RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 CTU1Q7Z7A3 348 aaKnown RBP15.39■□□□□ 0.05
TRAPPC4-214ENST00000533632 RIOX2Q8IUF8 465 aa15.39■□□□□ 0.05
TRAPPC4-214ENST00000533632 RNF146Q9NTX7 359 aa15.39■□□□□ 0.05
TRAPPC4-214ENST00000533632 ABCB11O95342 1321 aa15.39■□□□□ 0.05
TRAPPC4-214ENST00000533632 ZNF236Q9UL36 1845 aa15.39■□□□□ 0.05
TRAPPC4-214ENST00000533632 SMCO2A6NFE2 343 aa15.39■□□□□ 0.05
TRAPPC4-214ENST00000533632 M0R2N6 131 aa15.39■□□□□ 0.05
TRAPPC4-214ENST00000533632 NLRP5P59047 1200 aa15.39■□□□□ 0.05
TRAPPC4-214ENST00000533632 CSPP1Q1MSJ5 1256 aa15.39■□□□□ 0.05
TRAPPC4-214ENST00000533632 CCDC148Q8NFR7 591 aa15.39■□□□□ 0.05
TRAPPC4-214ENST00000533632 RASGRP4Q8TDF6 673 aa15.39■□□□□ 0.05
TRAPPC4-214ENST00000533632 TRERF1Q96PN7 1200 aa15.39■□□□□ 0.05
TRAPPC4-214ENST00000533632 MYH15Q9Y2K3 1946 aa15.39■□□□□ 0.05
TRAPPC4-214ENST00000533632 TRIM17Q9Y577 477 aa15.39■□□□□ 0.05
TRAPPC4-214ENST00000533632 BTBD18B2RXH4 712 aa15.38■□□□□ 0.05
TRAPPC4-214ENST00000533632 H3BQV1 296 aa15.38■□□□□ 0.05
TRAPPC4-214ENST00000533632 MEIS2O14770 477 aa15.38■□□□□ 0.05
TRAPPC4-214ENST00000533632 ERCC3P19447 782 aa15.38■□□□□ 0.05
TRAPPC4-214ENST00000533632 NR5A1Q13285 461 aa15.38■□□□□ 0.05
TRAPPC4-214ENST00000533632 TRIM29Q14134 588 aa15.38■□□□□ 0.05
TRAPPC4-214ENST00000533632 UBE2SQ16763 222 aa15.38■□□□□ 0.05
TRAPPC4-214ENST00000533632 IFFO2Q5TF58 517 aa15.38■□□□□ 0.05
TRAPPC4-214ENST00000533632 FOXD4L5Q5VV16 416 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC4-214ENST00000533632 USP17L6PQ6QN14 398 aa15.38■□□□□ 0.05
TRAPPC4-214ENST00000533632 DIS3L2Q8IYB7 885 aaKnown RBP15.38■□□□□ 0.05
TRAPPC4-214ENST00000533632 FOXD4L4Q8WXT5 416 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC4-214ENST00000533632 TNFRSF25Q93038 417 aa15.38■□□□□ 0.05
TRAPPC4-214ENST00000533632 ZSCAN16Q9H4T2 348 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC4-214ENST00000533632 RIC8AQ9NPQ8 531 aa15.38■□□□□ 0.05
TRAPPC4-214ENST00000533632 GJD2Q9UKL4 321 aa15.38■□□□□ 0.05
TRAPPC4-214ENST00000533632 GABRQQ9UN88 632 aa15.38■□□□□ 0.05
TRAPPC4-214ENST00000533632 XBP1P17861 261 aa15.37■□□□□ 0.05
TRAPPC4-214ENST00000533632 HOXA13P31271 388 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC4-214ENST00000533632 ADCY7P51828 1080 aa15.37■□□□□ 0.05
TRAPPC4-214ENST00000533632 FCGRTP55899 365 aa15.37■□□□□ 0.05
TRAPPC4-214ENST00000533632 EARS2Q5JPH6 523 aaKnown RBP15.37■□□□□ 0.05
TRAPPC4-214ENST00000533632 GPR142Q7Z601 462 aa15.37■□□□□ 0.05
TRAPPC4-214ENST00000533632 FERMT3Q86UX7 667 aa15.37■□□□□ 0.05
TRAPPC4-214ENST00000533632 DAGLBQ8NCG7 672 aa15.37■□□□□ 0.05
TRAPPC4-214ENST00000533632 CCDC12Q8WUD4 166 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC4-214ENST00000533632 PSTPIP2Q9H939 334 aa15.37■□□□□ 0.05
TRAPPC4-214ENST00000533632 TMEM260Q9NX78 707 aa15.37■□□□□ 0.05
TRAPPC4-214ENST00000533632 PCDHA4Q9UN74 947 aa15.37■□□□□ 0.05
TRAPPC4-214ENST00000533632 MRPL11Q9Y3B7 192 aaKnown RBP15.37■□□□□ 0.05
TRAPPC4-214ENST00000533632 PLXNA1Q9UIW2 1896 aa15.37■□□□□ 0.05
TRAPPC4-214ENST00000533632 MYH7BA7E2Y1 1941 aa15.37■□□□□ 0.05
TRAPPC4-214ENST00000533632 FAM205CA6NFA0 338 aa15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 MAPK4P31152 587 aa15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 CLK2P49760 499 aaKnown RBP15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 PRKCZQ05513 592 aa15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 KIF22Q14807 665 aa15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 NCAPG2Q86XI2 1143 aa15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 BLIDQ8IZY5 108 aa15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 FAM177A1Q8N128 213 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 SHCBP1Q8NEM2 672 aa15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 LMBRD1Q9NUN5 540 aa15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 SRRDQ9UH36 339 aa15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 TNPO2O14787 897 aaKnown RBP15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 CCNA1P78396 465 aa15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 GHRHRQ02643 423 aa15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 TRAF1Q13077 416 aa15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 TKFCQ3LXA3 575 aa15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 MORN1Q5T089 497 aa15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 SLC30A10Q6XR72 485 aa15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 TMEM87AQ8NBN3 555 aa15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 USP6NLQ92738 828 aa15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 CUL5Q93034 780 aa15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 MCOLN1Q9GZU1 580 aa15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 ACAD9Q9H845 621 aa15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 C6orf50Q9HD87 102 aa15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 A1CFQ9NQ94 594 aaKnown RBP15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 COL20A1Q9P218 1284 aa15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 BIN2Q9UBW5 565 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 PNMA2Q9UL42 364 aa15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 PCDHA6Q9UN73 950 aa15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 PTPN22Q9Y2R2 807 aa15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 PCDHA8Q9Y5H6 950 aa15.36■□□□□ 0.05
TRAPPC4-214ENST00000533632 PIK3CDO00329 1044 aa15.35■□□□□ 0.05
TRAPPC4-214ENST00000533632 CFBP00751 764 aa15.35■□□□□ 0.05
TRAPPC4-214ENST00000533632 GNRH1P01148 92 aa15.35■□□□□ 0.05
TRAPPC4-214ENST00000533632 U2AF2P26368 475 aaKnown RBP eCLIP15.35■□□□□ 0.05
TRAPPC4-214ENST00000533632 CALML3P27482 149 aa15.35■□□□□ 0.05
TRAPPC4-214ENST00000533632 KRT2P35908 639 aa15.35■□□□□ 0.05
TRAPPC4-214ENST00000533632 HSD17B4P51659 736 aa15.35■□□□□ 0.05
TRAPPC4-214ENST00000533632 RESTQ13127 1097 aa15.35■□□□□ 0.05
TRAPPC4-214ENST00000533632 KLHL40Q2TBA0 621 aa15.35■□□□□ 0.05
TRAPPC4-214ENST00000533632 CHST13Q8NET6 341 aa15.35■□□□□ 0.05
TRAPPC4-214ENST00000533632 PGBD1Q96JS3 809 aa15.35■□□□□ 0.05
TRAPPC4-214ENST00000533632 PURBQ96QR8 312 aaKnown RBP15.35■□□□□ 0.05
TRAPPC4-214ENST00000533632 SLC25A27O95847 323 aa15.34■□□□□ 0.05
TRAPPC4-214ENST00000533632 GNA11P29992 359 aa15.34■□□□□ 0.05
TRAPPC4-214ENST00000533632 FLT3LGP49771 235 aa15.34■□□□□ 0.05
TRAPPC4-214ENST00000533632 RPS6P62753 249 aaKnown RBP15.34■□□□□ 0.05
TRAPPC4-214ENST00000533632 JAKMIP3Q5VZ66 844 aa15.34■□□□□ 0.05
TRAPPC4-214ENST00000533632 GALNT17Q6IS24 598 aa15.34■□□□□ 0.05
TRAPPC4-214ENST00000533632 NSMFQ6X4W1 530 aa15.34■□□□□ 0.05
TRAPPC4-214ENST00000533632 PLEKHH3Q7Z736 793 aa15.34■□□□□ 0.05
TRAPPC4-214ENST00000533632 REXO1Q8N1G1 1221 aaKnown RBP15.34■□□□□ 0.05
TRAPPC4-214ENST00000533632 CHAMP1Q96JM3 812 aa15.34■□□□□ 0.05
TRAPPC4-214ENST00000533632 PTCH2Q9Y6C5 1203 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms