RNA–Protein interactions for RNA: ENST00000530640.6

CTSB-219, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-219ENST00000530640 SMARCC2Q8TAQ2 1214 aa18.05■□□□□ 0.48
CTSB-219ENST00000530640 CHMP4CQ96CF2 233 aa18.05■□□□□ 0.48
CTSB-219ENST00000530640 GMCL1Q96IK5 515 aa18.05■□□□□ 0.48
CTSB-219ENST00000530640 MAD2L2Q9UI95 211 aa18.05■□□□□ 0.48
CTSB-219ENST00000530640 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.05■□□□□ 0.48
CTSB-219ENST00000530640 PLXNA1Q9UIW2 1896 aa18.05■□□□□ 0.48
CTSB-219ENST00000530640 CCDC196A0A1B0GTZ2 297 aa18.04■□□□□ 0.48
CTSB-219ENST00000530640 TMEM232C9JQI7 657 aa18.04■□□□□ 0.48
CTSB-219ENST00000530640 ATP2A1O14983 1001 aa18.04■□□□□ 0.48
CTSB-219ENST00000530640 DHX16O60231 1041 aaKnown RBP18.04■□□□□ 0.48
CTSB-219ENST00000530640 KIF5BP33176 963 aa18.04■□□□□ 0.48
CTSB-219ENST00000530640 ADD1P35611 737 aaKnown RBP18.04■□□□□ 0.48
CTSB-219ENST00000530640 DDIT3P35638 169 aa18.04■□□□□ 0.48
CTSB-219ENST00000530640 FUT2Q10981 343 aa18.04■□□□□ 0.48
CTSB-219ENST00000530640 TMTC3Q6ZXV5 915 aa18.04■□□□□ 0.48
CTSB-219ENST00000530640 CTCFLQ8NI51 663 aaPredicted RBP18.04■□□□□ 0.48
CTSB-219ENST00000530640 MAML3Q96JK9 1138 aa18.04■□□□□ 0.48
CTSB-219ENST00000530640 SLC38A10Q9HBR0 1119 aa18.04■□□□□ 0.48
CTSB-219ENST00000530640 DAXXQ9UER7 740 aaPredicted RBP18.04■□□□□ 0.48
CTSB-219ENST00000530640 ZNFX1Q9P2E3 1918 aaKnown RBP18.04■□□□□ 0.48
CTSB-219ENST00000530640 PALM3A6NDB9 673 aaPredicted RBP18.04■□□□□ 0.48
CTSB-219ENST00000530640 JAK2O60674 1132 aa18.04■□□□□ 0.48
CTSB-219ENST00000530640 PGK2P07205 417 aa18.04■□□□□ 0.48
CTSB-219ENST00000530640 HSP90AA1P07900 732 aaKnown RBP18.04■□□□□ 0.48
CTSB-219ENST00000530640 ATN1P54259 1190 aaPredicted RBP18.04■□□□□ 0.48
CTSB-219ENST00000530640 ZNF543Q08ER8 600 aa18.04■□□□□ 0.48
CTSB-219ENST00000530640 ASPRV1Q53RT3 343 aa18.04■□□□□ 0.48
CTSB-219ENST00000530640 GJC2Q5T442 439 aaPredicted RBP18.04■□□□□ 0.48
CTSB-219ENST00000530640 Q7L0L9 218 aa18.04■□□□□ 0.48
CTSB-219ENST00000530640 FAM160B2Q86V87 743 aa18.04■□□□□ 0.48
CTSB-219ENST00000530640 DCAF4Q8WV16 495 aa18.04■□□□□ 0.48
CTSB-219ENST00000530640 RAVER2Q9HCJ3 691 aaKnown RBP18.04■□□□□ 0.48
CTSB-219ENST00000530640 MTMR7Q9Y216 660 aa18.04■□□□□ 0.48
CTSB-219ENST00000530640 CNTNAP5Q8WYK1 1306 aa18.03■□□□□ 0.48
CTSB-219ENST00000530640 STK36Q9NRP7 1315 aa18.03■□□□□ 0.48
CTSB-219ENST00000530640 PTPDC1A2A3K4 754 aa18.03■□□□□ 0.48
CTSB-219ENST00000530640 PLEKHA8P1O95397 391 aa18.03■□□□□ 0.48
CTSB-219ENST00000530640 FDX1P10109 184 aa18.03■□□□□ 0.48
CTSB-219ENST00000530640 IFNAR1P17181 557 aa18.03■□□□□ 0.48
CTSB-219ENST00000530640 OAZ1P54368 228 aa18.03■□□□□ 0.48
CTSB-219ENST00000530640 STAG2Q8N3U4 1231 aa18.03■□□□□ 0.48
CTSB-219ENST00000530640 MSL3Q8N5Y2 521 aaKnown RBP18.03■□□□□ 0.48
CTSB-219ENST00000530640 CHURC1Q8WUH1 139 aa18.03■□□□□ 0.48
CTSB-219ENST00000530640 FOXD4L1Q9NU39 408 aa18.03■□□□□ 0.48
CTSB-219ENST00000530640 RIPK3Q9Y572 518 aa18.03■□□□□ 0.48
CTSB-219ENST00000530640 CPLX1O14810 134 aa18.02■□□□□ 0.47
CTSB-219ENST00000530640 CDKL5O76039 1030 aa18.02■□□□□ 0.47
CTSB-219ENST00000530640 PARP1P09874 1014 aaKnown RBP18.02■□□□□ 0.47
CTSB-219ENST00000530640 RARBP10826 455 aa18.02■□□□□ 0.47
CTSB-219ENST00000530640 CCDC96Q2M329 555 aa18.02■□□□□ 0.47
CTSB-219ENST00000530640 SLC35G1Q2M3R5 365 aa18.02■□□□□ 0.47
CTSB-219ENST00000530640 KCTD1Q719H9 257 aa18.02■□□□□ 0.47
CTSB-219ENST00000530640 DDX11Q96FC9 970 aa18.02■□□□□ 0.47
CTSB-219ENST00000530640 ATP11BQ9Y2G3 1177 aa18.02■□□□□ 0.47
CTSB-219ENST00000530640 GNAQP50148 359 aa18.01■□□□□ 0.47
CTSB-219ENST00000530640 HMGN5P82970 282 aaKnown RBP18.01■□□□□ 0.47
CTSB-219ENST00000530640 LRRC41Q15345 812 aa18.01■□□□□ 0.47
CTSB-219ENST00000530640 ZNF792Q3KQV3 632 aa18.01■□□□□ 0.47
CTSB-219ENST00000530640 GPATCH4Q5T3I0 446 aaKnown RBP18.01■□□□□ 0.47
CTSB-219ENST00000530640 ZNF697Q5TEC3 545 aa18.01■□□□□ 0.47
CTSB-219ENST00000530640 CPLX2Q6PUV4 134 aaKnown RBP18.01■□□□□ 0.47
CTSB-219ENST00000530640 RNF180Q86T96 592 aa18.01■□□□□ 0.47
CTSB-219ENST00000530640 SRBD1Q8N5C6 995 aaKnown RBP18.01■□□□□ 0.47
CTSB-219ENST00000530640 SPRYD3Q8NCJ5 442 aa18.01■□□□□ 0.47
CTSB-219ENST00000530640 LZTS2Q9BRK4 669 aa18.01■□□□□ 0.47
CTSB-219ENST00000530640 FBXO40Q9UH90 709 aa18.01■□□□□ 0.47
CTSB-219ENST00000530640 SMC3Q9UQE7 1217 aa18.01■□□□□ 0.47
CTSB-219ENST00000530640 MYH6P13533 1939 aa18■□□□□ 0.47
CTSB-219ENST00000530640 PLA2G6O60733 806 aa18■□□□□ 0.47
CTSB-219ENST00000530640 FDPSP14324 419 aaKnown RBP18■□□□□ 0.47
CTSB-219ENST00000530640 GJB2P29033 226 aa18■□□□□ 0.47
CTSB-219ENST00000530640 PHKBQ93100 1093 aa18■□□□□ 0.47
CTSB-219ENST00000530640 TINF2Q9BSI4 451 aa18■□□□□ 0.47
CTSB-219ENST00000530640 SPZ1Q9BXG8 430 aa18■□□□□ 0.47
CTSB-219ENST00000530640 RNF26Q9BY78 433 aaPredicted RBP18■□□□□ 0.47
CTSB-219ENST00000530640 HOMER2Q9NSB8 354 aa18■□□□□ 0.47
CTSB-219ENST00000530640 PHF24Q9UPV7 400 aa18■□□□□ 0.47
CTSB-219ENST00000530640 FRMPD2Q68DX3 1309 aaPredicted RBP18■□□□□ 0.47
CTSB-219ENST00000530640 KLRF2D3W0D1 207 aa17.99■□□□□ 0.47
CTSB-219ENST00000530640 CYTH3O43739 400 aa17.99■□□□□ 0.47
CTSB-219ENST00000530640 DTNBO60941 627 aa17.99■□□□□ 0.47
CTSB-219ENST00000530640 GOLGA8HP0CJ92 632 aa17.99■□□□□ 0.47
CTSB-219ENST00000530640 SMARCA1P28370 1054 aa17.99■□□□□ 0.47
CTSB-219ENST00000530640 CMTR1Q8N1G2 835 aaKnown RBP17.99■□□□□ 0.47
CTSB-219ENST00000530640 ANKRD35Q8N283 1001 aa17.99■□□□□ 0.47
CTSB-219ENST00000530640 CHST13Q8NET6 341 aa17.99■□□□□ 0.47
CTSB-219ENST00000530640 TSEN34Q9BSV6 310 aaKnown RBP17.99■□□□□ 0.47
CTSB-219ENST00000530640 CNPY2Q9Y2B0 182 aa17.99■□□□□ 0.47
CTSB-219ENST00000530640 COL6A3P12111 3177 aa17.99■□□□□ 0.47
CTSB-219ENST00000530640 AKR1A1P14550 325 aa17.98■□□□□ 0.47
CTSB-219ENST00000530640 ADCYAP1R1P41586 468 aa17.98■□□□□ 0.47
CTSB-219ENST00000530640 SMAD3P84022 425 aaKnown RBP17.98■□□□□ 0.47
CTSB-219ENST00000530640 PRAMEF19Q5SWL8 479 aa17.98■□□□□ 0.47
CTSB-219ENST00000530640 ANO1Q5XXA6 986 aa17.98■□□□□ 0.47
CTSB-219ENST00000530640 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.98■□□□□ 0.47
CTSB-219ENST00000530640 ACAD9Q9H845 621 aa17.98■□□□□ 0.47
CTSB-219ENST00000530640 XPNPEP3Q9NQH7 507 aa17.98■□□□□ 0.47
CTSB-219ENST00000530640 PRR12Q9ULL5 1215 aa17.98■□□□□ 0.47
CTSB-219ENST00000530640 ZNF536O15090 1300 aa17.97■□□□□ 0.47
CTSB-219ENST00000530640 TRIM60Q495X7 471 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms