RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 GLDCP23378 1020 aa6.93□□□□□ -1.3
C11orf88-204ENST00000529661 VIPR1P32241 457 aa6.93□□□□□ -1.3
C11orf88-204ENST00000529661 DLG4P78352 724 aa6.93□□□□□ -1.3
C11orf88-204ENST00000529661 DDR2Q16832 855 aa6.93□□□□□ -1.3
C11orf88-204ENST00000529661 CCDC144BQ3MJ40 725 aa6.93□□□□□ -1.3
C11orf88-204ENST00000529661 OLFML2BQ68BL8 750 aa6.93□□□□□ -1.3
C11orf88-204ENST00000529661 NOP9Q86U38 636 aaKnown RBP6.93□□□□□ -1.3
C11orf88-204ENST00000529661 ANKLE2Q86XL3 938 aa6.93□□□□□ -1.3
C11orf88-204ENST00000529661 CILP2Q8IUL8 1156 aa6.93□□□□□ -1.3
C11orf88-204ENST00000529661 TRIM55Q9BYV6 548 aa6.93□□□□□ -1.3
C11orf88-204ENST00000529661 NKX2-4Q9H2Z4 354 aa6.93□□□□□ -1.3
C11orf88-204ENST00000529661 KLHL14Q9P2G3 628 aa6.93□□□□□ -1.3
C11orf88-204ENST00000529661 TRBV23OR9-2A0A075B6M9 112 aa6.92□□□□□ -1.3
C11orf88-204ENST00000529661 TEX51A0A1B0GUA7 166 aa6.92□□□□□ -1.3
C11orf88-204ENST00000529661 NPIPB6E9PJ23 425 aa6.92□□□□□ -1.3
C11orf88-204ENST00000529661 ABLIM1O14639 778 aa6.92□□□□□ -1.3
C11orf88-204ENST00000529661 KLF4O43474 513 aa6.92□□□□□ -1.3
C11orf88-204ENST00000529661 THBDP07204 575 aa6.92□□□□□ -1.3
C11orf88-204ENST00000529661 CORO7P57737 925 aa6.92□□□□□ -1.3
C11orf88-204ENST00000529661 YBX1P67809 324 aaKnown RBP6.92□□□□□ -1.3
C11orf88-204ENST00000529661 TMEM62Q0P6H9 643 aa6.92□□□□□ -1.3
C11orf88-204ENST00000529661 SLC10A6Q3KNW5 377 aa6.92□□□□□ -1.3
C11orf88-204ENST00000529661 NBPF6Q5VWK0 638 aa6.92□□□□□ -1.3
C11orf88-204ENST00000529661 RPTNQ6XPR3 784 aa6.92□□□□□ -1.3
C11orf88-204ENST00000529661 TMC6Q7Z403 805 aa6.92□□□□□ -1.3
C11orf88-204ENST00000529661 CKAP2LQ8IYA6 745 aa6.92□□□□□ -1.3
C11orf88-204ENST00000529661 COPS5Q92905 334 aa6.92□□□□□ -1.3
C11orf88-204ENST00000529661 NBPF4Q96M43 638 aa6.92□□□□□ -1.3
C11orf88-204ENST00000529661 CYP26B1Q9NR63 512 aa6.92□□□□□ -1.3
C11orf88-204ENST00000529661 GULP1Q9UBP9 304 aa6.92□□□□□ -1.3
C11orf88-204ENST00000529661 RWDD3Q9Y3V2 267 aa6.92□□□□□ -1.3
C11orf88-204ENST00000529661 CADPSQ9ULU8 1353 aa6.92□□□□□ -1.3
C11orf88-204ENST00000529661 HRKO00198 91 aa6.91□□□□□ -1.3
C11orf88-204ENST00000529661 AGRPO00253 132 aa6.91□□□□□ -1.3
C11orf88-204ENST00000529661 SNRPB2P08579 225 aaKnown RBP6.91□□□□□ -1.3
C11orf88-204ENST00000529661 MED14OSP0DP75 135 aa6.91□□□□□ -1.3
C11orf88-204ENST00000529661 ECI1P42126 302 aa6.91□□□□□ -1.3
C11orf88-204ENST00000529661 KCNJ6P48051 423 aa6.91□□□□□ -1.3
C11orf88-204ENST00000529661 KCNA10Q16322 511 aa6.91□□□□□ -1.3
C11orf88-204ENST00000529661 GIMAP6Q6P9H5 292 aa6.91□□□□□ -1.3
C11orf88-204ENST00000529661 LZTR1Q8N653 840 aa6.91□□□□□ -1.3
C11orf88-204ENST00000529661 PMFBP1Q8TBY8 1022 aa6.91□□□□□ -1.3
C11orf88-204ENST00000529661 CD320Q9NPF0 282 aa6.91□□□□□ -1.3
C11orf88-204ENST00000529661 SMG5Q9UPR3 1016 aaKnown RBP6.91□□□□□ -1.3
C11orf88-204ENST00000529661 DBHP09172 617 aa6.9□□□□□ -1.3
C11orf88-204ENST00000529661 RAB33AQ14088 237 aa6.9□□□□□ -1.3
C11orf88-204ENST00000529661 PLEKHN1Q494U1 663 aaPredicted RBP6.9□□□□□ -1.3
C11orf88-204ENST00000529661 USP33Q8TEY7 942 aa6.9□□□□□ -1.3
C11orf88-204ENST00000529661 TOX2Q96NM4 488 aa6.9□□□□□ -1.3
C11orf88-204ENST00000529661 EPN3Q9H201 632 aa6.9□□□□□ -1.3
C11orf88-204ENST00000529661 GCM1Q9NP62 436 aa6.9□□□□□ -1.3
C11orf88-204ENST00000529661 MBD1Q9UIS9 605 aaPredicted RBP6.9□□□□□ -1.3
C11orf88-204ENST00000529661 DBR1Q9UK59 544 aaKnown RBP6.9□□□□□ -1.3
C11orf88-204ENST00000529661 ARID1BQ8NFD5 2236 aaPredicted RBP6.89□□□□□ -1.31
C11orf88-204ENST00000529661 C7orf72A4D263 438 aa6.89□□□□□ -1.31
C11orf88-204ENST00000529661 U2SURPO15042 1029 aaKnown RBP6.89□□□□□ -1.31
C11orf88-204ENST00000529661 NPHS1O60500 1241 aa6.89□□□□□ -1.31
C11orf88-204ENST00000529661 CYBBP04839 570 aa6.89□□□□□ -1.31
C11orf88-204ENST00000529661 EPHB3P54753 998 aa6.89□□□□□ -1.31
C11orf88-204ENST00000529661 NR1I3Q14994 352 aa6.89□□□□□ -1.31
C11orf88-204ENST00000529661 SF1Q15637 639 aaKnown RBP6.89□□□□□ -1.31
C11orf88-204ENST00000529661 MBLAC2Q68D91 279 aa6.89□□□□□ -1.31
C11orf88-204ENST00000529661 PAQR3Q6TCH7 311 aa6.89□□□□□ -1.31
C11orf88-204ENST00000529661 CABP7Q86V35 215 aa6.89□□□□□ -1.31
C11orf88-204ENST00000529661 NLGN2Q8NFZ4 835 aa6.89□□□□□ -1.31
C11orf88-204ENST00000529661 FRS2Q8WU20 508 aa6.89□□□□□ -1.31
C11orf88-204ENST00000529661 CNTD2Q9H8S5 307 aa6.89□□□□□ -1.31
C11orf88-204ENST00000529661 RXFP1Q9HBX9 757 aa6.89□□□□□ -1.31
C11orf88-204ENST00000529661 BTG4Q9NY30 223 aa6.89□□□□□ -1.31
C11orf88-204ENST00000529661 FBLN5Q9UBX5 448 aa6.89□□□□□ -1.31
C11orf88-204ENST00000529661 F8W031 263 aaPredicted RBP6.88□□□□□ -1.31
C11orf88-204ENST00000529661 SRGAP3O43295 1099 aa6.88□□□□□ -1.31
C11orf88-204ENST00000529661 HOXC12P31275 282 aa6.88□□□□□ -1.31
C11orf88-204ENST00000529661 MAPKAPK2P49137 400 aa6.88□□□□□ -1.31
C11orf88-204ENST00000529661 LINC00310P59036 64 aa6.88□□□□□ -1.31
C11orf88-204ENST00000529661 CYP4F3Q08477 520 aa6.88□□□□□ -1.31
C11orf88-204ENST00000529661 SERINC3Q13530 473 aa6.88□□□□□ -1.31
C11orf88-204ENST00000529661 CBX2Q14781 532 aaPredicted RBP6.88□□□□□ -1.31
C11orf88-204ENST00000529661 PRSS53Q2L4Q9 553 aa6.88□□□□□ -1.31
C11orf88-204ENST00000529661 ZC3H14Q6PJT7 736 aaKnown RBP6.88□□□□□ -1.31
C11orf88-204ENST00000529661 LRRC56Q8IYG6 542 aaPredicted RBP6.88□□□□□ -1.31
C11orf88-204ENST00000529661 FAM177A1Q8N128 213 aaPredicted RBP6.88□□□□□ -1.31
C11orf88-204ENST00000529661 NPLOC4Q8TAT6 608 aa6.88□□□□□ -1.31
C11orf88-204ENST00000529661 OSBPL2Q9H1P3 480 aa6.88□□□□□ -1.31
C11orf88-204ENST00000529661 PIF1Q9H611 641 aa6.88□□□□□ -1.31
C11orf88-204ENST00000529661 ZSWIM4Q9H7M6 989 aa6.88□□□□□ -1.31
C11orf88-204ENST00000529661 CNOT6Q9ULM6 557 aaKnown RBP6.88□□□□□ -1.31
C11orf88-204ENST00000529661 HCFC2Q9Y5Z7 792 aa6.88□□□□□ -1.31
C11orf88-204ENST00000529661 ZC3H12DA2A288 527 aaKnown RBP6.87□□□□□ -1.31
C11orf88-204ENST00000529661 CCDC85CA6NKD9 419 aa6.87□□□□□ -1.31
C11orf88-204ENST00000529661 SMARCA5O60264 1052 aaPredicted RBP6.87□□□□□ -1.31
C11orf88-204ENST00000529661 NUAK1O60285 661 aa6.87□□□□□ -1.31
C11orf88-204ENST00000529661 PPP1R11O60927 126 aaPredicted RBP6.87□□□□□ -1.31
C11orf88-204ENST00000529661 FUCA1P04066 466 aa6.87□□□□□ -1.31
C11orf88-204ENST00000529661 CFPP27918 469 aa6.87□□□□□ -1.31
C11orf88-204ENST00000529661 GRIA2P42262 883 aa6.87□□□□□ -1.31
C11orf88-204ENST00000529661 CDR1P51861 262 aa6.87□□□□□ -1.31
C11orf88-204ENST00000529661 NCKAP1LP55160 1127 aa6.87□□□□□ -1.31
C11orf88-204ENST00000529661 PPP2R2AP63151 447 aa6.87□□□□□ -1.31
C11orf88-204ENST00000529661 ZNF200P98182 395 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms