RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 POLR3EQ9NVU0 708 aa11□□□□□ -0.65
PACS1-214ENST00000533811 ZNF536O15090 1300 aa11□□□□□ -0.65
PACS1-214ENST00000533811 PTPRSQ13332 1948 aa10.99□□□□□ -0.65
PACS1-214ENST00000533811 GPAA1O43292 621 aa10.99□□□□□ -0.65
PACS1-214ENST00000533811 TLL1O43897 1013 aa10.99□□□□□ -0.65
PACS1-214ENST00000533811 SMARCA5O60264 1052 aaPredicted RBP10.99□□□□□ -0.65
PACS1-214ENST00000533811 MCCP23508 829 aa10.99□□□□□ -0.65
PACS1-214ENST00000533811 GRB10Q13322 594 aa10.99□□□□□ -0.65
PACS1-214ENST00000533811 GIMAP6Q6P9H5 292 aa10.99□□□□□ -0.65
PACS1-214ENST00000533811 SPRED2Q7Z698 418 aa10.99□□□□□ -0.65
PACS1-214ENST00000533811 SIRT2Q8IXJ6 389 aa10.99□□□□□ -0.65
PACS1-214ENST00000533811 RETREG2Q8NC44 543 aa10.99□□□□□ -0.65
PACS1-214ENST00000533811 OR6J1Q8NGC5 347 aa10.99□□□□□ -0.65
PACS1-214ENST00000533811 STAG1Q8WVM7 1258 aa10.99□□□□□ -0.65
PACS1-214ENST00000533811 KHSRPQ92945 711 aaKnown RBP eCLIP10.99□□□□□ -0.65
PACS1-214ENST00000533811 OSBP2Q969R2 916 aa10.99□□□□□ -0.65
PACS1-214ENST00000533811 VTA1Q9NP79 307 aa10.99□□□□□ -0.65
PACS1-214ENST00000533811 CCPG1Q9ULG6 757 aa10.99□□□□□ -0.65
PACS1-214ENST00000533811 Q9Y3F1 56 aa10.99□□□□□ -0.65
PACS1-214ENST00000533811 XIRP2A4UGR9 3374 aa10.99□□□□□ -0.65
PACS1-214ENST00000533811 SCN10AQ9Y5Y9 1956 aa10.99□□□□□ -0.65
PACS1-214ENST00000533811 POU3F3P20264 500 aaPredicted RBP10.98□□□□□ -0.65
PACS1-214ENST00000533811 KCNJ6P48051 423 aa10.98□□□□□ -0.65
PACS1-214ENST00000533811 CPT1AP50416 773 aa10.98□□□□□ -0.65
PACS1-214ENST00000533811 PURAQ00577 322 aaKnown RBP10.98□□□□□ -0.65
PACS1-214ENST00000533811 HNRNPUQ00839 825 aaKnown RBP eCLIP10.98□□□□□ -0.65
PACS1-214ENST00000533811 TFAP4Q01664 338 aa10.98□□□□□ -0.65
PACS1-214ENST00000533811 PDE4BQ07343 736 aa10.98□□□□□ -0.65
PACS1-214ENST00000533811 CCDC96Q2M329 555 aa10.98□□□□□ -0.65
PACS1-214ENST00000533811 NBPF20Q3BBV1 942 aa10.98□□□□□ -0.65
PACS1-214ENST00000533811 DUSP28Q4G0W2 176 aa10.98□□□□□ -0.65
PACS1-214ENST00000533811 RASGRP2Q7LDG7 609 aa10.98□□□□□ -0.65
PACS1-214ENST00000533811 HERC6Q8IVU3 1022 aa10.98□□□□□ -0.65
PACS1-214ENST00000533811 GDPD5Q8WTR4 605 aa10.98□□□□□ -0.65
PACS1-214ENST00000533811 APPBP2Q92624 585 aa10.98□□□□□ -0.65
PACS1-214ENST00000533811 MTG1Q9BT17 334 aaPredicted RBP10.98□□□□□ -0.65
PACS1-214ENST00000533811 WDR11Q9BZH6 1224 aa10.98□□□□□ -0.65
PACS1-214ENST00000533811 CYP39A1Q9NYL5 469 aa10.98□□□□□ -0.65
PACS1-214ENST00000533811 MTUS1Q9ULD2 1270 aa10.98□□□□□ -0.65
PACS1-214ENST00000533811 NOD1Q9Y239 953 aa10.98□□□□□ -0.65
PACS1-214ENST00000533811 MUC6Q6W4X9 2439 aa10.98□□□□□ -0.65
PACS1-214ENST00000533811 PTPDC1A2A3K4 754 aa10.97□□□□□ -0.65
PACS1-214ENST00000533811 M0R2C6 588 aa10.97□□□□□ -0.65
PACS1-214ENST00000533811 SLC3A2P08195 630 aaKnown RBP10.97□□□□□ -0.65
PACS1-214ENST00000533811 RFC2P35250 354 aa10.97□□□□□ -0.65
PACS1-214ENST00000533811 BRDTQ58F21 947 aaPredicted RBP10.97□□□□□ -0.65
PACS1-214ENST00000533811 TSHZ3Q63HK5 1081 aa10.97□□□□□ -0.65
PACS1-214ENST00000533811 ALYREFQ86V81 257 aaKnown RBP10.97□□□□□ -0.65
PACS1-214ENST00000533811 KBTBD3Q8NAB2 608 aa10.97□□□□□ -0.65
PACS1-214ENST00000533811 NEDD1Q8NHV4 660 aa10.97□□□□□ -0.65
PACS1-214ENST00000533811 PHOSPHO2Q8TCD6 241 aa10.97□□□□□ -0.65
PACS1-214ENST00000533811 GMCL1Q96IK5 515 aa10.97□□□□□ -0.65
PACS1-214ENST00000533811 ZBED2Q9BTP6 218 aa10.97□□□□□ -0.65
PACS1-214ENST00000533811 LRRCC1Q9C099 1032 aa10.97□□□□□ -0.65
PACS1-214ENST00000533811 PRR12Q9ULL5 1215 aa10.97□□□□□ -0.65
PACS1-214ENST00000533811 SYNPO2Q9UMS6 1093 aa10.97□□□□□ -0.65
PACS1-214ENST00000533811 STX8Q9UNK0 236 aa10.97□□□□□ -0.65
PACS1-214ENST00000533811 ARIH1Q9Y4X5 557 aaPredicted RBP10.97□□□□□ -0.65
PACS1-214ENST00000533811 PLIN4Q96Q06 1357 aa10.97□□□□□ -0.65
PACS1-214ENST00000533811 RAD50Q92878 1312 aa10.96□□□□□ -0.65
PACS1-214ENST00000533811 RNF113AO15541 343 aaKnown RBP10.96□□□□□ -0.65
PACS1-214ENST00000533811 GPR37L1O60883 481 aa10.96□□□□□ -0.65
PACS1-214ENST00000533811 IQCF3P0C7M6 154 aa10.96□□□□□ -0.65
PACS1-214ENST00000533811 MS4A1P11836 297 aa10.96□□□□□ -0.65
PACS1-214ENST00000533811 GNAT2P19087 354 aa10.96□□□□□ -0.65
PACS1-214ENST00000533811 ALDH5A1P51649 535 aaPredicted RBP10.96□□□□□ -0.65
PACS1-214ENST00000533811 BFSP2Q13515 415 aa10.96□□□□□ -0.65
PACS1-214ENST00000533811 BAATQ14032 418 aaPredicted RBP10.96□□□□□ -0.65
PACS1-214ENST00000533811 TMCO2Q7Z6W1 182 aaPredicted RBP10.96□□□□□ -0.65
PACS1-214ENST00000533811 IFNL3Q8IZI9 196 aa10.96□□□□□ -0.65
PACS1-214ENST00000533811 MIER1Q8N108 512 aa10.96□□□□□ -0.65
PACS1-214ENST00000533811 UIMC1Q96RL1 719 aa10.96□□□□□ -0.65
PACS1-214ENST00000533811 NACAP1Q9BZK3 213 aa10.96□□□□□ -0.65
PACS1-214ENST00000533811 NAPBQ9H115 298 aa10.96□□□□□ -0.65
PACS1-214ENST00000533811 C11orf16Q9NQ32 467 aa10.96□□□□□ -0.65
PACS1-214ENST00000533811 ECHDC1Q9NTX5 307 aa10.96□□□□□ -0.65
PACS1-214ENST00000533811 ADD3Q9UEY8 706 aaKnown RBP10.96□□□□□ -0.65
PACS1-214ENST00000533811 DDX19BQ9UMR2 479 aa10.96□□□□□ -0.65
PACS1-214ENST00000533811 TRANK1O15050 2925 aa10.95□□□□□ -0.66
PACS1-214ENST00000533811 LCHNA4D1U4 455 aa10.95□□□□□ -0.66
PACS1-214ENST00000533811 TSPY2A6NKD2 308 aa10.95□□□□□ -0.66
PACS1-214ENST00000533811 NFIBO00712 420 aa10.95□□□□□ -0.66
PACS1-214ENST00000533811 CALML3P27482 149 aa10.95□□□□□ -0.66
PACS1-214ENST00000533811 SSTR3P32745 418 aaPredicted RBP10.95□□□□□ -0.66
PACS1-214ENST00000533811 PDE4DQ08499 809 aa10.95□□□□□ -0.66
PACS1-214ENST00000533811 PPP2R5BQ15173 497 aa10.95□□□□□ -0.66
PACS1-214ENST00000533811 RCSD1Q6JBY9 416 aa10.95□□□□□ -0.66
PACS1-214ENST00000533811 COPS5Q92905 334 aa10.95□□□□□ -0.66
PACS1-214ENST00000533811 GPATCH3Q96I76 525 aa10.95□□□□□ -0.66
PACS1-214ENST00000533811 CRBNQ96SW2 442 aa10.95□□□□□ -0.66
PACS1-214ENST00000533811 CD320Q9NPF0 282 aa10.95□□□□□ -0.66
PACS1-214ENST00000533811 ZBTB40Q9NUA8 1239 aa10.95□□□□□ -0.66
PACS1-214ENST00000533811 SIP14410 1827 aa10.94□□□□□ -0.66
PACS1-214ENST00000533811 PATL2C9JE40 543 aaKnown RBP10.94□□□□□ -0.66
PACS1-214ENST00000533811 PITPNM1O00562 1244 aa10.94□□□□□ -0.66
PACS1-214ENST00000533811 NMT2O60551 498 aa10.94□□□□□ -0.66
PACS1-214ENST00000533811 LPXNO60711 386 aa10.94□□□□□ -0.66
PACS1-214ENST00000533811 PLA2G6O60733 806 aa10.94□□□□□ -0.66
PACS1-214ENST00000533811 BAIAP3O94812 1187 aa10.94□□□□□ -0.66
PACS1-214ENST00000533811 ICAM1P05362 532 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms