RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 CHD9Q3L8U1 2897 aa10.96□□□□□ -0.66
NEDD8-206ENST00000531430 ZNF536O15090 1300 aa10.95□□□□□ -0.66
NEDD8-206ENST00000531430 TNKSO95271 1327 aa10.95□□□□□ -0.66
NEDD8-206ENST00000531430 PTPDC1A2A3K4 754 aa10.95□□□□□ -0.66
NEDD8-206ENST00000531430 TSPY2A6NKD2 308 aa10.95□□□□□ -0.66
NEDD8-206ENST00000531430 SLC16A2P36021 539 aa10.95□□□□□ -0.66
NEDD8-206ENST00000531430 BAATQ14032 418 aaPredicted RBP10.95□□□□□ -0.66
NEDD8-206ENST00000531430 BRDTQ58F21 947 aaPredicted RBP10.95□□□□□ -0.66
NEDD8-206ENST00000531430 SEC62Q99442 399 aaKnown RBP10.95□□□□□ -0.66
NEDD8-206ENST00000531430 ZBED2Q9BTP6 218 aa10.95□□□□□ -0.66
NEDD8-206ENST00000531430 SEZ6LQ9BYH1 1024 aa10.95□□□□□ -0.66
NEDD8-206ENST00000531430 EPB41L4AQ9HCS5 686 aaPredicted RBP10.95□□□□□ -0.66
NEDD8-206ENST00000531430 TOMM22Q9NS69 142 aa10.95□□□□□ -0.66
NEDD8-206ENST00000531430 POLR3EQ9NVU0 708 aa10.95□□□□□ -0.66
NEDD8-206ENST00000531430 CYP39A1Q9NYL5 469 aa10.95□□□□□ -0.66
NEDD8-206ENST00000531430 ADD3Q9UEY8 706 aaKnown RBP10.95□□□□□ -0.66
NEDD8-206ENST00000531430 PRRC2BQ5JSZ5 2229 aaKnown RBP10.94□□□□□ -0.66
NEDD8-206ENST00000531430 MYH4Q9Y623 1939 aa10.94□□□□□ -0.66
NEDD8-206ENST00000531430 GBF1Q92538 1859 aa10.94□□□□□ -0.66
NEDD8-206ENST00000531430 ERC2O15083 957 aa10.94□□□□□ -0.66
NEDD8-206ENST00000531430 RANBP6O60518 1105 aaKnown RBP10.94□□□□□ -0.66
NEDD8-206ENST00000531430 NMT2O60551 498 aa10.94□□□□□ -0.66
NEDD8-206ENST00000531430 ZFYP08048 801 aaPredicted RBP10.94□□□□□ -0.66
NEDD8-206ENST00000531430 CALML3P27482 149 aa10.94□□□□□ -0.66
NEDD8-206ENST00000531430 CPT1AP50416 773 aa10.94□□□□□ -0.66
NEDD8-206ENST00000531430 NKX3-2P78367 333 aa10.94□□□□□ -0.66
NEDD8-206ENST00000531430 CTDSPL2Q05D32 466 aa10.94□□□□□ -0.66
NEDD8-206ENST00000531430 PPARAQ07869 468 aa10.94□□□□□ -0.66
NEDD8-206ENST00000531430 LRRFIP1Q32MZ4 808 aaKnown RBP10.94□□□□□ -0.66
NEDD8-206ENST00000531430 NBPF20Q3BBV1 942 aa10.94□□□□□ -0.66
NEDD8-206ENST00000531430 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.94□□□□□ -0.66
NEDD8-206ENST00000531430 HLA-CQ95604 372 aa10.94□□□□□ -0.66
NEDD8-206ENST00000531430 GMCL1Q96IK5 515 aa10.94□□□□□ -0.66
NEDD8-206ENST00000531430 MTG1Q9BT17 334 aaPredicted RBP10.94□□□□□ -0.66
NEDD8-206ENST00000531430 LRFN3Q9BTN0 628 aa10.94□□□□□ -0.66
NEDD8-206ENST00000531430 VTA1Q9NP79 307 aa10.94□□□□□ -0.66
NEDD8-206ENST00000531430 GPCPD1Q9NPB8 672 aa10.94□□□□□ -0.66
NEDD8-206ENST00000531430 Q9Y3F1 56 aa10.94□□□□□ -0.66
NEDD8-206ENST00000531430 HCN4Q9Y3Q4 1203 aa10.94□□□□□ -0.66
NEDD8-206ENST00000531430 EPOPA6NHQ4 379 aa10.93□□□□□ -0.66
NEDD8-206ENST00000531430 TLL1O43897 1013 aa10.93□□□□□ -0.66
NEDD8-206ENST00000531430 PFKMP08237 780 aa10.93□□□□□ -0.66
NEDD8-206ENST00000531430 KCNJ6P48051 423 aa10.93□□□□□ -0.66
NEDD8-206ENST00000531430 PDE4DQ08499 809 aa10.93□□□□□ -0.66
NEDD8-206ENST00000531430 DUSP28Q4G0W2 176 aa10.93□□□□□ -0.66
NEDD8-206ENST00000531430 RRP12Q5JTH9 1297 aaKnown RBP10.93□□□□□ -0.66
NEDD8-206ENST00000531430 TMEM31Q5JXX7 168 aa10.93□□□□□ -0.66
NEDD8-206ENST00000531430 TTBK2Q6IQ55 1244 aa10.93□□□□□ -0.66
NEDD8-206ENST00000531430 RASGRP2Q7LDG7 609 aa10.93□□□□□ -0.66
NEDD8-206ENST00000531430 FSD1Q9BTV5 496 aa10.93□□□□□ -0.66
NEDD8-206ENST00000531430 COG5Q9UP83 839 aa10.93□□□□□ -0.66
NEDD8-206ENST00000531430 MUC3AQ02505 3323 aa10.92□□□□□ -0.66
NEDD8-206ENST00000531430 FRMPD2Q68DX3 1309 aaPredicted RBP10.92□□□□□ -0.66
NEDD8-206ENST00000531430 FAM86C2PA6NEL3 165 aa10.92□□□□□ -0.66
NEDD8-206ENST00000531430 IQCF3P0C7M6 154 aa10.92□□□□□ -0.66
NEDD8-206ENST00000531430 ALDH5A1P51649 535 aaPredicted RBP10.92□□□□□ -0.66
NEDD8-206ENST00000531430 PURAQ00577 322 aaKnown RBP10.92□□□□□ -0.66
NEDD8-206ENST00000531430 TAP1Q03518 808 aa10.92□□□□□ -0.66
NEDD8-206ENST00000531430 PPP4R3BQ5MIZ7 849 aa10.92□□□□□ -0.66
NEDD8-206ENST00000531430 TMCO2Q7Z6W1 182 aaPredicted RBP10.92□□□□□ -0.66
NEDD8-206ENST00000531430 HERC6Q8IVU3 1022 aa10.92□□□□□ -0.66
NEDD8-206ENST00000531430 COPS5Q92905 334 aa10.92□□□□□ -0.66
NEDD8-206ENST00000531430 VWCEQ96DN2 955 aa10.92□□□□□ -0.66
NEDD8-206ENST00000531430 CRBNQ96SW2 442 aa10.92□□□□□ -0.66
NEDD8-206ENST00000531430 SLC9A7Q96T83 725 aa10.92□□□□□ -0.66
NEDD8-206ENST00000531430 MTUS1Q9ULD2 1270 aa10.92□□□□□ -0.66
NEDD8-206ENST00000531430 SYNPO2Q9UMS6 1093 aa10.92□□□□□ -0.66
NEDD8-206ENST00000531430 MYH7P12883 1935 aa10.92□□□□□ -0.66
NEDD8-206ENST00000531430 NFIBO00712 420 aa10.91□□□□□ -0.66
NEDD8-206ENST00000531430 ICAM1P05362 532 aa10.91□□□□□ -0.66
NEDD8-206ENST00000531430 GRB10Q13322 594 aa10.91□□□□□ -0.66
NEDD8-206ENST00000531430 BFSP2Q13515 415 aa10.91□□□□□ -0.66
NEDD8-206ENST00000531430 SYDE2Q5VT97 1194 aa10.91□□□□□ -0.66
NEDD8-206ENST00000531430 FAM117BQ6P1L5 589 aa10.91□□□□□ -0.66
NEDD8-206ENST00000531430 RNF207Q6ZRF8 634 aa10.91□□□□□ -0.66
NEDD8-206ENST00000531430 CHST3Q7LGC8 479 aa10.91□□□□□ -0.66
NEDD8-206ENST00000531430 MIER1Q8N108 512 aa10.91□□□□□ -0.66
NEDD8-206ENST00000531430 PHOSPHO2Q8TCD6 241 aa10.91□□□□□ -0.66
NEDD8-206ENST00000531430 UIMC1Q96RL1 719 aa10.91□□□□□ -0.66
NEDD8-206ENST00000531430 MPHOSPH6Q99547 160 aaKnown RBP10.91□□□□□ -0.66
NEDD8-206ENST00000531430 IL17RBQ9NRM6 502 aa10.91□□□□□ -0.66
NEDD8-206ENST00000531430 CHD7Q9P2D1 2997 aa10.91□□□□□ -0.66
NEDD8-206ENST00000531430 RAD50Q92878 1312 aa10.9□□□□□ -0.66
NEDD8-206ENST00000531430 PLA2G6O60733 806 aa10.9□□□□□ -0.66
NEDD8-206ENST00000531430 ARHGEF15O94989 841 aa10.9□□□□□ -0.66
NEDD8-206ENST00000531430 TXNP10599 105 aaKnown RBP10.9□□□□□ -0.66
NEDD8-206ENST00000531430 RFC2P35250 354 aa10.9□□□□□ -0.66
NEDD8-206ENST00000531430 PPP2R5BQ15173 497 aa10.9□□□□□ -0.66
NEDD8-206ENST00000531430 PTGISQ16647 500 aa10.9□□□□□ -0.66
NEDD8-206ENST00000531430 SPRED2Q7Z698 418 aa10.9□□□□□ -0.66
NEDD8-206ENST00000531430 SCN5AQ14524 2016 aa10.89□□□□□ -0.67
NEDD8-206ENST00000531430 KPNA6O60684 536 aa10.89□□□□□ -0.67
NEDD8-206ENST00000531430 POU3F3P20264 500 aaPredicted RBP10.89□□□□□ -0.67
NEDD8-206ENST00000531430 C20orf194Q5TEA3 1177 aa10.89□□□□□ -0.67
NEDD8-206ENST00000531430 SLC30A10Q6XR72 485 aa10.89□□□□□ -0.67
NEDD8-206ENST00000531430 EP400NLQ6ZTU2 488 aa10.89□□□□□ -0.67
NEDD8-206ENST00000531430 SEPT14Q6ZU15 432 aa10.89□□□□□ -0.67
NEDD8-206ENST00000531430 MORC4Q8TE76 937 aa10.89□□□□□ -0.67
NEDD8-206ENST00000531430 DCAF4Q8WV16 495 aa10.89□□□□□ -0.67
NEDD8-206ENST00000531430 KHSRPQ92945 711 aaKnown RBP eCLIP10.89□□□□□ -0.674e-7■■□□□ 13.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms