RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 TSPY2A6NKD2 308 aa14.66□□□□□ -0.06
CAPN1-202ENST00000524773 AKR1B10O60218 316 aa14.66□□□□□ -0.06
CAPN1-202ENST00000524773 GLI1P08151 1106 aa14.66□□□□□ -0.06
CAPN1-202ENST00000524773 GUCY2CP25092 1073 aa14.66□□□□□ -0.06
CAPN1-202ENST00000524773 DNM2P50570 870 aa14.66□□□□□ -0.06
CAPN1-202ENST00000524773 LRRC41Q15345 812 aa14.66□□□□□ -0.06
CAPN1-202ENST00000524773 GOLPH3Q9H4A6 298 aa14.66□□□□□ -0.06
CAPN1-202ENST00000524773 NLRC4Q9NPP4 1024 aa14.66□□□□□ -0.06
CAPN1-202ENST00000524773 TFCP2L1Q9NZI6 479 aa14.66□□□□□ -0.06
CAPN1-202ENST00000524773 CAPN7Q9Y6W3 813 aa14.66□□□□□ -0.06
CAPN1-202ENST00000524773 SHANK3Q9BYB0 1731 aa14.65□□□□□ -0.06
CAPN1-202ENST00000524773 NDUFAB1O14561 156 aa14.65□□□□□ -0.06
CAPN1-202ENST00000524773 EIF3HO15372 352 aaKnown RBP eCLIP14.65□□□□□ -0.06
CAPN1-202ENST00000524773 FTCDO95954 541 aa14.65□□□□□ -0.06
CAPN1-202ENST00000524773 VAV2P52735 878 aa14.65□□□□□ -0.06
CAPN1-202ENST00000524773 MEA1Q16626 185 aa14.65□□□□□ -0.06
CAPN1-202ENST00000524773 TXNRD1Q16881 649 aa14.65□□□□□ -0.06
CAPN1-202ENST00000524773 HAUS3Q68CZ6 603 aa14.65□□□□□ -0.06
CAPN1-202ENST00000524773 MTMR8Q96EF0 704 aa14.65□□□□□ -0.06
CAPN1-202ENST00000524773 CCDC194A0A1B0GVG4 234 aa14.65□□□□□ -0.06
CAPN1-202ENST00000524773 TARSL2A2RTX5 802 aaKnown RBP14.65□□□□□ -0.06
CAPN1-202ENST00000524773 USP17L3A6NCW0 530 aa14.65□□□□□ -0.06
CAPN1-202ENST00000524773 USP17L4A6NCW7 530 aa14.65□□□□□ -0.06
CAPN1-202ENST00000524773 USP17L8P0C7I0 530 aa14.65□□□□□ -0.06
CAPN1-202ENST00000524773 HNRNPH1P31943 449 aaKnown RBP14.65□□□□□ -0.06
CAPN1-202ENST00000524773 TECP42680 631 aa14.65□□□□□ -0.06
CAPN1-202ENST00000524773 KIF11P52732 1056 aa14.65□□□□□ -0.06
CAPN1-202ENST00000524773 TUBB4BP68371 445 aa14.65□□□□□ -0.06
CAPN1-202ENST00000524773 SLC35G1Q2M3R5 365 aa14.65□□□□□ -0.06
CAPN1-202ENST00000524773 LETM2Q2VYF4 491 aa14.65□□□□□ -0.06
CAPN1-202ENST00000524773 USP17L1Q7RTZ2 530 aa14.65□□□□□ -0.06
CAPN1-202ENST00000524773 CCDC43Q96MW1 224 aaKnown RBP14.65□□□□□ -0.06
CAPN1-202ENST00000524773 COL22A1Q8NFW1 1626 aaPredicted RBP14.65□□□□□ -0.06
CAPN1-202ENST00000524773 SHOX2O60902 331 aaPredicted RBP14.64□□□□□ -0.07
CAPN1-202ENST00000524773 SLIT2O94813 1529 aa14.64□□□□□ -0.07
CAPN1-202ENST00000524773 BMP15O95972 392 aa14.64□□□□□ -0.07
CAPN1-202ENST00000524773 TUBBP07437 444 aa14.64□□□□□ -0.07
CAPN1-202ENST00000524773 IGHMBP2P38935 993 aaKnown RBP14.64□□□□□ -0.07
CAPN1-202ENST00000524773 ZBED6P86452 979 aa14.64□□□□□ -0.07
CAPN1-202ENST00000524773 PPFIA1Q13136 1202 aa14.64□□□□□ -0.07
CAPN1-202ENST00000524773 PFKFB3Q16875 520 aaPredicted RBP14.64□□□□□ -0.07
CAPN1-202ENST00000524773 UBR2Q8IWV8 1755 aa14.64□□□□□ -0.07
CAPN1-202ENST00000524773 GJA10Q969M2 543 aa14.64□□□□□ -0.07
CAPN1-202ENST00000524773 RUFY1Q96T51 708 aa14.64□□□□□ -0.07
CAPN1-202ENST00000524773 VAT1LQ9HCJ6 419 aa14.64□□□□□ -0.07
CAPN1-202ENST00000524773 COL4A1P02462 1669 aa14.64□□□□□ -0.07
CAPN1-202ENST00000524773 LRRC53A6NM62 1247 aa14.64□□□□□ -0.07
CAPN1-202ENST00000524773 EEF1GP26641 437 aaKnown RBP14.64□□□□□ -0.07
CAPN1-202ENST00000524773 SLC1A4P43007 532 aa14.64□□□□□ -0.07
CAPN1-202ENST00000524773 GUCY2DQ02846 1103 aa14.64□□□□□ -0.07
CAPN1-202ENST00000524773 SLC44A5Q8NCS7 719 aa14.64□□□□□ -0.07
CAPN1-202ENST00000524773 GIMAP8Q8ND71 665 aaPredicted RBP14.64□□□□□ -0.07
CAPN1-202ENST00000524773 P2RX5Q93086 422 aa14.64□□□□□ -0.07
CAPN1-202ENST00000524773 RNPC3Q96LT9 517 aaKnown RBP14.64□□□□□ -0.07
CAPN1-202ENST00000524773 SEMA6BQ9H3T3 888 aa14.64□□□□□ -0.07
CAPN1-202ENST00000524773 A0A1W2PQC6 194 aa14.64□□□□□ -0.07
CAPN1-202ENST00000524773 INPP5BP32019 993 aa14.64□□□□□ -0.07
CAPN1-202ENST00000524773 HPDP32754 393 aaPredicted RBP14.64□□□□□ -0.07
CAPN1-202ENST00000524773 NNTQ13423 1086 aa14.64□□□□□ -0.07
CAPN1-202ENST00000524773 BICDL1Q6ZP65 573 aa14.64□□□□□ -0.07
CAPN1-202ENST00000524773 THAP9Q9H5L6 903 aa14.64□□□□□ -0.07
CAPN1-202ENST00000524773 RBM28Q9NW13 759 aaKnown RBP14.64□□□□□ -0.07
CAPN1-202ENST00000524773 PHLPP1O60346 1717 aa14.63□□□□□ -0.07
CAPN1-202ENST00000524773 MCM3P25205 808 aa14.63□□□□□ -0.07
CAPN1-202ENST00000524773 LONP1P36776 959 aaKnown RBP14.63□□□□□ -0.07
CAPN1-202ENST00000524773 KCNQ4P56696 695 aa14.63□□□□□ -0.07
CAPN1-202ENST00000524773 MMS22LQ6ZRQ5 1243 aa14.63□□□□□ -0.07
CAPN1-202ENST00000524773 OR2W6PQ8NHA6 318 aa14.63□□□□□ -0.07
CAPN1-202ENST00000524773 SH2D4AQ9H788 454 aa14.63□□□□□ -0.07
CAPN1-202ENST00000524773 EPB41L5Q9HCM4 733 aa14.63□□□□□ -0.07
CAPN1-202ENST00000524773 COL1A1P02452 1464 aaPredicted RBP14.63□□□□□ -0.07
CAPN1-202ENST00000524773 TNS2Q63HR2 1409 aa14.63□□□□□ -0.07
CAPN1-202ENST00000524773 SHTN1A0MZ66 631 aa14.63□□□□□ -0.07
CAPN1-202ENST00000524773 TACC1O75410 805 aa14.63□□□□□ -0.07
CAPN1-202ENST00000524773 PRDX5P30044 214 aa14.63□□□□□ -0.07
CAPN1-202ENST00000524773 RNF187Q5TA31 235 aaPredicted RBP14.63□□□□□ -0.07
CAPN1-202ENST00000524773 C8orf74Q6P047 294 aa14.63□□□□□ -0.07
CAPN1-202ENST00000524773 KIAA0895Q8NCT3 520 aa14.63□□□□□ -0.07
CAPN1-202ENST00000524773 TANGO6Q9C0B7 1094 aa14.63□□□□□ -0.07
CAPN1-202ENST00000524773 PCDHA6Q9UN73 950 aa14.63□□□□□ -0.07
CAPN1-202ENST00000524773 PCDHA8Q9Y5H6 950 aa14.63□□□□□ -0.07
CAPN1-202ENST00000524773 COL16A1Q07092 1604 aaPredicted RBP14.62□□□□□ -0.07
CAPN1-202ENST00000524773 CCNT1O60563 726 aaKnown RBP14.62□□□□□ -0.07
CAPN1-202ENST00000524773 TDRD12Q587J7 1177 aaKnown RBP14.62□□□□□ -0.07
CAPN1-202ENST00000524773 RCSD1Q6JBY9 416 aa14.62□□□□□ -0.07
CAPN1-202ENST00000524773 STIM2Q9P246 746 aa14.62□□□□□ -0.07
CAPN1-202ENST00000524773 ZNF233A6NK53 670 aa14.62□□□□□ -0.07
CAPN1-202ENST00000524773 H0YHG0 523 aa14.62□□□□□ -0.07
CAPN1-202ENST00000524773 MAGEA1P43355 309 aa14.62□□□□□ -0.07
CAPN1-202ENST00000524773 TFAP4Q01664 338 aa14.62□□□□□ -0.07
CAPN1-202ENST00000524773 CABP7Q86V35 215 aa14.62□□□□□ -0.07
CAPN1-202ENST00000524773 ZNF34Q8IZ26 560 aa14.62□□□□□ -0.07
CAPN1-202ENST00000524773 EHBP1Q8NDI1 1231 aa14.62□□□□□ -0.07
CAPN1-202ENST00000524773 TBC1D7Q9P0N9 293 aa14.62□□□□□ -0.07
CAPN1-202ENST00000524773 NIP7Q9Y221 180 aaKnown RBP eCLIP14.62□□□□□ -0.07
CAPN1-202ENST00000524773 CYTH3O43739 400 aa14.61□□□□□ -0.07
CAPN1-202ENST00000524773 HSF2BPO75031 334 aa14.61□□□□□ -0.07
CAPN1-202ENST00000524773 RHOBTB3O94955 611 aa14.61□□□□□ -0.07
CAPN1-202ENST00000524773 CCDC70Q6NSX1 233 aa14.61□□□□□ -0.07
CAPN1-202ENST00000524773 CHADLQ6NUI6 762 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms