RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 POU3F3P20264 500 aaPredicted RBP6.59□□□□□ -1.35
USP47-206ENST00000525367 CEBPAP49715 358 aaPredicted RBP6.59□□□□□ -1.35
USP47-206ENST00000525367 SEPHS1P49903 392 aa6.59□□□□□ -1.35
USP47-206ENST00000525367 PCBP3P57721 371 aaKnown RBP6.59□□□□□ -1.35
USP47-206ENST00000525367 TEKQ02763 1124 aa6.59□□□□□ -1.35
USP47-206ENST00000525367 EGR3Q06889 387 aa6.59□□□□□ -1.35
USP47-206ENST00000525367 BNIP3Q12983 259 aa6.59□□□□□ -1.35
USP47-206ENST00000525367 INF2Q27J81 1249 aa6.59□□□□□ -1.35
USP47-206ENST00000525367 THAP5Q7Z6K1 395 aa6.59□□□□□ -1.35
USP47-206ENST00000525367 CPNE8Q86YQ8 564 aa6.59□□□□□ -1.35
USP47-206ENST00000525367 LINC00116Q8NCU8 138 aa6.59□□□□□ -1.35
USP47-206ENST00000525367 PHF20Q9BVI0 1012 aa6.59□□□□□ -1.35
USP47-206ENST00000525367 DDX56Q9NY93 547 aaKnown RBP6.59□□□□□ -1.35
USP47-206ENST00000525367 MAGEC2Q9UBF1 373 aaPredicted RBP6.59□□□□□ -1.35
USP47-206ENST00000525367 FBXL7Q9UJT9 491 aa6.59□□□□□ -1.35
USP47-206ENST00000525367 PCDHA9Q9Y5H5 950 aa6.59□□□□□ -1.35
USP47-206ENST00000525367 TNPO3Q9Y5L0 923 aaKnown RBP6.59□□□□□ -1.35
USP47-206ENST00000525367 GSG1L2A8MUP6 293 aa6.58□□□□□ -1.36
USP47-206ENST00000525367 FGF10O15520 208 aaPredicted RBP6.58□□□□□ -1.36
USP47-206ENST00000525367 MEFVO15553 781 aaPredicted RBP6.58□□□□□ -1.36
USP47-206ENST00000525367 TPD52L2O43399 206 aaKnown RBP6.58□□□□□ -1.36
USP47-206ENST00000525367 CRTAMO95727 393 aa6.58□□□□□ -1.36
USP47-206ENST00000525367 GABREP78334 506 aa6.58□□□□□ -1.36
USP47-206ENST00000525367 AOC3Q16853 763 aa6.58□□□□□ -1.36
USP47-206ENST00000525367 MSMPQ1L6U9 139 aa6.58□□□□□ -1.36
USP47-206ENST00000525367 RCSD1Q6JBY9 416 aa6.58□□□□□ -1.36
USP47-206ENST00000525367 WFDC3Q8IUB2 231 aa6.58□□□□□ -1.36
USP47-206ENST00000525367 RPUSD2Q8IZ73 545 aaKnown RBP6.58□□□□□ -1.36
USP47-206ENST00000525367 PRPF38AQ8NAV1 312 aaKnown RBP6.58□□□□□ -1.36
USP47-206ENST00000525367 PTPRN2Q92932 1015 aa6.58□□□□□ -1.36
USP47-206ENST00000525367 CCDC140Q96MF4 163 aa6.58□□□□□ -1.36
USP47-206ENST00000525367 FMNL2Q96PY5 1086 aa6.58□□□□□ -1.36
USP47-206ENST00000525367 TYW1Q9NV66 732 aaKnown RBP6.58□□□□□ -1.36
USP47-206ENST00000525367 TMEM265A0A087WTH1 108 aa6.57□□□□□ -1.36
USP47-206ENST00000525367 LOC102724159A0A0B4J2E5 919 aa6.57□□□□□ -1.36
USP47-206ENST00000525367 SSU72P8A0A1W2PR75 194 aa6.57□□□□□ -1.36
USP47-206ENST00000525367 KCNQ2O43526 872 aa6.57□□□□□ -1.36
USP47-206ENST00000525367 VIL1P09327 827 aaKnown RBP6.57□□□□□ -1.36
USP47-206ENST00000525367 RPL10P27635 214 aaKnown RBP6.57□□□□□ -1.36
USP47-206ENST00000525367 NOP2P46087 812 aaKnown RBP6.57□□□□□ -1.36
USP47-206ENST00000525367 PWP2Q15269 919 aaKnown RBP6.57□□□□□ -1.36
USP47-206ENST00000525367 CPSF6Q16630 551 aaKnown RBP eCLIP6.57□□□□□ -1.36
USP47-206ENST00000525367 STYK1Q6J9G0 422 aa6.57□□□□□ -1.36
USP47-206ENST00000525367 ZNF574Q6ZN55 896 aaPredicted RBP6.57□□□□□ -1.36
USP47-206ENST00000525367 WAPLQ7Z5K2 1190 aa6.57□□□□□ -1.36
USP47-206ENST00000525367 RNF180Q86T96 592 aa6.57□□□□□ -1.36
USP47-206ENST00000525367 LRRTM3Q86VH5 581 aa6.57□□□□□ -1.36
USP47-206ENST00000525367 JAMLQ86YT9 394 aa6.57□□□□□ -1.36
USP47-206ENST00000525367 KSR1Q8IVT5 923 aa6.57□□□□□ -1.36
USP47-206ENST00000525367 TMEM52Q8NDY8 209 aa6.57□□□□□ -1.36
USP47-206ENST00000525367 HRASLS5Q96KN8 279 aa6.57□□□□□ -1.36
USP47-206ENST00000525367 PTCHD1Q96NR3 888 aa6.57□□□□□ -1.36
USP47-206ENST00000525367 ERVK13-1Q9NX77 482 aa6.57□□□□□ -1.36
USP47-206ENST00000525367 PPARGC1AQ9UBK2 798 aaKnown RBP6.57□□□□□ -1.36
USP47-206ENST00000525367 EBF1Q9UH73 591 aa6.57□□□□□ -1.36
USP47-206ENST00000525367 FAN1Q9Y2M0 1017 aa6.57□□□□□ -1.36
USP47-206ENST00000525367 PCDHA8Q9Y5H6 950 aa6.57□□□□□ -1.36
USP47-206ENST00000525367 MED26O95402 600 aa6.56□□□□□ -1.36
USP47-206ENST00000525367 CNGA1P29973 690 aa6.56□□□□□ -1.36
USP47-206ENST00000525367 STAT3P40763 770 aa6.56□□□□□ -1.36
USP47-206ENST00000525367 EVA1CP58658 441 aa6.56□□□□□ -1.36
USP47-206ENST00000525367 LAPTM5Q13571 262 aa6.56□□□□□ -1.36
USP47-206ENST00000525367 PCBP1Q15365 356 aaKnown RBP eCLIP6.56□□□□□ -1.36
USP47-206ENST00000525367 ACBD5Q5T8D3 534 aaPredicted RBP6.56□□□□□ -1.36
USP47-206ENST00000525367 ABHD17CQ6PCB6 329 aa6.56□□□□□ -1.36
USP47-206ENST00000525367 RNF111Q6ZNA4 994 aa6.56□□□□□ -1.36
USP47-206ENST00000525367 FAM9AQ8IZU1 332 aaPredicted RBP6.56□□□□□ -1.36
USP47-206ENST00000525367 RCBTB1Q8NDN9 531 aa6.56□□□□□ -1.36
USP47-206ENST00000525367 DCAF4Q8WV16 495 aa6.56□□□□□ -1.36
USP47-206ENST00000525367 CEP89Q96ST8 783 aa6.56□□□□□ -1.36
USP47-206ENST00000525367 CARS2Q9HA77 564 aaKnown RBP6.56□□□□□ -1.36
USP47-206ENST00000525367 RNF112Q9ULX5 631 aa6.56□□□□□ -1.36
USP47-206ENST00000525367 SNX11Q9Y5W9 270 aa6.56□□□□□ -1.36
USP47-206ENST00000525367 NPFFR2Q9Y5X5 522 aa6.56□□□□□ -1.36
USP47-206ENST00000525367 NPHP3-ACAD11A0A0J9YXS1 232 aa6.55□□□□□ -1.36
USP47-206ENST00000525367 TCRBV16S1A1N1A0A5B0 115 aa6.55□□□□□ -1.36
USP47-206ENST00000525367 OPA1O60313 960 aa6.55□□□□□ -1.36
USP47-206ENST00000525367 PAMP19021 973 aa6.55□□□□□ -1.36
USP47-206ENST00000525367 TXKP42681 527 aa6.55□□□□□ -1.36
USP47-206ENST00000525367 IKZF1Q13422 519 aa6.55□□□□□ -1.36
USP47-206ENST00000525367 SEPT7Q16181 437 aaKnown RBP6.55□□□□□ -1.36
USP47-206ENST00000525367 EEF1DP3Q658K8 133 aa6.55□□□□□ -1.36
USP47-206ENST00000525367 TMPRSS7Q7RTY8 843 aa6.55□□□□□ -1.36
USP47-206ENST00000525367 MAMDC2Q7Z304 686 aaPredicted RBP6.55□□□□□ -1.36
USP47-206ENST00000525367 KRT26Q7Z3Y9 468 aa6.55□□□□□ -1.36
USP47-206ENST00000525367 STRA8Q7Z7C7 330 aa6.55□□□□□ -1.36
USP47-206ENST00000525367 CCAR1Q8IX12 1150 aaKnown RBP6.55□□□□□ -1.36
USP47-206ENST00000525367 NAT16Q8N8M0 369 aa6.55□□□□□ -1.36
USP47-206ENST00000525367 DIO2Q92813 273 aa6.55□□□□□ -1.36
USP47-206ENST00000525367 PCGF6Q9BYE7 350 aa6.55□□□□□ -1.36
USP47-206ENST00000525367 SLC52A1Q9NWF4 448 aa6.55□□□□□ -1.36
USP47-206ENST00000525367 G3BP2Q9UN86 482 aaKnown RBP6.55□□□□□ -1.36
USP47-206ENST00000525367 CCDC194A0A1B0GVG4 234 aa6.54□□□□□ -1.36
USP47-206ENST00000525367 PAX4O43316 350 aa6.54□□□□□ -1.36
USP47-206ENST00000525367 KPNA6O60684 536 aa6.54□□□□□ -1.36
USP47-206ENST00000525367 EFCAB14O75071 495 aa6.54□□□□□ -1.36
USP47-206ENST00000525367 YBX3P16989 372 aaKnown RBP eCLIP6.54□□□□□ -1.36
USP47-206ENST00000525367 LTBRP36941 435 aa6.54□□□□□ -1.36
USP47-206ENST00000525367 CDKN1CP49918 316 aaPredicted RBP6.54□□□□□ -1.36
USP47-206ENST00000525367 GUCY1A3Q02108 690 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms