RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 CYP39A1Q9NYL5 469 aa16.2■□□□□ 0.18
CMTM1-218ENST00000533915 ADD3Q9UEY8 706 aaKnown RBP16.2■□□□□ 0.18
CMTM1-218ENST00000533915 SMC3Q9UQE7 1217 aa16.2■□□□□ 0.18
CMTM1-218ENST00000533915 ESYT2A0FGR8 921 aa16.19■□□□□ 0.18
CMTM1-218ENST00000533915 STXBP3O00186 592 aa16.19■□□□□ 0.18
CMTM1-218ENST00000533915 NFIBO00712 420 aa16.19■□□□□ 0.18
CMTM1-218ENST00000533915 PPFIA3O75145 1194 aa16.19■□□□□ 0.18
CMTM1-218ENST00000533915 CFBP00751 764 aa16.19■□□□□ 0.18
CMTM1-218ENST00000533915 XRCC5P13010 732 aaKnown RBP16.19■□□□□ 0.18
CMTM1-218ENST00000533915 ADCY7P51828 1080 aa16.19■□□□□ 0.18
CMTM1-218ENST00000533915 NLRP5P59047 1200 aa16.19■□□□□ 0.18
CMTM1-218ENST00000533915 CUL4AQ13619 759 aa16.19■□□□□ 0.18
CMTM1-218ENST00000533915 PKN1Q16512 942 aa16.19■□□□□ 0.18
CMTM1-218ENST00000533915 OTOP1Q7RTM1 612 aa16.19■□□□□ 0.18
CMTM1-218ENST00000533915 SMARCC2Q8TAQ2 1214 aa16.19■□□□□ 0.18
CMTM1-218ENST00000533915 INTS4Q96HW7 963 aaKnown RBP16.19■□□□□ 0.18
CMTM1-218ENST00000533915 APBA2Q99767 749 aa16.19■□□□□ 0.18
CMTM1-218ENST00000533915 ALG1Q9BT22 464 aa16.19■□□□□ 0.18
CMTM1-218ENST00000533915 BRMS1Q9HCU9 246 aa16.19■□□□□ 0.18
CMTM1-218ENST00000533915 DIS3Q9Y2L1 958 aaKnown RBP16.19■□□□□ 0.18
CMTM1-218ENST00000533915 ZNF236Q9UL36 1845 aa16.18■□□□□ 0.18
CMTM1-218ENST00000533915 SMCO2A6NFE2 343 aa16.18■□□□□ 0.18
CMTM1-218ENST00000533915 JAK2O60674 1132 aa16.18■□□□□ 0.18
CMTM1-218ENST00000533915 HOXC6P09630 235 aa16.18■□□□□ 0.18
CMTM1-218ENST00000533915 FLT3LGP49771 235 aa16.18■□□□□ 0.18
CMTM1-218ENST00000533915 RPS6P62753 249 aaKnown RBP16.18■□□□□ 0.18
CMTM1-218ENST00000533915 GHRHRQ02643 423 aa16.18■□□□□ 0.18
CMTM1-218ENST00000533915 IRF5Q13568 498 aa16.18■□□□□ 0.18
CMTM1-218ENST00000533915 BAATQ14032 418 aaPredicted RBP16.18■□□□□ 0.18
CMTM1-218ENST00000533915 EHMT1Q9H9B1 1298 aa16.18■□□□□ 0.18
CMTM1-218ENST00000533915 RIC8AQ9NPQ8 531 aa16.18■□□□□ 0.18
CMTM1-218ENST00000533915 GJD2Q9UKL4 321 aa16.18■□□□□ 0.18
CMTM1-218ENST00000533915 LOC102724159A0A0B4J2E5 919 aa16.17■□□□□ 0.18
CMTM1-218ENST00000533915 PIK3CDO00329 1044 aa16.17■□□□□ 0.18
CMTM1-218ENST00000533915 CTGFP29279 349 aa16.17■□□□□ 0.18
CMTM1-218ENST00000533915 ANP32AP39687 249 aaKnown RBP16.17■□□□□ 0.18
CMTM1-218ENST00000533915 HSD17B4P51659 736 aa16.17■□□□□ 0.18
CMTM1-218ENST00000533915 PRKCZQ05513 592 aa16.17■□□□□ 0.18
CMTM1-218ENST00000533915 ST3GAL1Q11201 340 aa16.17■□□□□ 0.18
CMTM1-218ENST00000533915 PWP2Q15269 919 aaKnown RBP16.17■□□□□ 0.18
CMTM1-218ENST00000533915 ZNF467Q7Z7K2 595 aaPredicted RBP16.17■□□□□ 0.18
CMTM1-218ENST00000533915 MSL3Q8N5Y2 521 aaKnown RBP16.17■□□□□ 0.18
CMTM1-218ENST00000533915 DNERQ8NFT8 737 aa16.17■□□□□ 0.18
CMTM1-218ENST00000533915 ZMYND12Q9H0C1 365 aa16.17■□□□□ 0.18
CMTM1-218ENST00000533915 VPS54Q9P1Q0 977 aa16.17■□□□□ 0.18
CMTM1-218ENST00000533915 RBBP6Q7Z6E9 1792 aaKnown RBP16.17■□□□□ 0.18
CMTM1-218ENST00000533915 DNAJC25-GNG10A0A024R161 153 aa16.16■□□□□ 0.18
CMTM1-218ENST00000533915 ASB14A6NK59 587 aa16.16■□□□□ 0.18
CMTM1-218ENST00000533915 SPDYE3A6NKU9 549 aa16.16■□□□□ 0.18
CMTM1-218ENST00000533915 FOSP01100 380 aaPredicted RBP16.16■□□□□ 0.18
CMTM1-218ENST00000533915 PGK2P07205 417 aa16.16■□□□□ 0.18
CMTM1-218ENST00000533915 TAL1P17542 331 aaPredicted RBP16.16■□□□□ 0.18
CMTM1-218ENST00000533915 CYP2B6P20813 491 aa16.16■□□□□ 0.18
CMTM1-218ENST00000533915 PDCP20941 246 aa16.16■□□□□ 0.18
CMTM1-218ENST00000533915 SAFBQ15424 915 aaKnown RBP eCLIP16.16■□□□□ 0.18
CMTM1-218ENST00000533915 NSUN6Q8TEA1 469 aaKnown RBP16.16■□□□□ 0.18
CMTM1-218ENST00000533915 USP6NLQ92738 828 aa16.16■□□□□ 0.18
CMTM1-218ENST00000533915 C8orf76Q96K31 380 aa16.16■□□□□ 0.18
CMTM1-218ENST00000533915 DAXXQ9UER7 740 aaPredicted RBP16.16■□□□□ 0.18
CMTM1-218ENST00000533915 FDPSP14324 419 aaKnown RBP16.15■□□□□ 0.18
CMTM1-218ENST00000533915 AP3B2Q13367 1082 aa16.15■□□□□ 0.18
CMTM1-218ENST00000533915 ZNF792Q3KQV3 632 aa16.15■□□□□ 0.18
CMTM1-218ENST00000533915 MFSD14CQ5VZR4 134 aa16.15■□□□□ 0.18
CMTM1-218ENST00000533915 OLFML2BQ68BL8 750 aa16.15■□□□□ 0.18
CMTM1-218ENST00000533915 SLC30A10Q6XR72 485 aa16.15■□□□□ 0.18
CMTM1-218ENST00000533915 REXO1Q8N1G1 1221 aaKnown RBP16.15■□□□□ 0.18
CMTM1-218ENST00000533915 FAM133AQ8N9E0 248 aa16.15■□□□□ 0.18
CMTM1-218ENST00000533915 SLAIN1Q8ND83 568 aa16.15■□□□□ 0.18
CMTM1-218ENST00000533915 SYTL5Q8TDW5 730 aaPredicted RBP16.15■□□□□ 0.18
CMTM1-218ENST00000533915 PXYLP1Q8TE99 480 aa16.15■□□□□ 0.18
CMTM1-218ENST00000533915 GABRQQ9UN88 632 aa16.15■□□□□ 0.18
CMTM1-218ENST00000533915 PTPN22Q9Y2R2 807 aa16.15■□□□□ 0.18
CMTM1-218ENST00000533915 PLXNA1Q9UIW2 1896 aa16.14■□□□□ 0.17
CMTM1-218ENST00000533915 OPLAHO14841 1288 aa16.14■□□□□ 0.17
CMTM1-218ENST00000533915 ADCY3O60266 1144 aa16.14■□□□□ 0.17
CMTM1-218ENST00000533915 COBLO75128 1261 aa16.14■□□□□ 0.17
CMTM1-218ENST00000533915 PDIA4P13667 645 aaKnown RBP16.14■□□□□ 0.17
CMTM1-218ENST00000533915 GJB2P29033 226 aa16.14■□□□□ 0.17
CMTM1-218ENST00000533915 HOXA13P31271 388 aaPredicted RBP16.14■□□□□ 0.17
CMTM1-218ENST00000533915 ARHGEF16Q5VV41 709 aa16.14■□□□□ 0.17
CMTM1-218ENST00000533915 FBXO46Q6PJ61 603 aaPredicted RBP16.14■□□□□ 0.17
CMTM1-218ENST00000533915 FCHSD1Q86WN1 690 aa16.14■□□□□ 0.17
CMTM1-218ENST00000533915 IWS1Q96ST2 819 aa16.14■□□□□ 0.17
CMTM1-218ENST00000533915 RMDN3Q96TC7 470 aa16.14■□□□□ 0.17
CMTM1-218ENST00000533915 PCDHA4Q9UN74 947 aa16.14■□□□□ 0.17
CMTM1-218ENST00000533915 ZSWIM8A7E2V4 1837 aa16.13■□□□□ 0.17
CMTM1-218ENST00000533915 H3BQV1 296 aa16.13■□□□□ 0.17
CMTM1-218ENST00000533915 MEIS2O14770 477 aa16.13■□□□□ 0.17
CMTM1-218ENST00000533915 CNTN2Q02246 1040 aa16.13■□□□□ 0.17
CMTM1-218ENST00000533915 IFFO2Q5TF58 517 aa16.13■□□□□ 0.17
CMTM1-218ENST00000533915 TYW1BQ6NUM6 668 aa16.13■□□□□ 0.17
CMTM1-218ENST00000533915 USP17L6PQ6QN14 398 aa16.13■□□□□ 0.17
CMTM1-218ENST00000533915 DAGLBQ8NCG7 672 aa16.13■□□□□ 0.17
CMTM1-218ENST00000533915 TBC1D5Q92609 795 aa16.13■□□□□ 0.17
CMTM1-218ENST00000533915 MAML3Q96JK9 1138 aa16.13■□□□□ 0.17
CMTM1-218ENST00000533915 PHF20Q9BVI0 1012 aa16.13■□□□□ 0.17
CMTM1-218ENST00000533915 BIN2Q9UBW5 565 aaPredicted RBP16.13■□□□□ 0.17
CMTM1-218ENST00000533915 SYNGAP1Q96PV0 1343 aa16.13■□□□□ 0.17
CMTM1-218ENST00000533915 HMGCRP04035 888 aa16.12■□□□□ 0.17
CMTM1-218ENST00000533915 GRK4P32298 578 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms