RNA–Protein interactions for RNA: ENST00000523334.1

HDAC2-215, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 4,810 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-215ENST00000523334 KIAA1328Q86T90 577 aa4.35□□□□□ -1.71
HDAC2-215ENST00000523334 FAM160B2Q86V87 743 aa4.35□□□□□ -1.71
HDAC2-215ENST00000523334 KCNJ18B7U540 433 aa4.35□□□□□ -1.71
HDAC2-215ENST00000523334 TRAF5O00463 557 aa4.35□□□□□ -1.71
HDAC2-215ENST00000523334 TDP2O95551 362 aa4.35□□□□□ -1.71
HDAC2-215ENST00000523334 TRIM14Q14142 442 aa4.35□□□□□ -1.71
HDAC2-215ENST00000523334 KCNJ12Q14500 433 aa4.35□□□□□ -1.71
HDAC2-215ENST00000523334 POTEAQ6S8J7 498 aa4.35□□□□□ -1.71
HDAC2-215ENST00000523334 AGBL3Q8NEM8 1001 aa4.35□□□□□ -1.71
HDAC2-215ENST00000523334 DNAI1Q9UI46 699 aa4.35□□□□□ -1.71
HDAC2-215ENST00000523334 BAZ2AQ9UIF9 1905 aaKnown RBP4.35□□□□□ -1.71
HDAC2-215ENST00000523334 LRP5O75197 1615 aa4.35□□□□□ -1.71
HDAC2-215ENST00000523334 AP5Z1O43299 807 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 ZBED4O75132 1171 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 KRT9P35527 623 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 GABPAQ06546 454 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 TTLL12Q14166 644 aaPredicted RBP4.34□□□□□ -1.71
HDAC2-215ENST00000523334 SPA17Q15506 151 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 CCDC144BQ3MJ40 725 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 TCERG1LQ5VWI1 586 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 TYW1BQ6NUM6 668 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 RASGRP2Q7LDG7 609 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 VSTM4Q8IW00 320 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 TXLNBQ8N3L3 684 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 DHTKD1Q96HY7 919 aaPredicted RBP4.34□□□□□ -1.71
HDAC2-215ENST00000523334 NOC4LQ9BVI4 516 aaKnown RBP4.34□□□□□ -1.71
HDAC2-215ENST00000523334 ARGLU1Q9NWB6 273 aaPredicted RBP4.34□□□□□ -1.71
HDAC2-215ENST00000523334 RWDD2AQ9UIY3 292 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 KIAA1024Q9UPX6 916 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 GDAQ9Y2T3 454 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 SPDYE2BA6NHP3 402 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 CHMP2AO43633 222 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 GAS7O60861 476 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 FAM13AO94988 1023 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 SPDYE6P0CI01 402 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 ALAS1P13196 640 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 ADKP55263 362 aaKnown RBP4.34□□□□□ -1.71
HDAC2-215ENST00000523334 SNAP25P60880 206 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 ARHGAP4P98171 946 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 MCM6Q14566 821 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 ARID5BQ14865 1188 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 KIF4BQ2VIQ3 1234 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 KMT5BQ4FZB7 885 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 FAM26FQ5R3K3 315 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 FAM83BQ5T0W9 1011 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 NSMFQ6X4W1 530 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 TRMT1LQ7Z2T5 733 aaKnown RBP4.34□□□□□ -1.71
HDAC2-215ENST00000523334 GPBP1Q86WP2 473 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 ZFPM1Q8IX07 1006 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 UBXN4Q92575 508 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 MMRN2Q9H8L6 949 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 SLC39A2Q9NP94 309 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 PNMA2Q9UL42 364 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 CCPG1Q9ULG6 757 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 TAF1P21675 1872 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 POTEMA6NI47 508 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 NPM3O75607 178 aaKnown RBP4.34□□□□□ -1.71
HDAC2-215ENST00000523334 FLOT1O75955 427 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 CASQ1P31415 396 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 CYLC1P35663 651 aaPredicted RBP4.34□□□□□ -1.71
HDAC2-215ENST00000523334 USP11P51784 963 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 COPB1P53618 953 aaKnown RBP4.34□□□□□ -1.71
HDAC2-215ENST00000523334 RAD51AP2Q09MP3 1159 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 DPYDQ12882 1025 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 SEMA3FQ13275 785 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 ARHGAP27Q6ZUM4 889 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 MYOCDQ8IZQ8 938 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 PSMD1Q99460 953 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 ZNF341Q9BYN7 854 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 AS3MTQ9HBK9 375 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 HOMER2Q9NSB8 354 aa4.34□□□□□ -1.71
HDAC2-215ENST00000523334 NHSQ6T4R5 1651 aa4.34□□□□□ -1.72
HDAC2-215ENST00000523334 CETN3O15182 167 aa4.34□□□□□ -1.72
HDAC2-215ENST00000523334 AKR1B10O60218 316 aa4.34□□□□□ -1.72
HDAC2-215ENST00000523334 COBLO75128 1261 aa4.34□□□□□ -1.72
HDAC2-215ENST00000523334 CCNE1P24864 410 aa4.34□□□□□ -1.72
HDAC2-215ENST00000523334 EEF1GP26641 437 aaKnown RBP4.34□□□□□ -1.72
HDAC2-215ENST00000523334 HOXA13P31271 388 aaPredicted RBP4.34□□□□□ -1.72
HDAC2-215ENST00000523334 DNM2P50570 870 aa4.34□□□□□ -1.72
HDAC2-215ENST00000523334 PDIA5Q14554 519 aa4.34□□□□□ -1.72
HDAC2-215ENST00000523334 RASA3Q14644 834 aa4.34□□□□□ -1.72
HDAC2-215ENST00000523334 TDRD12Q587J7 1177 aaKnown RBP4.34□□□□□ -1.72
HDAC2-215ENST00000523334 CCDC70Q6NSX1 233 aa4.34□□□□□ -1.72
HDAC2-215ENST00000523334 SYT10Q6XYQ8 523 aa4.34□□□□□ -1.72
HDAC2-215ENST00000523334 HS2ST1Q7LGA3 356 aa4.34□□□□□ -1.72
HDAC2-215ENST00000523334 SYCP3Q8IZU3 236 aa4.34□□□□□ -1.72
HDAC2-215ENST00000523334 P2RX5Q93086 422 aa4.34□□□□□ -1.72
HDAC2-215ENST00000523334 CCDC51Q96ER9 411 aa4.34□□□□□ -1.72
HDAC2-215ENST00000523334 CAMKK2Q96RR4 588 aa4.34□□□□□ -1.72
HDAC2-215ENST00000523334 TMOD4Q9NZQ9 345 aa4.34□□□□□ -1.72
HDAC2-215ENST00000523334 PKD2L1Q9P0L9 805 aa4.34□□□□□ -1.72
HDAC2-215ENST00000523334 FAM198AQ9UFP1 575 aa4.34□□□□□ -1.72
HDAC2-215ENST00000523334 ZBTB21Q9ULJ3 1066 aa4.34□□□□□ -1.72
HDAC2-215ENST00000523334 PSDA5PKW4 1024 aaPredicted RBP4.33□□□□□ -1.72
HDAC2-215ENST00000523334 RPL13P26373 211 aaKnown RBP4.33□□□□□ -1.72
HDAC2-215ENST00000523334 NF2P35240 595 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 TGFB2P61812 414 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 CYP4A11Q02928 519 aa4.33□□□□□ -1.72
HDAC2-215ENST00000523334 FMR1Q06787 632 aaKnown RBP eCLIP4.33□□□□□ -1.721e-8■■■■■ 30.9
HDAC2-215ENST00000523334 CXCL9Q07325 125 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms