RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 FPGSQ05932 587 aa21.6■■□□□ 1.05
TOP1MT-216ENST00000522121 USH1GQ495M9 461 aa21.6■■□□□ 1.05
TOP1MT-216ENST00000522121 ASPRV1Q53RT3 343 aa21.6■■□□□ 1.05
TOP1MT-216ENST00000522121 FAM109BQ6ICB4 259 aaPredicted RBP21.6■■□□□ 1.05
TOP1MT-216ENST00000522121 SLC30A10Q6XR72 485 aa21.6■■□□□ 1.05
TOP1MT-216ENST00000522121 MTMR10Q9NXD2 777 aa21.6■■□□□ 1.05
TOP1MT-216ENST00000522121 B4DLN1 442 aa21.59■■□□□ 1.05
TOP1MT-216ENST00000522121 MRPL12P52815 198 aaKnown RBP21.59■■□□□ 1.05
TOP1MT-216ENST00000522121 RPS6P62753 249 aaKnown RBP21.59■■□□□ 1.05
TOP1MT-216ENST00000522121 PDE4DQ08499 809 aa21.59■■□□□ 1.05
TOP1MT-216ENST00000522121 LAMA4Q16363 1823 aa21.59■■□□□ 1.05
TOP1MT-216ENST00000522121 DHX16O60231 1041 aaKnown RBP21.58■■□□□ 1.05
TOP1MT-216ENST00000522121 TIMP1P01033 207 aa21.58■■□□□ 1.05
TOP1MT-216ENST00000522121 PARP1P09874 1014 aaKnown RBP21.58■■□□□ 1.05
TOP1MT-216ENST00000522121 TRDNQ13061 729 aa21.58■■□□□ 1.05
TOP1MT-216ENST00000522121 CDC37Q16543 378 aaPredicted RBP21.58■■□□□ 1.05
TOP1MT-216ENST00000522121 DUSP28Q4G0W2 176 aa21.58■■□□□ 1.05
TOP1MT-216ENST00000522121 IFIT1BQ5T764 474 aaKnown RBP21.58■■□□□ 1.05
TOP1MT-216ENST00000522121 CXCL17Q6UXB2 119 aa21.58■■□□□ 1.05
TOP1MT-216ENST00000522121 RGS22Q8NE09 1264 aa21.58■■□□□ 1.05
TOP1MT-216ENST00000522121 DNERQ8NFT8 737 aa21.58■■□□□ 1.05
TOP1MT-216ENST00000522121 SEZ6LQ9BYH1 1024 aa21.58■■□□□ 1.05
TOP1MT-216ENST00000522121 IL25Q9H293 177 aa21.58■■□□□ 1.05
TOP1MT-216ENST00000522121 CPVLQ9H3G5 476 aa21.58■■□□□ 1.05
TOP1MT-216ENST00000522121 TBX21Q9UL17 535 aa21.58■■□□□ 1.05
TOP1MT-216ENST00000522121 ADGRF4Q8IZF3 695 aa21.57■■□□□ 1.04
TOP1MT-216ENST00000522121 RNPC3Q96LT9 517 aaKnown RBP21.57■■□□□ 1.04
TOP1MT-216ENST00000522121 WDR11Q9BZH6 1224 aa21.57■■□□□ 1.04
TOP1MT-216ENST00000522121 MAF1Q9H063 256 aa21.57■■□□□ 1.04
TOP1MT-216ENST00000522121 U3KPZ7 1027 aaPredicted RBP21.57■■□□□ 1.04
TOP1MT-216ENST00000522121 ABCB11O95342 1321 aa21.56■■□□□ 1.04
TOP1MT-216ENST00000522121 CHMLP26374 656 aa21.56■■□□□ 1.04
TOP1MT-216ENST00000522121 ZNF697Q5TEC3 545 aa21.56■■□□□ 1.04
TOP1MT-216ENST00000522121 FAM126BQ8IXS8 530 aa21.56■■□□□ 1.04
TOP1MT-216ENST00000522121 STXBP5LQ9Y2K9 1186 aa21.56■■□□□ 1.04
TOP1MT-216ENST00000522121 LRRC37A2A6NM11 1700 aa21.55■■□□□ 1.04
TOP1MT-216ENST00000522121 EPHB4P54760 987 aa21.55■■□□□ 1.04
TOP1MT-216ENST00000522121 SMAD3P84022 425 aaKnown RBP21.55■■□□□ 1.04
TOP1MT-216ENST00000522121 ITGA7Q13683 1181 aa21.55■■□□□ 1.04
TOP1MT-216ENST00000522121 MFSD5Q6N075 450 aa21.55■■□□□ 1.04
TOP1MT-216ENST00000522121 MCF2L2Q86YR7 1114 aa21.55■■□□□ 1.04
TOP1MT-216ENST00000522121 SLC43A3Q8NBI5 491 aa21.55■■□□□ 1.04
TOP1MT-216ENST00000522121 RBM47A0AV96 593 aaKnown RBP21.54■■□□□ 1.04
TOP1MT-216ENST00000522121 PTGS1P23219 599 aa21.54■■□□□ 1.04
TOP1MT-216ENST00000522121 CPT1AP50416 773 aa21.54■■□□□ 1.04
TOP1MT-216ENST00000522121 PPIGQ13427 754 aaKnown RBP eCLIP21.54■■□□□ 1.044e-6■□□□□ 8.2
TOP1MT-216ENST00000522121 BRDTQ58F21 947 aaPredicted RBP21.54■■□□□ 1.04
TOP1MT-216ENST00000522121 TMEM63BQ5T3F8 832 aa21.54■■□□□ 1.04
TOP1MT-216ENST00000522121 FBXO11Q86XK2 927 aa21.54■■□□□ 1.04
TOP1MT-216ENST00000522121 TMEM199Q8N511 208 aa21.54■■□□□ 1.04
TOP1MT-216ENST00000522121 SLC17A8Q8NDX2 589 aa21.54■■□□□ 1.04
TOP1MT-216ENST00000522121 SCFD2Q8WU76 684 aa21.54■■□□□ 1.04
TOP1MT-216ENST00000522121 VAT1LQ9HCJ6 419 aa21.54■■□□□ 1.04
TOP1MT-216ENST00000522121 POLR3EQ9NVU0 708 aa21.54■■□□□ 1.04
TOP1MT-216ENST00000522121 MRPL11Q9Y3B7 192 aaKnown RBP21.54■■□□□ 1.04
TOP1MT-216ENST00000522121 ERICH2A1L162 156 aa21.53■■□□□ 1.04
TOP1MT-216ENST00000522121 NKRFO15226 690 aaKnown RBP eCLIP21.53■■□□□ 1.04
TOP1MT-216ENST00000522121 CD4P01730 458 aa21.53■■□□□ 1.04
TOP1MT-216ENST00000522121 EDNRBP24530 442 aa21.53■■□□□ 1.04
TOP1MT-216ENST00000522121 PPP2R5BQ15173 497 aa21.53■■□□□ 1.04
TOP1MT-216ENST00000522121 QRICH1Q2TAL8 776 aa21.53■■□□□ 1.04
TOP1MT-216ENST00000522121 CYB5R4Q7L1T6 521 aa21.53■■□□□ 1.04
TOP1MT-216ENST00000522121 OR6J1Q8NGC5 347 aa21.53■■□□□ 1.04
TOP1MT-216ENST00000522121 JMJD4Q9H9V9 463 aa21.53■■□□□ 1.04
TOP1MT-216ENST00000522121 GPHNQ9NQX3 736 aaPredicted RBP21.53■■□□□ 1.04
TOP1MT-216ENST00000522121 CYP21A2P08686 494 aa21.52■■□□□ 1.04
TOP1MT-216ENST00000522121 PTH1RQ03431 593 aa21.52■■□□□ 1.04
TOP1MT-216ENST00000522121 SEC23AQ15436 765 aa21.52■■□□□ 1.04
TOP1MT-216ENST00000522121 RALYLQ86SE5 291 aaKnown RBP21.52■■□□□ 1.04
TOP1MT-216ENST00000522121 FAM161BQ96MY7 647 aa21.52■■□□□ 1.04
TOP1MT-216ENST00000522121 PPP1R12CQ9BZL4 782 aa21.52■■□□□ 1.04
TOP1MT-216ENST00000522121 LCTP09848 1927 aa21.52■■□□□ 1.04
TOP1MT-216ENST00000522121 KLRF2D3W0D1 207 aa21.51■■□□□ 1.03
TOP1MT-216ENST00000522121 SART3Q15020 963 aaKnown RBP21.51■■□□□ 1.03
TOP1MT-216ENST00000522121 NSUN6Q8TEA1 469 aaKnown RBP21.51■■□□□ 1.03
TOP1MT-216ENST00000522121 IFIT3O14879 490 aaKnown RBP21.5■■□□□ 1.03
TOP1MT-216ENST00000522121 SGSM2O43147 1006 aa21.5■■□□□ 1.03
TOP1MT-216ENST00000522121 MYL3P08590 195 aa21.5■■□□□ 1.03
TOP1MT-216ENST00000522121 TXNP10599 105 aaKnown RBP21.5■■□□□ 1.03
TOP1MT-216ENST00000522121 PSMC6P62333 389 aa21.5■■□□□ 1.03
TOP1MT-216ENST00000522121 TTLL4Q14679 1199 aa21.5■■□□□ 1.03
TOP1MT-216ENST00000522121 STAG2Q8N3U4 1231 aa21.5■■□□□ 1.03
TOP1MT-216ENST00000522121 NCOA7Q8NI08 942 aa21.5■■□□□ 1.03
TOP1MT-216ENST00000522121 SYTL5Q8TDW5 730 aaPredicted RBP21.5■■□□□ 1.03
TOP1MT-216ENST00000522121 TBC1D5Q92609 795 aa21.5■■□□□ 1.03
TOP1MT-216ENST00000522121 AMNQ9BXJ7 453 aa21.5■■□□□ 1.03
TOP1MT-216ENST00000522121 HIPK3Q9H422 1215 aa21.5■■□□□ 1.03
TOP1MT-216ENST00000522121 GRIN2DO15399 1336 aa21.5■■□□□ 1.03
TOP1MT-216ENST00000522121 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.49■■□□□ 1.03
TOP1MT-216ENST00000522121 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.49■■□□□ 1.03
TOP1MT-216ENST00000522121 KPNA6O60684 536 aa21.49■■□□□ 1.03
TOP1MT-216ENST00000522121 CSF2RAP15509 400 aa21.49■■□□□ 1.03
TOP1MT-216ENST00000522121 PURAQ00577 322 aaKnown RBP21.49■■□□□ 1.03
TOP1MT-216ENST00000522121 GUCD1Q96NT3 240 aa21.49■■□□□ 1.03
TOP1MT-216ENST00000522121 TAAR1Q96RJ0 339 aa21.49■■□□□ 1.03
TOP1MT-216ENST00000522121 IWS1Q96ST2 819 aa21.49■■□□□ 1.03
TOP1MT-216ENST00000522121 RMDN3Q96TC7 470 aa21.49■■□□□ 1.03
TOP1MT-216ENST00000522121 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.49■■□□□ 1.03
TOP1MT-216ENST00000522121 MAD2L2Q9UI95 211 aa21.49■■□□□ 1.03
TOP1MT-216ENST00000522121 E7EWF7 191 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms