RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 XBP1P17861 261 aa15.76■□□□□ 0.11
CD44-224ENST00000526669 PTPREP23469 700 aa15.76■□□□□ 0.11
CD44-224ENST00000526669 FCGRTP55899 365 aa15.76■□□□□ 0.11
CD44-224ENST00000526669 TRIM29Q14134 588 aa15.76■□□□□ 0.11
CD44-224ENST00000526669 USP17L6PQ6QN14 398 aa15.76■□□□□ 0.11
CD44-224ENST00000526669 RNF207Q6ZRF8 634 aa15.76■□□□□ 0.11
CD44-224ENST00000526669 FCHSD1Q86WN1 690 aa15.76■□□□□ 0.11
CD44-224ENST00000526669 CUL5Q93034 780 aa15.76■□□□□ 0.11
CD44-224ENST00000526669 PGBD1Q96JS3 809 aa15.76■□□□□ 0.11
CD44-224ENST00000526669 PSTPIP2Q9H939 334 aa15.76■□□□□ 0.11
CD44-224ENST00000526669 C6orf50Q9HD87 102 aa15.76■□□□□ 0.11
CD44-224ENST00000526669 RIC8AQ9NPQ8 531 aa15.76■□□□□ 0.11
CD44-224ENST00000526669 SH3GLB2Q9NR46 395 aa15.76■□□□□ 0.11
CD44-224ENST00000526669 TMEM260Q9NX78 707 aa15.76■□□□□ 0.11
CD44-224ENST00000526669 KIF3AQ9Y496 699 aa15.76■□□□□ 0.11
CD44-224ENST00000526669 WDR81Q562E7 1941 aa15.75■□□□□ 0.11
CD44-224ENST00000526669 GCOM1H8Y6P7 765 aaPredicted RBP15.75■□□□□ 0.11
CD44-224ENST00000526669 POLR2MP0CAP2 368 aa15.75■□□□□ 0.11
CD44-224ENST00000526669 ADORA2AP29274 412 aa15.75■□□□□ 0.11
CD44-224ENST00000526669 RPS6P62753 249 aaKnown RBP15.75■□□□□ 0.11
CD44-224ENST00000526669 KCTD2Q14681 263 aa15.75■□□□□ 0.11
CD44-224ENST00000526669 JAKMIP3Q5VZ66 844 aa15.75■□□□□ 0.11
CD44-224ENST00000526669 LARP1BQ659C4 914 aaKnown RBP15.75■□□□□ 0.11
CD44-224ENST00000526669 MCF2L2Q86YR7 1114 aa15.75■□□□□ 0.11
CD44-224ENST00000526669 ERO1AQ96HE7 468 aa15.75■□□□□ 0.11
CD44-224ENST00000526669 PHF20Q9BVI0 1012 aa15.75■□□□□ 0.11
CD44-224ENST00000526669 ZMYND12Q9H0C1 365 aa15.75■□□□□ 0.11
CD44-224ENST00000526669 CYP39A1Q9NYL5 469 aa15.75■□□□□ 0.11
CD44-224ENST00000526669 COL20A1Q9P218 1284 aa15.75■□□□□ 0.11
CD44-224ENST00000526669 BIN2Q9UBW5 565 aaPredicted RBP15.75■□□□□ 0.11
CD44-224ENST00000526669 DAXXQ9UER7 740 aaPredicted RBP15.75■□□□□ 0.11
CD44-224ENST00000526669 GABRQQ9UN88 632 aa15.75■□□□□ 0.11
CD44-224ENST00000526669 ESYT2A0FGR8 921 aa15.74■□□□□ 0.11
CD44-224ENST00000526669 VPS37CA5D8V6 355 aaPredicted RBP15.74■□□□□ 0.11
CD44-224ENST00000526669 H3BQV1 296 aa15.74■□□□□ 0.11
CD44-224ENST00000526669 MEIS2O14770 477 aa15.74■□□□□ 0.11
CD44-224ENST00000526669 CNTN2Q02246 1040 aa15.74■□□□□ 0.11
CD44-224ENST00000526669 GRB14Q14449 540 aa15.74■□□□□ 0.11
CD44-224ENST00000526669 NPY5RQ15761 445 aa15.74■□□□□ 0.11
CD44-224ENST00000526669 IFFO2Q5TF58 517 aa15.74■□□□□ 0.11
CD44-224ENST00000526669 OXER1Q8TDS5 423 aa15.74■□□□□ 0.11
CD44-224ENST00000526669 SYTL5Q8TDW5 730 aaPredicted RBP15.74■□□□□ 0.11
CD44-224ENST00000526669 PFASO15067 1338 aa15.73■□□□□ 0.11
CD44-224ENST00000526669 SLC15A5A6NIM6 579 aa15.73■□□□□ 0.11
CD44-224ENST00000526669 POTEB2H3BUK9 544 aa15.73■□□□□ 0.11
CD44-224ENST00000526669 COBLO75128 1261 aa15.73■□□□□ 0.11
CD44-224ENST00000526669 MMP1P03956 469 aa15.73■□□□□ 0.11
CD44-224ENST00000526669 CYP2B6P20813 491 aa15.73■□□□□ 0.11
CD44-224ENST00000526669 KRT2P35908 639 aa15.73■□□□□ 0.11
CD44-224ENST00000526669 HSD17B4P51659 736 aa15.73■□□□□ 0.11
CD44-224ENST00000526669 MRPL12P52815 198 aaKnown RBP15.73■□□□□ 0.11
CD44-224ENST00000526669 LBX1P52954 281 aa15.73■□□□□ 0.11
CD44-224ENST00000526669 UBXN2AP68543 259 aa15.73■□□□□ 0.11
CD44-224ENST00000526669 NOM1Q5C9Z4 860 aaKnown RBP15.73■□□□□ 0.11
CD44-224ENST00000526669 MORN1Q5T089 497 aa15.73■□□□□ 0.11
CD44-224ENST00000526669 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.73■□□□□ 0.11
CD44-224ENST00000526669 BLIDQ8IZY5 108 aa15.73■□□□□ 0.11
CD44-224ENST00000526669 FBXO18Q8NFZ0 1043 aa15.73■□□□□ 0.11
CD44-224ENST00000526669 TAAR1Q96RJ0 339 aa15.73■□□□□ 0.11
CD44-224ENST00000526669 PCDHA4Q9UN74 947 aa15.73■□□□□ 0.11
CD44-224ENST00000526669 DDX49Q9Y6V7 483 aaKnown RBP15.73■□□□□ 0.11
CD44-224ENST00000526669 SYT1P21579 422 aa15.72■□□□□ 0.11
CD44-224ENST00000526669 GNA11P29992 359 aa15.72■□□□□ 0.11
CD44-224ENST00000526669 CTCFP49711 727 aaPredicted RBP15.72■□□□□ 0.11
CD44-224ENST00000526669 PRKCZQ05513 592 aa15.72■□□□□ 0.11
CD44-224ENST00000526669 MAP2K5Q13163 448 aa15.72■□□□□ 0.11
CD44-224ENST00000526669 NR5A1Q13285 461 aa15.72■□□□□ 0.11
CD44-224ENST00000526669 FOXD4L5Q5VV16 416 aaPredicted RBP15.72■□□□□ 0.11
CD44-224ENST00000526669 MCTP1Q6DN14 999 aa15.72■□□□□ 0.11
CD44-224ENST00000526669 DPP9Q86TI2 863 aa15.72■□□□□ 0.11
CD44-224ENST00000526669 DIS3L2Q8IYB7 885 aaKnown RBP15.72■□□□□ 0.11
CD44-224ENST00000526669 REXO1Q8N1G1 1221 aaKnown RBP15.72■□□□□ 0.11
CD44-224ENST00000526669 NPLOC4Q8TAT6 608 aa15.72■□□□□ 0.11
CD44-224ENST00000526669 FOXD4L4Q8WXT5 416 aaPredicted RBP15.72■□□□□ 0.11
CD44-224ENST00000526669 NUDT12Q9BQG2 462 aa15.72■□□□□ 0.11
CD44-224ENST00000526669 FRMPD3Q5JV73 1810 aa15.71■□□□□ 0.11
CD44-224ENST00000526669 SOWAHBA6NEL2 793 aa15.71■□□□□ 0.11
CD44-224ENST00000526669 FAM205CA6NFA0 338 aa15.71■□□□□ 0.11
CD44-224ENST00000526669 BTBD18B2RXH4 712 aa15.71■□□□□ 0.11
CD44-224ENST00000526669 KIF28PB7ZC32 967 aa15.71■□□□□ 0.11
CD44-224ENST00000526669 STRNO43815 780 aa15.71■□□□□ 0.11
CD44-224ENST00000526669 EIF2AK2P19525 551 aaKnown RBP15.71■□□□□ 0.11
CD44-224ENST00000526669 CLK2P49760 499 aaKnown RBP15.71■□□□□ 0.11
CD44-224ENST00000526669 SAFBQ15424 915 aaKnown RBP eCLIP15.71■□□□□ 0.11
CD44-224ENST00000526669 ABRAQ8N0Z2 381 aa15.71■□□□□ 0.11
CD44-224ENST00000526669 FAM133AQ8N9E0 248 aa15.71■□□□□ 0.11
CD44-224ENST00000526669 DAGLBQ8NCG7 672 aa15.71■□□□□ 0.11
CD44-224ENST00000526669 RGS22Q8NE09 1264 aa15.71■□□□□ 0.11
CD44-224ENST00000526669 BICD2Q8TD16 824 aa15.71■□□□□ 0.11
CD44-224ENST00000526669 FGD4Q96M96 766 aa15.71■□□□□ 0.11
CD44-224ENST00000526669 ANO3Q9BYT9 981 aa15.71■□□□□ 0.11
CD44-224ENST00000526669 BRMS1Q9HCU9 246 aa15.71■□□□□ 0.11
CD44-224ENST00000526669 GJD2Q9UKL4 321 aa15.71■□□□□ 0.11
CD44-224ENST00000526669 PCDHA6Q9UN73 950 aa15.71■□□□□ 0.11
CD44-224ENST00000526669 TRIM17Q9Y577 477 aa15.71■□□□□ 0.11
CD44-224ENST00000526669 PCDHA8Q9Y5H6 950 aa15.71■□□□□ 0.11
CD44-224ENST00000526669 ASTN1O14525 1302 aa15.7■□□□□ 0.1
CD44-224ENST00000526669 DNAJC25-GNG10A0A024R161 153 aa15.7■□□□□ 0.1
CD44-224ENST00000526669 SPDYE3A6NKU9 549 aa15.7■□□□□ 0.1
CD44-224ENST00000526669 PIK3CDO00329 1044 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms