RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 CCDC27Q2M243 656 aa8.94□□□□□ -0.98
CTNNA1-227ENST00000521387 RABL6Q3YEC7 729 aaPredicted RBP8.94□□□□□ -0.98
CTNNA1-227ENST00000521387 EPC2Q52LR7 807 aa8.94□□□□□ -0.98
CTNNA1-227ENST00000521387 WDR63Q8IWG1 891 aa8.94□□□□□ -0.98
CTNNA1-227ENST00000521387 ANKRD44Q8N8A2 993 aa8.94□□□□□ -0.98
CTNNA1-227ENST00000521387 SH3RF3Q8TEJ3 882 aaPredicted RBP8.94□□□□□ -0.98
CTNNA1-227ENST00000521387 ATG4CQ96DT6 458 aa8.94□□□□□ -0.98
CTNNA1-227ENST00000521387 CHAMP1Q96JM3 812 aa8.94□□□□□ -0.98
CTNNA1-227ENST00000521387 FGD4Q96M96 766 aa8.94□□□□□ -0.98
CTNNA1-227ENST00000521387 ZBED2Q9BTP6 218 aa8.94□□□□□ -0.98
CTNNA1-227ENST00000521387 FTOQ9C0B1 505 aaKnown RBP eCLIP8.94□□□□□ -0.98
CTNNA1-227ENST00000521387 CD207Q9UJ71 328 aa8.94□□□□□ -0.98
CTNNA1-227ENST00000521387 DENND2AQ9ULE3 1009 aa8.94□□□□□ -0.98
CTNNA1-227ENST00000521387 A0A1W2PRG0 241 aa8.93□□□□□ -0.98
CTNNA1-227ENST00000521387 SOBPA7XYQ1 873 aa8.93□□□□□ -0.98
CTNNA1-227ENST00000521387 H3BNC9 293 aa8.93□□□□□ -0.98
CTNNA1-227ENST00000521387 CABYRO75952 493 aa8.93□□□□□ -0.98
CTNNA1-227ENST00000521387 MAP4K4O95819 1239 aaPredicted RBP8.93□□□□□ -0.98
CTNNA1-227ENST00000521387 FKBP5Q13451 457 aaPredicted RBP8.93□□□□□ -0.98
CTNNA1-227ENST00000521387 PTPN21Q16825 1174 aa8.93□□□□□ -0.98
CTNNA1-227ENST00000521387 TEX11Q8IYF3 940 aa8.93□□□□□ -0.98
CTNNA1-227ENST00000521387 MSL3Q8N5Y2 521 aaKnown RBP8.93□□□□□ -0.98
CTNNA1-227ENST00000521387 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.93□□□□□ -0.98
CTNNA1-227ENST00000521387 STK31Q9BXU1 1019 aa8.93□□□□□ -0.98
CTNNA1-227ENST00000521387 IRX2Q9BZI1 471 aaPredicted RBP8.93□□□□□ -0.98
CTNNA1-227ENST00000521387 DHX36Q9H2U1 1008 aaKnown RBP8.93□□□□□ -0.98
CTNNA1-227ENST00000521387 SPC25Q9HBM1 224 aa8.93□□□□□ -0.98
CTNNA1-227ENST00000521387 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.93□□□□□ -0.98
CTNNA1-227ENST00000521387 ABCF2Q9UG63 623 aa8.93□□□□□ -0.98
CTNNA1-227ENST00000521387 DACH1Q9UI36 760 aa8.93□□□□□ -0.98
CTNNA1-227ENST00000521387 PALD1Q9ULE6 856 aa8.93□□□□□ -0.98
CTNNA1-227ENST00000521387 GNEQ9Y223 722 aaKnown RBP8.93□□□□□ -0.98
CTNNA1-227ENST00000521387 ATG2AQ2TAZ0 1938 aa8.93□□□□□ -0.98
CTNNA1-227ENST00000521387 DNAJC25-GNG10A0A024R161 153 aa8.92□□□□□ -0.98
CTNNA1-227ENST00000521387 SEMA3EO15041 775 aa8.92□□□□□ -0.98
CTNNA1-227ENST00000521387 KCNJ6P48051 423 aa8.92□□□□□ -0.98
CTNNA1-227ENST00000521387 GNAI1P63096 354 aa8.92□□□□□ -0.98
CTNNA1-227ENST00000521387 GPM6BQ13491 265 aa8.92□□□□□ -0.98
CTNNA1-227ENST00000521387 RASGRF1Q13972 1273 aa8.92□□□□□ -0.98
CTNNA1-227ENST00000521387 TMEM63BQ5T3F8 832 aa8.92□□□□□ -0.98
CTNNA1-227ENST00000521387 KIAA0319Q5VV43 1072 aa8.92□□□□□ -0.98
CTNNA1-227ENST00000521387 FAM117BQ6P1L5 589 aa8.92□□□□□ -0.98
CTNNA1-227ENST00000521387 TATDN1Q6P1N9 297 aa8.92□□□□□ -0.98
CTNNA1-227ENST00000521387 SLF2Q8IX21 1173 aa8.92□□□□□ -0.98
CTNNA1-227ENST00000521387 MB21D1Q8N884 522 aa8.92□□□□□ -0.98
CTNNA1-227ENST00000521387 KCNG4Q8TDN1 519 aa8.92□□□□□ -0.98
CTNNA1-227ENST00000521387 SEZ6LQ9BYH1 1024 aa8.92□□□□□ -0.98
CTNNA1-227ENST00000521387 BICC1Q9H694 974 aaKnown RBP8.92□□□□□ -0.98
CTNNA1-227ENST00000521387 CLEC1BQ9P126 229 aa8.92□□□□□ -0.98
CTNNA1-227ENST00000521387 ADAMTS5Q9UNA0 930 aa8.92□□□□□ -0.98
CTNNA1-227ENST00000521387 BPTFQ12830 3046 aa8.91□□□□□ -0.98
CTNNA1-227ENST00000521387 HELZ2Q9BYK8 2649 aaKnown RBP8.91□□□□□ -0.98
CTNNA1-227ENST00000521387 DCDC2BA2VCK2 349 aa8.91□□□□□ -0.98
CTNNA1-227ENST00000521387 NCK2O43639 380 aa8.91□□□□□ -0.98
CTNNA1-227ENST00000521387 SLC25A27O95847 323 aa8.91□□□□□ -0.98
CTNNA1-227ENST00000521387 NBPF7P0C2Y1 421 aaPredicted RBP8.91□□□□□ -0.98
CTNNA1-227ENST00000521387 ADORA1P30542 326 aa8.91□□□□□ -0.98
CTNNA1-227ENST00000521387 ADAM15Q13444 863 aa8.91□□□□□ -0.98
CTNNA1-227ENST00000521387 RAB3GAP1Q15042 981 aa8.91□□□□□ -0.98
CTNNA1-227ENST00000521387 ATG9AQ7Z3C6 839 aa8.91□□□□□ -0.98
CTNNA1-227ENST00000521387 RIOX2Q8IUF8 465 aa8.91□□□□□ -0.98
CTNNA1-227ENST00000521387 MAPKAPK5Q8IW41 473 aa8.91□□□□□ -0.98
CTNNA1-227ENST00000521387 ZGPATQ8N5A5 531 aaKnown RBP8.91□□□□□ -0.98
CTNNA1-227ENST00000521387 PPP1R13LQ8WUF5 828 aa8.91□□□□□ -0.98
CTNNA1-227ENST00000521387 NSUN4Q96CB9 384 aaKnown RBP8.91□□□□□ -0.98
CTNNA1-227ENST00000521387 RPGRIP1Q96KN7 1286 aa8.91□□□□□ -0.98
CTNNA1-227ENST00000521387 SIL1Q9H173 461 aa8.91□□□□□ -0.98
CTNNA1-227ENST00000521387 CEP295Q9C0D2 2601 aa8.91□□□□□ -0.98
CTNNA1-227ENST00000521387 COL11A1P12107 1806 aaPredicted RBP8.91□□□□□ -0.98
CTNNA1-227ENST00000521387 SMG1Q96Q15 3661 aaKnown RBP8.91□□□□□ -0.98
CTNNA1-227ENST00000521387 MCM3APO60318 1980 aa8.9□□□□□ -0.98
CTNNA1-227ENST00000521387 PI15O43692 258 aa8.9□□□□□ -0.98
CTNNA1-227ENST00000521387 RFX5P48382 616 aaPredicted RBP8.9□□□□□ -0.98
CTNNA1-227ENST00000521387 HTRA4P83105 476 aaPredicted RBP8.9□□□□□ -0.98
CTNNA1-227ENST00000521387 ANGPT1Q15389 498 aa8.9□□□□□ -0.98
CTNNA1-227ENST00000521387 FSCN1Q16658 493 aaKnown RBP8.9□□□□□ -0.98
CTNNA1-227ENST00000521387 CCDC102BQ68D86 513 aa8.9□□□□□ -0.98
CTNNA1-227ENST00000521387 SMRP1Q8NCR6 262 aa8.9□□□□□ -0.98
CTNNA1-227ENST00000521387 REPS2Q8NFH8 660 aa8.9□□□□□ -0.98
CTNNA1-227ENST00000521387 PHF7Q9BWX1 381 aaPredicted RBP8.9□□□□□ -0.98
CTNNA1-227ENST00000521387 CHMP4AQ9BY43 222 aa8.9□□□□□ -0.98
CTNNA1-227ENST00000521387 TANGO6Q9C0B7 1094 aa8.9□□□□□ -0.98
CTNNA1-227ENST00000521387 SMOC2Q9H3U7 446 aa8.9□□□□□ -0.98
CTNNA1-227ENST00000521387 ABHD16BQ9H3Z7 469 aa8.9□□□□□ -0.98
CTNNA1-227ENST00000521387 INCENPQ9NQS7 918 aa8.9□□□□□ -0.98
CTNNA1-227ENST00000521387 GNL3LQ9NVN8 582 aaKnown RBP8.9□□□□□ -0.98
CTNNA1-227ENST00000521387 R4GN57 208 aa8.9□□□□□ -0.98
CTNNA1-227ENST00000521387 FLT1P17948 1338 aa8.89□□□□□ -0.99
CTNNA1-227ENST00000521387 EYA2O00167 538 aa8.89□□□□□ -0.99
CTNNA1-227ENST00000521387 SUPT20HL2P0C7V6 817 aa8.89□□□□□ -0.99
CTNNA1-227ENST00000521387 CWF19L1Q69YN2 538 aaKnown RBP8.89□□□□□ -0.99
CTNNA1-227ENST00000521387 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.89□□□□□ -0.998e-7■■■□□ 16
CTNNA1-227ENST00000521387 ERICH6Q7L0X2 663 aa8.89□□□□□ -0.99
CTNNA1-227ENST00000521387 CYP2W1Q8TAV3 490 aa8.89□□□□□ -0.99
CTNNA1-227ENST00000521387 TGFBRAP1Q8WUH2 860 aa8.89□□□□□ -0.99
CTNNA1-227ENST00000521387 MFRPQ9BY79 579 aa8.89□□□□□ -0.99
CTNNA1-227ENST00000521387 SEMA4AQ9H3S1 761 aa8.89□□□□□ -0.99
CTNNA1-227ENST00000521387 IGFLR1Q9H665 355 aa8.89□□□□□ -0.99
CTNNA1-227ENST00000521387 C9orf78Q9NZ63 289 aaPredicted RBP8.89□□□□□ -0.99
CTNNA1-227ENST00000521387 SAP30BPQ9UHR5 308 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms