RNA–Protein interactions for RNA: ENST00000530405.5

PACSIN3-206, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-206ENST00000530405 IKQ13123 557 aaPredicted RBP19.42■□□□□ 0.7
PACSIN3-206ENST00000530405 HERC6Q8IVU3 1022 aa19.42■□□□□ 0.7
PACSIN3-206ENST00000530405 APPBP2Q92624 585 aa19.42■□□□□ 0.7
PACSIN3-206ENST00000530405 C11orf16Q9NQ32 467 aa19.42■□□□□ 0.7
PACSIN3-206ENST00000530405 ISY1Q9ULR0 285 aaKnown RBP19.42■□□□□ 0.7
PACSIN3-206ENST00000530405 ARHGEF15O94989 841 aa19.41■□□□□ 0.7
PACSIN3-206ENST00000530405 TSPY3P0CV98 308 aa19.41■□□□□ 0.7
PACSIN3-206ENST00000530405 TSPY8P0CW00 308 aa19.41■□□□□ 0.7
PACSIN3-206ENST00000530405 MS4A1P11836 297 aa19.41■□□□□ 0.7
PACSIN3-206ENST00000530405 CPT1AP50416 773 aa19.41■□□□□ 0.7
PACSIN3-206ENST00000530405 MUM1L1Q5H9M0 696 aa19.41■□□□□ 0.7
PACSIN3-206ENST00000530405 KBTBD3Q8NAB2 608 aa19.41■□□□□ 0.7
PACSIN3-206ENST00000530405 MTG1Q9BT17 334 aaPredicted RBP19.41■□□□□ 0.7
PACSIN3-206ENST00000530405 ZBTB40Q9NUA8 1239 aa19.41■□□□□ 0.7
PACSIN3-206ENST00000530405 TANC1Q9C0D5 1861 aa19.41■□□□□ 0.7
PACSIN3-206ENST00000530405 SCN10AQ9Y5Y9 1956 aa19.41■□□□□ 0.7
PACSIN3-206ENST00000530405 LOC102724159A0A0B4J2E5 919 aa19.4■□□□□ 0.7
PACSIN3-206ENST00000530405 IQCF3P0C7M6 154 aa19.4■□□□□ 0.7
PACSIN3-206ENST00000530405 GRB10Q13322 594 aa19.4■□□□□ 0.7
PACSIN3-206ENST00000530405 PWP2Q15269 919 aaKnown RBP19.4■□□□□ 0.7
PACSIN3-206ENST00000530405 KHSRPQ92945 711 aaKnown RBP eCLIP19.4■□□□□ 0.7
PACSIN3-206ENST00000530405 WDR11Q9BZH6 1224 aa19.4■□□□□ 0.7
PACSIN3-206ENST00000530405 GPAA1O43292 621 aa19.39■□□□□ 0.69
PACSIN3-206ENST00000530405 LPXNO60711 386 aa19.39■□□□□ 0.69
PACSIN3-206ENST00000530405 BAIAP3O94812 1187 aa19.39■□□□□ 0.69
PACSIN3-206ENST00000530405 APPP05067 770 aa19.39■□□□□ 0.69
PACSIN3-206ENST00000530405 MCCP23508 829 aa19.39■□□□□ 0.69
PACSIN3-206ENST00000530405 TFAP4Q01664 338 aa19.39■□□□□ 0.69
PACSIN3-206ENST00000530405 PDE4BQ07343 736 aa19.39■□□□□ 0.69
PACSIN3-206ENST00000530405 PPP4R3BQ5MIZ7 849 aa19.39■□□□□ 0.69
PACSIN3-206ENST00000530405 RCSD1Q6JBY9 416 aa19.39■□□□□ 0.69
PACSIN3-206ENST00000530405 NFRKBQ6P4R8 1299 aa19.39■□□□□ 0.69
PACSIN3-206ENST00000530405 NSMFQ6X4W1 530 aa19.39■□□□□ 0.69
PACSIN3-206ENST00000530405 RETREG2Q8NC44 543 aa19.39■□□□□ 0.69
PACSIN3-206ENST00000530405 GPHNQ9NQX3 736 aaPredicted RBP19.39■□□□□ 0.69
PACSIN3-206ENST00000530405 LMCD1Q9NZU5 365 aa19.39■□□□□ 0.69
PACSIN3-206ENST00000530405 ADD3Q9UEY8 706 aaKnown RBP19.39■□□□□ 0.69
PACSIN3-206ENST00000530405 PRR12Q9ULL5 1215 aa19.39■□□□□ 0.69
PACSIN3-206ENST00000530405 DDX19BQ9UMR2 479 aa19.39■□□□□ 0.69
PACSIN3-206ENST00000530405 RBM47A0AV96 593 aaKnown RBP19.38■□□□□ 0.69
PACSIN3-206ENST00000530405 PATL2C9JE40 543 aaKnown RBP19.38■□□□□ 0.69
PACSIN3-206ENST00000530405 PI4K2BG5E9Z4 385 aa19.38■□□□□ 0.69
PACSIN3-206ENST00000530405 RNF113AO15541 343 aaKnown RBP19.38■□□□□ 0.69
PACSIN3-206ENST00000530405 ZFYP08048 801 aaPredicted RBP19.38■□□□□ 0.69
PACSIN3-206ENST00000530405 MYL3P08590 195 aa19.38■□□□□ 0.69
PACSIN3-206ENST00000530405 COL4A4P53420 1690 aaPredicted RBP19.38■□□□□ 0.69
PACSIN3-206ENST00000530405 BFSP2Q13515 415 aa19.38■□□□□ 0.69
PACSIN3-206ENST00000530405 NBPF20Q3BBV1 942 aa19.38■□□□□ 0.69
PACSIN3-206ENST00000530405 BRDTQ58F21 947 aaPredicted RBP19.38■□□□□ 0.69
PACSIN3-206ENST00000530405 MUC6Q6W4X9 2439 aa19.38■□□□□ 0.69
PACSIN3-206ENST00000530405 IFNL3Q8IZI9 196 aa19.38■□□□□ 0.69
PACSIN3-206ENST00000530405 PURBQ96QR8 312 aaKnown RBP19.38■□□□□ 0.69
PACSIN3-206ENST00000530405 LRRCC1Q9C099 1032 aa19.38■□□□□ 0.69
PACSIN3-206ENST00000530405 FTOQ9C0B1 505 aaKnown RBP eCLIP19.38■□□□□ 0.69
PACSIN3-206ENST00000530405 ECHDC1Q9NTX5 307 aa19.38■□□□□ 0.69
PACSIN3-206ENST00000530405 CCPG1Q9ULG6 757 aa19.38■□□□□ 0.69
PACSIN3-206ENST00000530405 KPNA6O60684 536 aa19.37■□□□□ 0.69
PACSIN3-206ENST00000530405 ICAM1P05362 532 aa19.37■□□□□ 0.69
PACSIN3-206ENST00000530405 ALDH5A1P51649 535 aaPredicted RBP19.37■□□□□ 0.69
PACSIN3-206ENST00000530405 SNAP25P60880 206 aa19.37■□□□□ 0.69
PACSIN3-206ENST00000530405 PTPN11Q06124 597 aaPredicted RBP19.37■□□□□ 0.69
PACSIN3-206ENST00000530405 FAM47CQ5HY64 1035 aa19.37■□□□□ 0.69
PACSIN3-206ENST00000530405 KCTD1Q719H9 257 aa19.37■□□□□ 0.69
PACSIN3-206ENST00000530405 BRWD1Q9NSI6 2320 aa19.37■□□□□ 0.69
PACSIN3-206ENST00000530405 TET1Q8NFU7 2136 aa19.37■□□□□ 0.69
PACSIN3-206ENST00000530405 RAD50Q92878 1312 aa19.36■□□□□ 0.69
PACSIN3-206ENST00000530405 PTPRSQ13332 1948 aa19.36■□□□□ 0.69
PACSIN3-206ENST00000530405 SLC3A2P08195 630 aaKnown RBP19.36■□□□□ 0.69
PACSIN3-206ENST00000530405 BAATQ14032 418 aaPredicted RBP19.36■□□□□ 0.69
PACSIN3-206ENST00000530405 LRRFIP1Q32MZ4 808 aaKnown RBP19.36■□□□□ 0.69
PACSIN3-206ENST00000530405 OR6J1Q8NGC5 347 aa19.36■□□□□ 0.69
PACSIN3-206ENST00000530405 NACAP1Q9BZK3 213 aa19.36■□□□□ 0.69
PACSIN3-206ENST00000530405 FAM86C2PA6NEL3 165 aa19.35■□□□□ 0.69
PACSIN3-206ENST00000530405 M0R2C6 588 aa19.35■□□□□ 0.69
PACSIN3-206ENST00000530405 NKRFO15226 690 aaKnown RBP eCLIP19.35■□□□□ 0.69
PACSIN3-206ENST00000530405 KCNJ6P48051 423 aa19.35■□□□□ 0.69
PACSIN3-206ENST00000530405 CHMP4CQ96CF2 233 aa19.35■□□□□ 0.69
PACSIN3-206ENST00000530405 CD320Q9NPF0 282 aa19.35■□□□□ 0.69
PACSIN3-206ENST00000530405 STX8Q9UNK0 236 aa19.35■□□□□ 0.69
PACSIN3-206ENST00000530405 A6NJR5 290 aa19.34■□□□□ 0.69
PACSIN3-206ENST00000530405 SPRED2Q7Z698 418 aa19.34■□□□□ 0.69
PACSIN3-206ENST00000530405 RANBP17Q9H2T7 1088 aaKnown RBP19.34■□□□□ 0.69
PACSIN3-206ENST00000530405 CHMP4BQ9H444 224 aaKnown RBP19.34■□□□□ 0.69
PACSIN3-206ENST00000530405 PRR33A8MZF0 331 aa19.33■□□□□ 0.68
PACSIN3-206ENST00000530405 SMARCA5O60264 1052 aaPredicted RBP19.33■□□□□ 0.68
PACSIN3-206ENST00000530405 PPARAQ07869 468 aa19.33■□□□□ 0.68
PACSIN3-206ENST00000530405 PPP2R5BQ15173 497 aa19.33■□□□□ 0.68
PACSIN3-206ENST00000530405 NOD1Q9Y239 953 aa19.33■□□□□ 0.68
PACSIN3-206ENST00000530405 TRIP12Q14669 1992 aaPredicted RBP19.33■□□□□ 0.68
PACSIN3-206ENST00000530405 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.32■□□□□ 0.68
PACSIN3-206ENST00000530405 LCHNA4D1U4 455 aa19.32■□□□□ 0.68
PACSIN3-206ENST00000530405 NFIBO00712 420 aa19.32■□□□□ 0.68
PACSIN3-206ENST00000530405 WDR5P61964 334 aaKnown RBP19.32■□□□□ 0.68
PACSIN3-206ENST00000530405 CCDC155Q8N6L0 562 aa19.32■□□□□ 0.68
PACSIN3-206ENST00000530405 CAGE1Q8TC20 777 aa19.32■□□□□ 0.68
PACSIN3-206ENST00000530405 AFAP1L1Q8TED9 768 aa19.32■□□□□ 0.68
PACSIN3-206ENST00000530405 GDPD5Q8WTR4 605 aa19.32■□□□□ 0.68
PACSIN3-206ENST00000530405 SCFD2Q8WU76 684 aa19.32■□□□□ 0.68
PACSIN3-206ENST00000530405 NAPBQ9H115 298 aa19.32■□□□□ 0.68
PACSIN3-206ENST00000530405 IL17RBQ9NRM6 502 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms