RNA–Protein interactions for RNA: ENST00000534010.1

SDHD-208, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-208ENST00000534010 PARP1P09874 1014 aaKnown RBP12.64□□□□□ -0.39
SDHD-208ENST00000534010 SMPD1P17405 629 aa12.64□□□□□ -0.39
SDHD-208ENST00000534010 SYN1P17600 705 aa12.64□□□□□ -0.39
SDHD-208ENST00000534010 ATN1P54259 1190 aaPredicted RBP12.64□□□□□ -0.39
SDHD-208ENST00000534010 KCNA10Q16322 511 aa12.64□□□□□ -0.39
SDHD-208ENST00000534010 TRIM60Q495X7 471 aa12.64□□□□□ -0.39
SDHD-208ENST00000534010 IQSEC1Q6DN90 963 aa12.64□□□□□ -0.39
SDHD-208ENST00000534010 NSMFQ6X4W1 530 aa12.64□□□□□ -0.39
SDHD-208ENST00000534010 NCOA7Q8NI08 942 aa12.64□□□□□ -0.39
SDHD-208ENST00000534010 TBC1D5Q92609 795 aa12.64□□□□□ -0.39
SDHD-208ENST00000534010 TRIM43Q96BQ3 446 aaPredicted RBP12.64□□□□□ -0.39
SDHD-208ENST00000534010 UBAC1Q9BSL1 405 aa12.64□□□□□ -0.39
SDHD-208ENST00000534010 LY9Q9HBG7 655 aa12.64□□□□□ -0.39
SDHD-208ENST00000534010 PDGFCQ9NRA1 345 aa12.64□□□□□ -0.39
SDHD-208ENST00000534010 COL20A1Q9P218 1284 aa12.64□□□□□ -0.39
SDHD-208ENST00000534010 PCDH10Q9P2E7 1040 aa12.64□□□□□ -0.39
SDHD-208ENST00000534010 ADD3Q9UEY8 706 aaKnown RBP12.64□□□□□ -0.39
SDHD-208ENST00000534010 GRIN2DO15399 1336 aa12.63□□□□□ -0.39
SDHD-208ENST00000534010 ABCB11O95342 1321 aa12.63□□□□□ -0.39
SDHD-208ENST00000534010 TRANK1O15050 2925 aa12.63□□□□□ -0.39
SDHD-208ENST00000534010 SLC27A2O14975 620 aa12.63□□□□□ -0.39
SDHD-208ENST00000534010 KIAA0355O15063 1070 aa12.63□□□□□ -0.39
SDHD-208ENST00000534010 ITGB8P26012 769 aa12.63□□□□□ -0.39
SDHD-208ENST00000534010 SLC4A3P48751 1232 aa12.63□□□□□ -0.39
SDHD-208ENST00000534010 HSD17B4P51659 736 aa12.63□□□□□ -0.39
SDHD-208ENST00000534010 TLE2Q04725 743 aa12.63□□□□□ -0.39
SDHD-208ENST00000534010 DUSP28Q4G0W2 176 aa12.63□□□□□ -0.39
SDHD-208ENST00000534010 GPR153Q6NV75 609 aa12.63□□□□□ -0.39
SDHD-208ENST00000534010 RNF207Q6ZRF8 634 aa12.63□□□□□ -0.39
SDHD-208ENST00000534010 SH3RF1Q7Z6J0 888 aa12.63□□□□□ -0.39
SDHD-208ENST00000534010 SYTL5Q8TDW5 730 aaPredicted RBP12.63□□□□□ -0.39
SDHD-208ENST00000534010 KCNB2Q92953 911 aa12.63□□□□□ -0.39
SDHD-208ENST00000534010 TBX21Q9UL17 535 aa12.63□□□□□ -0.39
SDHD-208ENST00000534010 PRUNE2Q8WUY3 3088 aa12.62□□□□□ -0.39
SDHD-208ENST00000534010 KLRF2D3W0D1 207 aa12.62□□□□□ -0.39
SDHD-208ENST00000534010 ZBTB5O15062 677 aa12.62□□□□□ -0.39
SDHD-208ENST00000534010 ASGR1P07306 291 aa12.62□□□□□ -0.39
SDHD-208ENST00000534010 PTGS1P23219 599 aa12.62□□□□□ -0.39
SDHD-208ENST00000534010 SMARCA1P28370 1054 aa12.62□□□□□ -0.39
SDHD-208ENST00000534010 LIFRP42702 1097 aa12.62□□□□□ -0.39
SDHD-208ENST00000534010 TNFAIP2Q03169 654 aa12.62□□□□□ -0.39
SDHD-208ENST00000534010 FAAP100Q0VG06 881 aa12.62□□□□□ -0.39
SDHD-208ENST00000534010 TRDNQ13061 729 aa12.62□□□□□ -0.39
SDHD-208ENST00000534010 CREB3L3Q68CJ9 461 aa12.62□□□□□ -0.39
SDHD-208ENST00000534010 CCDC62Q6P9F0 684 aa12.62□□□□□ -0.39
SDHD-208ENST00000534010 FBXO16Q8IX29 292 aaPredicted RBP12.62□□□□□ -0.39
SDHD-208ENST00000534010 TDHQ8IZJ6 230 aa12.62□□□□□ -0.39
SDHD-208ENST00000534010 SAMD3Q8N6K7 520 aa12.62□□□□□ -0.39
SDHD-208ENST00000534010 PCSK9Q8NBP7 692 aaKnown RBP12.62□□□□□ -0.39
SDHD-208ENST00000534010 FERMT2Q96AC1 680 aa12.62□□□□□ -0.39
SDHD-208ENST00000534010 MAP3K20Q9NYL2 800 aaKnown RBP12.62□□□□□ -0.39
SDHD-208ENST00000534010 ISY1Q9ULR0 285 aaKnown RBP12.62□□□□□ -0.39
SDHD-208ENST00000534010 UNC80Q8N2C7 3258 aa12.62□□□□□ -0.39
SDHD-208ENST00000534010 FRMPD4Q14CM0 1322 aa12.62□□□□□ -0.39
SDHD-208ENST00000534010 SH2B2O14492 632 aaPredicted RBP12.61□□□□□ -0.39
SDHD-208ENST00000534010 IFIT3O14879 490 aaKnown RBP12.61□□□□□ -0.39
SDHD-208ENST00000534010 CD4P01730 458 aa12.61□□□□□ -0.39
SDHD-208ENST00000534010 SGMS1Q86VZ5 419 aa12.61□□□□□ -0.39
SDHD-208ENST00000534010 FBXO11Q86XK2 927 aa12.61□□□□□ -0.39
SDHD-208ENST00000534010 NUP133Q8WUM0 1156 aa12.61□□□□□ -0.39
SDHD-208ENST00000534010 SPZ1Q9BXG8 430 aa12.61□□□□□ -0.39
SDHD-208ENST00000534010 GPHNQ9NQX3 736 aaPredicted RBP12.61□□□□□ -0.39
SDHD-208ENST00000534010 MYH7BA7E2Y1 1941 aa12.6□□□□□ -0.39
SDHD-208ENST00000534010 PTPDC1A2A3K4 754 aa12.6□□□□□ -0.39
SDHD-208ENST00000534010 C6orf222P0C671 652 aaPredicted RBP12.6□□□□□ -0.39
SDHD-208ENST00000534010 EXOSC10Q01780 885 aaKnown RBP12.6□□□□□ -0.39
SDHD-208ENST00000534010 WTAPQ15007 396 aa12.6□□□□□ -0.39
SDHD-208ENST00000534010 USH1GQ495M9 461 aa12.6□□□□□ -0.39
SDHD-208ENST00000534010 CHST3Q7LGC8 479 aa12.6□□□□□ -0.39
SDHD-208ENST00000534010 RALYLQ86SE5 291 aaKnown RBP12.6□□□□□ -0.39
SDHD-208ENST00000534010 TLK2Q86UE8 772 aa12.6□□□□□ -0.39
SDHD-208ENST00000534010 FAM126BQ8IXS8 530 aa12.6□□□□□ -0.39
SDHD-208ENST00000534010 TMEM87BQ96K49 555 aa12.6□□□□□ -0.39
SDHD-208ENST00000534010 AMNQ9BXJ7 453 aa12.6□□□□□ -0.39
SDHD-208ENST00000534010 SEZ6LQ9BYH1 1024 aa12.6□□□□□ -0.39
SDHD-208ENST00000534010 STARD7Q9NQZ5 370 aa12.6□□□□□ -0.39
SDHD-208ENST00000534010 ATP11BQ9Y2G3 1177 aa12.6□□□□□ -0.39
SDHD-208ENST00000534010 MRPL11Q9Y3B7 192 aaKnown RBP12.6□□□□□ -0.39
SDHD-208ENST00000534010 SPTBN5Q9NRC6 3674 aaKnown RBP12.59□□□□□ -0.39
SDHD-208ENST00000534010 A6NJR5 290 aa12.59□□□□□ -0.39
SDHD-208ENST00000534010 ARVCFO00192 962 aa12.59□□□□□ -0.39
SDHD-208ENST00000534010 NKRFO15226 690 aaKnown RBP eCLIP12.59□□□□□ -0.39
SDHD-208ENST00000534010 CABYRO75952 493 aa12.59□□□□□ -0.39
SDHD-208ENST00000534010 RGS20O76081 388 aa12.59□□□□□ -0.39
SDHD-208ENST00000534010 DDAH1O94760 285 aa12.59□□□□□ -0.39
SDHD-208ENST00000534010 ARIH2O95376 493 aa12.59□□□□□ -0.39
SDHD-208ENST00000534010 CLTBP09497 229 aa12.59□□□□□ -0.39
SDHD-208ENST00000534010 CALML3P27482 149 aa12.59□□□□□ -0.39
SDHD-208ENST00000534010 BEX3Q00994 111 aa12.59□□□□□ -0.39
SDHD-208ENST00000534010 FSCN1Q16658 493 aaKnown RBP12.59□□□□□ -0.39
SDHD-208ENST00000534010 TMEM67Q5HYA8 995 aa12.59□□□□□ -0.39
SDHD-208ENST00000534010 GNASQ5JWF2 1037 aa12.59□□□□□ -0.39
SDHD-208ENST00000534010 RASEFQ8IZ41 740 aa12.59□□□□□ -0.39
SDHD-208ENST00000534010 ZNF654Q8IZM8 581 aa12.59□□□□□ -0.39
SDHD-208ENST00000534010 GLT1D1Q96MS3 346 aa12.59□□□□□ -0.39
SDHD-208ENST00000534010 TAAR1Q96RJ0 339 aa12.59□□□□□ -0.39
SDHD-208ENST00000534010 IWS1Q96ST2 819 aa12.59□□□□□ -0.39
SDHD-208ENST00000534010 WDR11Q9BZH6 1224 aa12.59□□□□□ -0.39
SDHD-208ENST00000534010 PNMA6FA0A0J9YX94 578 aa12.58□□□□□ -0.4
SDHD-208ENST00000534010 A0A0U1RQG5 324 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms