RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 FAM86C2PA6NEL3 165 aa13.44□□□□□ -0.26
SF3B2-208ENST00000529994 M0R2C6 588 aa13.44□□□□□ -0.26
SF3B2-208ENST00000529994 GPAA1O43292 621 aa13.44□□□□□ -0.26
SF3B2-208ENST00000529994 TLL1O43897 1013 aa13.44□□□□□ -0.26
SF3B2-208ENST00000529994 FDX1P10109 184 aa13.44□□□□□ -0.26
SF3B2-208ENST00000529994 TFAP4Q01664 338 aa13.44□□□□□ -0.26
SF3B2-208ENST00000529994 TKFCQ3LXA3 575 aa13.44□□□□□ -0.26
SF3B2-208ENST00000529994 FAM47CQ5HY64 1035 aa13.44□□□□□ -0.26
SF3B2-208ENST00000529994 TSHZ3Q63HK5 1081 aa13.44□□□□□ -0.26
SF3B2-208ENST00000529994 SPRED2Q7Z698 418 aa13.44□□□□□ -0.26
SF3B2-208ENST00000529994 FAM160B2Q86V87 743 aa13.44□□□□□ -0.26
SF3B2-208ENST00000529994 NEDD1Q8NHV4 660 aa13.44□□□□□ -0.26
SF3B2-208ENST00000529994 APPBP2Q92624 585 aa13.44□□□□□ -0.26
SF3B2-208ENST00000529994 KHSRPQ92945 711 aaKnown RBP eCLIP13.44□□□□□ -0.26
SF3B2-208ENST00000529994 SEZ6LQ9BYH1 1024 aa13.44□□□□□ -0.26
SF3B2-208ENST00000529994 ZNF287Q9HBT7 754 aa13.44□□□□□ -0.26
SF3B2-208ENST00000529994 Q9Y3F1 56 aa13.44□□□□□ -0.26
SF3B2-208ENST00000529994 PCDHB15Q9Y5E8 787 aa13.44□□□□□ -0.26
SF3B2-208ENST00000529994 PTPRSQ13332 1948 aa13.43□□□□□ -0.26
SF3B2-208ENST00000529994 RNF113AO15541 343 aaKnown RBP13.43□□□□□ -0.26
SF3B2-208ENST00000529994 PFKMP08237 780 aa13.43□□□□□ -0.26
SF3B2-208ENST00000529994 SUPT20HL2P0C7V6 817 aa13.43□□□□□ -0.26
SF3B2-208ENST00000529994 ACTN1P12814 892 aa13.43□□□□□ -0.26
SF3B2-208ENST00000529994 POU3F3P20264 500 aaPredicted RBP13.43□□□□□ -0.26
SF3B2-208ENST00000529994 PURAQ00577 322 aaKnown RBP13.43□□□□□ -0.26
SF3B2-208ENST00000529994 TAP1Q03518 808 aa13.43□□□□□ -0.26
SF3B2-208ENST00000529994 TMEM31Q5JXX7 168 aa13.43□□□□□ -0.26
SF3B2-208ENST00000529994 IFNL3Q8IZI9 196 aa13.43□□□□□ -0.26
SF3B2-208ENST00000529994 KBTBD3Q8NAB2 608 aa13.43□□□□□ -0.26
SF3B2-208ENST00000529994 WDR11Q9BZH6 1224 aa13.43□□□□□ -0.26
SF3B2-208ENST00000529994 FTOQ9C0B1 505 aaKnown RBP eCLIP13.43□□□□□ -0.26
SF3B2-208ENST00000529994 VTA1Q9NP79 307 aa13.43□□□□□ -0.26
SF3B2-208ENST00000529994 CCPG1Q9ULG6 757 aa13.43□□□□□ -0.26
SF3B2-208ENST00000529994 PRR12Q9ULL5 1215 aa13.43□□□□□ -0.26
SF3B2-208ENST00000529994 SYNPO2Q9UMS6 1093 aa13.43□□□□□ -0.26
SF3B2-208ENST00000529994 COG5Q9UP83 839 aa13.43□□□□□ -0.26
SF3B2-208ENST00000529994 COL4A4P53420 1690 aaPredicted RBP13.43□□□□□ -0.26
SF3B2-208ENST00000529994 TANC1Q9C0D5 1861 aa13.42□□□□□ -0.26
SF3B2-208ENST00000529994 SCN10AQ9Y5Y9 1956 aa13.42□□□□□ -0.26
SF3B2-208ENST00000529994 RBAK-RBAKDNI3L0D1 243 aa13.42□□□□□ -0.26
SF3B2-208ENST00000529994 NMT2O60551 498 aa13.42□□□□□ -0.26
SF3B2-208ENST00000529994 CHMP4BP1P59074 171 aa13.42□□□□□ -0.26
SF3B2-208ENST00000529994 GRB10Q13322 594 aa13.42□□□□□ -0.26
SF3B2-208ENST00000529994 BAATQ14032 418 aaPredicted RBP13.42□□□□□ -0.26
SF3B2-208ENST00000529994 NBPF20Q3BBV1 942 aa13.42□□□□□ -0.26
SF3B2-208ENST00000529994 DUSP28Q4G0W2 176 aa13.42□□□□□ -0.26
SF3B2-208ENST00000529994 HERC6Q8IVU3 1022 aa13.42□□□□□ -0.26
SF3B2-208ENST00000529994 HLA-CQ95604 372 aa13.42□□□□□ -0.26
SF3B2-208ENST00000529994 GMCL1Q96IK5 515 aa13.42□□□□□ -0.26
SF3B2-208ENST00000529994 SLC9A7Q96T83 725 aa13.42□□□□□ -0.26
SF3B2-208ENST00000529994 DCTPP1Q9H773 170 aa13.42□□□□□ -0.26
SF3B2-208ENST00000529994 GPHNQ9NQX3 736 aaPredicted RBP13.42□□□□□ -0.26
SF3B2-208ENST00000529994 ECHDC1Q9NTX5 307 aa13.42□□□□□ -0.26
SF3B2-208ENST00000529994 POLR3EQ9NVU0 708 aa13.42□□□□□ -0.26
SF3B2-208ENST00000529994 STX8Q9UNK0 236 aa13.42□□□□□ -0.26
SF3B2-208ENST00000529994 PLIN4Q96Q06 1357 aa13.42□□□□□ -0.26
SF3B2-208ENST00000529994 MUC6Q6W4X9 2439 aa13.41□□□□□ -0.26
SF3B2-208ENST00000529994 PATL2C9JE40 543 aaKnown RBP13.41□□□□□ -0.26
SF3B2-208ENST00000529994 IQCF3P0C7M6 154 aa13.41□□□□□ -0.26
SF3B2-208ENST00000529994 GNAT2P19087 354 aa13.41□□□□□ -0.26
SF3B2-208ENST00000529994 PDE4BQ07343 736 aa13.41□□□□□ -0.26
SF3B2-208ENST00000529994 RCSD1Q6JBY9 416 aa13.41□□□□□ -0.26
SF3B2-208ENST00000529994 TMCO2Q7Z6W1 182 aaPredicted RBP13.41□□□□□ -0.26
SF3B2-208ENST00000529994 RETREG2Q8NC44 543 aa13.41□□□□□ -0.26
SF3B2-208ENST00000529994 OR6J1Q8NGC5 347 aa13.41□□□□□ -0.26
SF3B2-208ENST00000529994 GPATCH3Q96I76 525 aa13.41□□□□□ -0.26
SF3B2-208ENST00000529994 SEC62Q99442 399 aaKnown RBP13.41□□□□□ -0.26
SF3B2-208ENST00000529994 MTG1Q9BT17 334 aaPredicted RBP13.41□□□□□ -0.26
SF3B2-208ENST00000529994 C11orf16Q9NQ32 467 aa13.41□□□□□ -0.26
SF3B2-208ENST00000529994 INCENPQ9NQS7 918 aa13.41□□□□□ -0.26
SF3B2-208ENST00000529994 LCHNA4D1U4 455 aa13.4□□□□□ -0.26
SF3B2-208ENST00000529994 KIF28PB7ZC32 967 aa13.4□□□□□ -0.26
SF3B2-208ENST00000529994 NFIBO00712 420 aa13.4□□□□□ -0.26
SF3B2-208ENST00000529994 LPXNO60711 386 aa13.4□□□□□ -0.26
SF3B2-208ENST00000529994 CPT1AP50416 773 aa13.4□□□□□ -0.26
SF3B2-208ENST00000529994 ALDH5A1P51649 535 aaPredicted RBP13.4□□□□□ -0.26
SF3B2-208ENST00000529994 CCDC96Q2M329 555 aa13.4□□□□□ -0.26
SF3B2-208ENST00000529994 PHOSPHO2Q8TCD6 241 aa13.4□□□□□ -0.26
SF3B2-208ENST00000529994 MORC4Q8TE76 937 aa13.4□□□□□ -0.26
SF3B2-208ENST00000529994 GDPD5Q8WTR4 605 aa13.4□□□□□ -0.26
SF3B2-208ENST00000529994 COPS5Q92905 334 aa13.4□□□□□ -0.26
SF3B2-208ENST00000529994 CD320Q9NPF0 282 aa13.4□□□□□ -0.26
SF3B2-208ENST00000529994 PTPDC1A2A3K4 754 aa13.39□□□□□ -0.27
SF3B2-208ENST00000529994 TSPY2A6NKD2 308 aa13.39□□□□□ -0.27
SF3B2-208ENST00000529994 ICAM1P05362 532 aa13.39□□□□□ -0.27
SF3B2-208ENST00000529994 ZFYP08048 801 aaPredicted RBP13.39□□□□□ -0.27
SF3B2-208ENST00000529994 SLC3A2P08195 630 aaKnown RBP13.39□□□□□ -0.27
SF3B2-208ENST00000529994 RFC2P35250 354 aa13.39□□□□□ -0.27
SF3B2-208ENST00000529994 SLC16A2P36021 539 aa13.39□□□□□ -0.27
SF3B2-208ENST00000529994 CTDSPL2Q05D32 466 aa13.39□□□□□ -0.27
SF3B2-208ENST00000529994 PPARAQ07869 468 aa13.39□□□□□ -0.27
SF3B2-208ENST00000529994 TTBK2Q6IQ55 1244 aa13.39□□□□□ -0.27
SF3B2-208ENST00000529994 SLC30A10Q6XR72 485 aa13.39□□□□□ -0.27
SF3B2-208ENST00000529994 NACAP1Q9BZK3 213 aa13.39□□□□□ -0.27
SF3B2-208ENST00000529994 NAPBQ9H115 298 aa13.39□□□□□ -0.27
SF3B2-208ENST00000529994 IL17RBQ9NRM6 502 aa13.39□□□□□ -0.27
SF3B2-208ENST00000529994 ADD3Q9UEY8 706 aaKnown RBP13.39□□□□□ -0.27
SF3B2-208ENST00000529994 ZBTB47Q9UFB7 747 aaPredicted RBP13.39□□□□□ -0.27
SF3B2-208ENST00000529994 MTUS1Q9ULD2 1270 aa13.39□□□□□ -0.27
SF3B2-208ENST00000529994 NOD1Q9Y239 953 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms