RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 CNBD1Q8NA66 436 aa5.34□□□□□ -1.55
VPS13B-208ENST00000521037 TMEM40Q8WWA1 233 aa5.34□□□□□ -1.55
VPS13B-208ENST00000521037 MISP3Q96FF7 219 aa5.34□□□□□ -1.55
VPS13B-208ENST00000521037 CLEC4MQ9H2X3 399 aaPredicted RBP5.34□□□□□ -1.55
VPS13B-208ENST00000521037 PPP1R9AQ9ULJ8 1098 aa5.34□□□□□ -1.55
VPS13B-208ENST00000521037 PTPN22Q9Y2R2 807 aa5.34□□□□□ -1.55
VPS13B-208ENST00000521037 ZFHX4Q86UP3 3567 aa5.33□□□□□ -1.56
VPS13B-208ENST00000521037 CDHR2Q9BYE9 1310 aa5.33□□□□□ -1.56
VPS13B-208ENST00000521037 A0A1W2PP55 124 aa5.33□□□□□ -1.56
VPS13B-208ENST00000521037 FZD6O60353 706 aa5.33□□□□□ -1.56
VPS13B-208ENST00000521037 ASPAP45381 313 aa5.33□□□□□ -1.56
VPS13B-208ENST00000521037 EIF6P56537 245 aaKnown RBP5.33□□□□□ -1.56
VPS13B-208ENST00000521037 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
VPS13B-208ENST00000521037 ZNF530Q6P9A1 599 aaPredicted RBP5.33□□□□□ -1.56
VPS13B-208ENST00000521037 SND1Q7KZF4 910 aaKnown RBP eCLIP5.33□□□□□ -1.56
VPS13B-208ENST00000521037 PLD6Q8N2A8 252 aaKnown RBP5.33□□□□□ -1.56
VPS13B-208ENST00000521037 GTF3C2Q8WUA4 911 aaPredicted RBP5.33□□□□□ -1.56
VPS13B-208ENST00000521037 ZNF428Q96B54 188 aa5.33□□□□□ -1.56
VPS13B-208ENST00000521037 RTFDC1Q9BY42 306 aaPredicted RBP5.33□□□□□ -1.56
VPS13B-208ENST00000521037 SLC52A2Q9HAB3 445 aa5.33□□□□□ -1.56
VPS13B-208ENST00000521037 LAMB1P07942 1786 aa5.33□□□□□ -1.56
VPS13B-208ENST00000521037 COL4A1P02462 1669 aa5.33□□□□□ -1.56
VPS13B-208ENST00000521037 KIF20BQ96Q89 1820 aa5.32□□□□□ -1.56
VPS13B-208ENST00000521037 ROCK2O75116 1388 aaKnown RBP5.32□□□□□ -1.56
VPS13B-208ENST00000521037 RTL9Q8NET4 1388 aa5.32□□□□□ -1.56
VPS13B-208ENST00000521037 ST20-MTHFSA0A0A6YYL1 179 aa5.32□□□□□ -1.56
VPS13B-208ENST00000521037 FKTNO75072 461 aa5.32□□□□□ -1.56
VPS13B-208ENST00000521037 B3GALT4O96024 378 aa5.32□□□□□ -1.56
VPS13B-208ENST00000521037 MTHFSP49914 203 aa5.32□□□□□ -1.56
VPS13B-208ENST00000521037 MTMR3Q13615 1198 aa5.32□□□□□ -1.56
VPS13B-208ENST00000521037 AOC3Q16853 763 aa5.32□□□□□ -1.56
VPS13B-208ENST00000521037 GJD3Q8N144 294 aa5.32□□□□□ -1.56
VPS13B-208ENST00000521037 CCER1Q8TC90 406 aaPredicted RBP5.32□□□□□ -1.56
VPS13B-208ENST00000521037 JDP2Q8WYK2 163 aa5.32□□□□□ -1.56
VPS13B-208ENST00000521037 FAM168AQ92567 244 aa5.32□□□□□ -1.56
VPS13B-208ENST00000521037 CDCA5Q96FF9 252 aa5.32□□□□□ -1.56
VPS13B-208ENST00000521037 GUCD1Q96NT3 240 aa5.32□□□□□ -1.56
VPS13B-208ENST00000521037 WDR18Q9BV38 432 aa5.32□□□□□ -1.56
VPS13B-208ENST00000521037 CNOT7Q9UIV1 285 aaKnown RBP5.32□□□□□ -1.56
VPS13B-208ENST00000521037 HDAC9Q9UKV0 1011 aa5.32□□□□□ -1.56
VPS13B-208ENST00000521037 VAV3Q9UKW4 847 aa5.32□□□□□ -1.56
VPS13B-208ENST00000521037 ZNRF3Q9ULT6 936 aa5.32□□□□□ -1.56
VPS13B-208ENST00000521037 DNAH12Q6ZR08 3092 aa5.32□□□□□ -1.56
VPS13B-208ENST00000521037 COL3A1P02461 1466 aaPredicted RBP5.32□□□□□ -1.56
VPS13B-208ENST00000521037 KIF7Q2M1P5 1343 aa5.31□□□□□ -1.56
VPS13B-208ENST00000521037 A0A1W2PPC1 479 aa5.31□□□□□ -1.56
VPS13B-208ENST00000521037 IGSF3O75054 1194 aa5.31□□□□□ -1.56
VPS13B-208ENST00000521037 A1BGP04217 495 aa5.31□□□□□ -1.56
VPS13B-208ENST00000521037 POLR3DP05423 398 aaPredicted RBP5.31□□□□□ -1.56
VPS13B-208ENST00000521037 HSP90AB1P08238 724 aaKnown RBP5.31□□□□□ -1.56
VPS13B-208ENST00000521037 IL6STP40189 918 aaPredicted RBP5.31□□□□□ -1.56
VPS13B-208ENST00000521037 CD96P40200 585 aa5.31□□□□□ -1.56
VPS13B-208ENST00000521037 EHHADHQ08426 723 aa5.31□□□□□ -1.56
VPS13B-208ENST00000521037 KRTAP19-4Q3LI73 84 aa5.31□□□□□ -1.56
VPS13B-208ENST00000521037 ALKBH2Q6NS38 261 aa5.31□□□□□ -1.56
VPS13B-208ENST00000521037 KRT26Q7Z3Y9 468 aa5.31□□□□□ -1.56
VPS13B-208ENST00000521037 GALNT12Q8IXK2 581 aa5.31□□□□□ -1.56
VPS13B-208ENST00000521037 BHLHE22Q8NFJ8 381 aaPredicted RBP5.31□□□□□ -1.56
VPS13B-208ENST00000521037 NETO1Q8TDF5 533 aa5.31□□□□□ -1.56
VPS13B-208ENST00000521037 ZNF496Q96IT1 587 aaPredicted RBP5.31□□□□□ -1.56
VPS13B-208ENST00000521037 SETDB2Q96T68 719 aa5.31□□□□□ -1.56
VPS13B-208ENST00000521037 KCNQ5Q9NR82 932 aa5.31□□□□□ -1.56
VPS13B-208ENST00000521037 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.31□□□□□ -1.56
VPS13B-208ENST00000521037 TRIM17Q9Y577 477 aa5.31□□□□□ -1.56
VPS13B-208ENST00000521037 IVNS1ABPQ9Y6Y0 642 aa5.31□□□□□ -1.56
VPS13B-208ENST00000521037 COL2A1P02458 1487 aaPredicted RBP5.31□□□□□ -1.56
VPS13B-208ENST00000521037 POLR2AP24928 1970 aaKnown RBP5.31□□□□□ -1.56
VPS13B-208ENST00000521037 CHD9Q3L8U1 2897 aa5.3□□□□□ -1.56
VPS13B-208ENST00000521037 WDFY4Q6ZS81 3184 aa5.3□□□□□ -1.56
VPS13B-208ENST00000521037 IGF2BP3O00425 579 aaKnown RBP eCLIP5.3□□□□□ -1.56
VPS13B-208ENST00000521037 RAD17O75943 681 aa5.3□□□□□ -1.56
VPS13B-208ENST00000521037 PRKCQQ04759 706 aa5.3□□□□□ -1.56
VPS13B-208ENST00000521037 CYP27C1Q4G0S4 372 aa5.3□□□□□ -1.56
VPS13B-208ENST00000521037 B4GALNT3Q6L9W6 998 aa5.3□□□□□ -1.56
VPS13B-208ENST00000521037 DEFB123Q8N688 67 aa5.3□□□□□ -1.56
VPS13B-208ENST00000521037 C2orf69Q8N8R5 385 aa5.3□□□□□ -1.56
VPS13B-208ENST00000521037 FAM181AQ8N9Y4 354 aa5.3□□□□□ -1.56
VPS13B-208ENST00000521037 LRRN4CLQ8ND94 238 aa5.3□□□□□ -1.56
VPS13B-208ENST00000521037 TTC16Q8NEE8 873 aa5.3□□□□□ -1.56
VPS13B-208ENST00000521037 WDR89Q96FK6 387 aaPredicted RBP5.3□□□□□ -1.56
VPS13B-208ENST00000521037 GDF15Q99988 308 aa5.3□□□□□ -1.56
VPS13B-208ENST00000521037 RC3H2Q9HBD1 1191 aaKnown RBP5.3□□□□□ -1.56
VPS13B-208ENST00000521037 CRIM1Q9NZV1 1036 aa5.3□□□□□ -1.56
VPS13B-208ENST00000521037 PLAGL2Q9UPG8 496 aa5.3□□□□□ -1.56
VPS13B-208ENST00000521037 GNEQ9Y223 722 aaKnown RBP5.3□□□□□ -1.56
VPS13B-208ENST00000521037 DAGLAQ9Y4D2 1042 aa5.3□□□□□ -1.56
VPS13B-208ENST00000521037 USP34Q70CQ2 3546 aa5.3□□□□□ -1.56
VPS13B-208ENST00000521037 HEG1Q9ULI3 1381 aa5.29□□□□□ -1.56
VPS13B-208ENST00000521037 BDP1A6H8Y1 2624 aa5.29□□□□□ -1.56
VPS13B-208ENST00000521037 PRAMEF22A3QJZ6 481 aa5.29□□□□□ -1.56
VPS13B-208ENST00000521037 UBE2Q2LH0YL09 131 aa5.29□□□□□ -1.56
VPS13B-208ENST00000521037 TMPRSS2O15393 492 aa5.29□□□□□ -1.56
VPS13B-208ENST00000521037 RNMTO43148 476 aaKnown RBP5.29□□□□□ -1.56
VPS13B-208ENST00000521037 ITPKAP23677 461 aa5.29□□□□□ -1.56
VPS13B-208ENST00000521037 USP5P45974 858 aa5.29□□□□□ -1.56
VPS13B-208ENST00000521037 ST5P78524 1137 aa5.29□□□□□ -1.56
VPS13B-208ENST00000521037 KIAA2012Q0VF49 1180 aa5.29□□□□□ -1.56
VPS13B-208ENST00000521037 HLFQ16534 295 aa5.29□□□□□ -1.56
VPS13B-208ENST00000521037 TBC1D10BQ4KMP7 808 aaPredicted RBP5.29□□□□□ -1.56
VPS13B-208ENST00000521037 PLEKHO1Q53GL0 409 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms