RNA–Protein interactions for RNA: ENST00000533738.6

NUCB2-216, Transcript of nucleobindin 2, humanhuman

TSL 1 (best)

Gene NUCB2, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB2-216ENST00000533738 PDGFCQ9NRA1 345 aa13.84□□□□□ -0.19
NUCB2-216ENST00000533738 PCDH10Q9P2E7 1040 aa13.84□□□□□ -0.19
NUCB2-216ENST00000533738 ADD3Q9UEY8 706 aaKnown RBP13.84□□□□□ -0.19
NUCB2-216ENST00000533738 ZMYND8Q9ULU4 1186 aaPredicted RBP13.84□□□□□ -0.19
NUCB2-216ENST00000533738 PHF24Q9UPV7 400 aa13.84□□□□□ -0.19
NUCB2-216ENST00000533738 COLQQ9Y215 455 aaPredicted RBP13.84□□□□□ -0.19
NUCB2-216ENST00000533738 MCM3APO60318 1980 aa13.83□□□□□ -0.19
NUCB2-216ENST00000533738 LOC102724159A0A0B4J2E5 919 aa13.83□□□□□ -0.2
NUCB2-216ENST00000533738 CCDC69A6NI79 296 aa13.83□□□□□ -0.2
NUCB2-216ENST00000533738 OPLAHO14841 1288 aa13.83□□□□□ -0.2
NUCB2-216ENST00000533738 SYN1P17600 705 aa13.83□□□□□ -0.2
NUCB2-216ENST00000533738 PTGS1P23219 599 aa13.83□□□□□ -0.2
NUCB2-216ENST00000533738 LIFRP42702 1097 aa13.83□□□□□ -0.2
NUCB2-216ENST00000533738 PWP2Q15269 919 aaKnown RBP13.83□□□□□ -0.2
NUCB2-216ENST00000533738 TSGA10IPQ3SY00 556 aa13.83□□□□□ -0.2
NUCB2-216ENST00000533738 CCSAPQ6IQ19 270 aaPredicted RBP13.83□□□□□ -0.2
NUCB2-216ENST00000533738 CHRDL2Q6WN34 429 aa13.83□□□□□ -0.2
NUCB2-216ENST00000533738 NFXL1Q6ZNB6 911 aa13.83□□□□□ -0.2
NUCB2-216ENST00000533738 KLHDC9Q8NEP7 349 aa13.83□□□□□ -0.2
NUCB2-216ENST00000533738 NEK1Q96PY6 1258 aa13.83□□□□□ -0.2
NUCB2-216ENST00000533738 MAP3K14Q99558 947 aa13.83□□□□□ -0.2
NUCB2-216ENST00000533738 AMNQ9BXJ7 453 aa13.83□□□□□ -0.2
NUCB2-216ENST00000533738 UPF3AQ9H1J1 476 aaKnown RBP13.83□□□□□ -0.2
NUCB2-216ENST00000533738 VTA1Q9NP79 307 aa13.83□□□□□ -0.2
NUCB2-216ENST00000533738 COL20A1Q9P218 1284 aa13.83□□□□□ -0.2
NUCB2-216ENST00000533738 MRPL11Q9Y3B7 192 aaKnown RBP13.83□□□□□ -0.2
NUCB2-216ENST00000533738 A0A1W2PQ45 241 aaPredicted RBP13.82□□□□□ -0.2
NUCB2-216ENST00000533738 A0A1W2PQY0 241 aa13.82□□□□□ -0.2
NUCB2-216ENST00000533738 SMPD1P17405 629 aa13.82□□□□□ -0.2
NUCB2-216ENST00000533738 RXRAP19793 462 aa13.82□□□□□ -0.2
NUCB2-216ENST00000533738 EDNRBP24530 442 aa13.82□□□□□ -0.2
NUCB2-216ENST00000533738 CST5P28325 142 aaPredicted RBP13.82□□□□□ -0.2
NUCB2-216ENST00000533738 GJA9P57773 515 aa13.82□□□□□ -0.2
NUCB2-216ENST00000533738 RTP1P59025 263 aa13.82□□□□□ -0.2
NUCB2-216ENST00000533738 TNFAIP2Q03169 654 aa13.82□□□□□ -0.2
NUCB2-216ENST00000533738 SNX17Q15036 470 aa13.82□□□□□ -0.2
NUCB2-216ENST00000533738 TMEM63BQ5T3F8 832 aa13.82□□□□□ -0.2
NUCB2-216ENST00000533738 SLC39A5Q6ZMH5 540 aa13.82□□□□□ -0.2
NUCB2-216ENST00000533738 MCF2L2Q86YR7 1114 aa13.82□□□□□ -0.2
NUCB2-216ENST00000533738 RAB11FIP4Q86YS3 637 aa13.82□□□□□ -0.2
NUCB2-216ENST00000533738 TMTC2Q8N394 836 aa13.82□□□□□ -0.2
NUCB2-216ENST00000533738 DNERQ8NFT8 737 aa13.82□□□□□ -0.2
NUCB2-216ENST00000533738 CTCFLQ8NI51 663 aaPredicted RBP13.82□□□□□ -0.2
NUCB2-216ENST00000533738 SYTL5Q8TDW5 730 aaPredicted RBP13.82□□□□□ -0.2
NUCB2-216ENST00000533738 TCEANC2Q96MN5 208 aa13.82□□□□□ -0.2
NUCB2-216ENST00000533738 MAF1Q9H063 256 aa13.82□□□□□ -0.2
NUCB2-216ENST00000533738 GNEQ9Y223 722 aaKnown RBP13.82□□□□□ -0.2
NUCB2-216ENST00000533738 CTAGE5O15320 804 aa13.81□□□□□ -0.2
NUCB2-216ENST00000533738 PLEKHA8P1O95397 391 aa13.81□□□□□ -0.2
NUCB2-216ENST00000533738 C6orf222P0C671 652 aaPredicted RBP13.81□□□□□ -0.2
NUCB2-216ENST00000533738 KIF5BP33176 963 aa13.81□□□□□ -0.2
NUCB2-216ENST00000533738 HSPA4P34932 840 aa13.81□□□□□ -0.2
NUCB2-216ENST00000533738 ACLYP53396 1101 aa13.81□□□□□ -0.2
NUCB2-216ENST00000533738 EXOSC10Q01780 885 aaKnown RBP13.81□□□□□ -0.2
NUCB2-216ENST00000533738 PDE4DQ08499 809 aa13.81□□□□□ -0.2
NUCB2-216ENST00000533738 KRT32Q14532 448 aa13.81□□□□□ -0.2
NUCB2-216ENST00000533738 KCNA10Q16322 511 aa13.81□□□□□ -0.2
NUCB2-216ENST00000533738 HABP4Q5JVS0 413 aaKnown RBP13.81□□□□□ -0.2
NUCB2-216ENST00000533738 TLK2Q86UE8 772 aa13.81□□□□□ -0.2
NUCB2-216ENST00000533738 PIBF1Q8WXW3 757 aa13.81□□□□□ -0.2
NUCB2-216ENST00000533738 KCNB2Q92953 911 aa13.81□□□□□ -0.2
NUCB2-216ENST00000533738 TAAR1Q96RJ0 339 aa13.81□□□□□ -0.2
NUCB2-216ENST00000533738 TSEN34Q9BSV6 310 aaKnown RBP13.81□□□□□ -0.2
NUCB2-216ENST00000533738 SPZ1Q9BXG8 430 aa13.81□□□□□ -0.2
NUCB2-216ENST00000533738 PRO3102Q9H379 93 aa13.81□□□□□ -0.2
NUCB2-216ENST00000533738 ATP11BQ9Y2G3 1177 aa13.81□□□□□ -0.2
NUCB2-216ENST00000533738 PCDHA1Q9Y5I3 950 aa13.81□□□□□ -0.2
NUCB2-216ENST00000533738 PNMA6FA0A0J9YX94 578 aa13.8□□□□□ -0.2
NUCB2-216ENST00000533738 MOXD2PA6NHM9 499 aa13.8□□□□□ -0.2
NUCB2-216ENST00000533738 CFBP00751 764 aa13.8□□□□□ -0.2
NUCB2-216ENST00000533738 HSD17B4P51659 736 aa13.8□□□□□ -0.2
NUCB2-216ENST00000533738 NKX3-2P78367 333 aa13.8□□□□□ -0.2
NUCB2-216ENST00000533738 BEX3Q00994 111 aa13.8□□□□□ -0.2
NUCB2-216ENST00000533738 GHRHRQ02643 423 aa13.8□□□□□ -0.2
NUCB2-216ENST00000533738 TRIM60Q495X7 471 aa13.8□□□□□ -0.2
NUCB2-216ENST00000533738 C1orf53Q5VUE5 145 aa13.8□□□□□ -0.2
NUCB2-216ENST00000533738 IQSEC1Q6DN90 963 aa13.8□□□□□ -0.2
NUCB2-216ENST00000533738 NOL8Q76FK4 1167 aaKnown RBP13.8□□□□□ -0.2
NUCB2-216ENST00000533738 DHX32Q7L7V1 743 aaKnown RBP13.8□□□□□ -0.2
NUCB2-216ENST00000533738 SGMS1Q86VZ5 419 aa13.8□□□□□ -0.2
NUCB2-216ENST00000533738 SPC25Q9HBM1 224 aa13.8□□□□□ -0.2
NUCB2-216ENST00000533738 RBM27Q9P2N5 1060 aaKnown RBP13.8□□□□□ -0.2
NUCB2-216ENST00000533738 SNX14Q9Y5W7 946 aa13.8□□□□□ -0.2
NUCB2-216ENST00000533738 SLC12A7Q9Y666 1083 aa13.8□□□□□ -0.2
NUCB2-216ENST00000533738 RBM47A0AV96 593 aaKnown RBP13.79□□□□□ -0.2
NUCB2-216ENST00000533738 REC8O95072 547 aa13.79□□□□□ -0.2
NUCB2-216ENST00000533738 CALM1P0DP23 149 aa13.79□□□□□ -0.2
NUCB2-216ENST00000533738 CALM2P0DP24 149 aa13.79□□□□□ -0.2
NUCB2-216ENST00000533738 CALM3P0DP25 149 aa13.79□□□□□ -0.2
NUCB2-216ENST00000533738 CPA1P15085 419 aa13.79□□□□□ -0.2
NUCB2-216ENST00000533738 APOA5Q6Q788 366 aa13.79□□□□□ -0.2
NUCB2-216ENST00000533738 MICU3Q86XE3 530 aa13.79□□□□□ -0.2
NUCB2-216ENST00000533738 CMTR1Q8N1G2 835 aaKnown RBP13.79□□□□□ -0.2
NUCB2-216ENST00000533738 SRBD1Q8N5C6 995 aaKnown RBP13.79□□□□□ -0.2
NUCB2-216ENST00000533738 MPHOSPH6Q99547 160 aaKnown RBP13.79□□□□□ -0.2
NUCB2-216ENST00000533738 LZTS2Q9BRK4 669 aa13.79□□□□□ -0.2
NUCB2-216ENST00000533738 BRPF3Q9ULD4 1205 aa13.79□□□□□ -0.2
NUCB2-216ENST00000533738 DYNC1LI2O43237 492 aaPredicted RBP13.78□□□□□ -0.2
NUCB2-216ENST00000533738 ASGR1P07306 291 aa13.78□□□□□ -0.2
NUCB2-216ENST00000533738 EIF2AK2P19525 551 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms