ -0.58
DDB1-204ENST00000535147 DOT1LQ8TEK3 1739 aa11.42□□□□□ -0.58
DDB1-204ENST00000535147 KLRF2D3W0D1 207 aa11.41□□□□□ -0.58
DDB1-204ENST00000535147 PPFIA4O75335 1185 aa11.41□□□□□ -0.58
DDB1-204ENST00000535147 KIF11P52732 1056 aa11.41□□□□□ -0.58
DDB1-204ENST00000535147 DDB1Q16531 1140 aa11.41□□□□□ -0.58
DDB1-204ENST00000535147 CCDC155Q8N6L0 562 aa11.41□□□□□ -0.58
DDB1-204ENST00000535147 CCDC47Q96A33 483 aaKnown RBP11.41□□□□□ -0.58
DDB1-204ENST00000535147 DEF6Q9H4E7 631 aa11.41□□□□□ -0.58
DDB1-204ENST00000535147 SH2D4AQ9H788 454 aa11.41□□□□□ -0.58
DDB1-204ENST00000535147 SALL4Q9UJQ4 1053 aa11.41□□□□□ -0.58
DDB1-204ENST00000535147 PLAGL2Q9UPG8 496 aa11.41□□□□□ -0.58
DDB1-204ENST00000535147 JRKLQ9Y4A0 524 aa11.41□□□□□ -0.58
DDB1-204ENST00000535147 SCN7AQ01118 1682 aa11.41□□□□□ -0.58
DDB1-204ENST00000535147 AKR1B10O60218 316 aa11.41□□□□□ -0.58
DDB1-204ENST00000535147 PRPHP41219 470 aa11.41□□□□□ -0.58
DDB1-204ENST00000535147 TXKP42681 527 aa11.41□□□□□ -0.58
DDB1-204ENST00000535147 GNAQP50148 359 aa11.41□□□□□ -0.58
DDB1-204ENST00000535147 GRIK5Q16478 980 aa11.41□□□□□ -0.58
DDB1-204ENST00000535147 TTC19Q6DKK2 380 aaPredicted RBP11.41□□□□□ -0.58
DDB1-204ENST00000535147 FAM114A1Q8IWE2 563 aa11.41□□□□□ -0.58
DDB1-204ENST00000535147 MARCH10Q8NA82 808 aaPredicted RBP11.41□□□□□ -0.58
DDB1-204ENST00000535147 DAGLBQ8NCG7 672 aa11.41□□□□□ -0.58
DDB1-204ENST00000535147 SPATA4Q8NEY3 305 aa11.41□□□□□ -0.58
DDB1-204ENST00000535147 TRIM58Q8NG06 486 aa11.41□□□□□ -0.58
DDB1-204ENST00000535147 AENQ8WTP8 325 aaKnown RBP11.41□□□□□ -0.58
DDB1-204ENST00000535147 C7orf25Q9BPX7 421 aa11.41□□□□□ -0.58
DDB1-204ENST00000535147 FAM184BQ9ULE4 1060 aa11.41□□□□□ -0.58
DDB1-204ENST00000535147 GOLGA6CA6NDK9 693 aa11.4□□□□□ -0.58
DDB1-204ENST00000535147 SMCO2A6NFE2 343 aa11.4□□□□□ -0.58
DDB1-204ENST00000535147 TACC1O75410 805 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms