RNA–Protein interactions for RNA: ENST00000520140.5

VPS37A-206, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS37A, Length 2,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-206ENST00000520140 PHF20Q9BVI0 1012 aa16.34■□□□□ 0.21
VPS37A-206ENST00000520140 ZMYND12Q9H0C1 365 aa16.34■□□□□ 0.21
VPS37A-206ENST00000520140 SH3GLB2Q9NR46 395 aa16.34■□□□□ 0.21
VPS37A-206ENST00000520140 TMEM260Q9NX78 707 aa16.34■□□□□ 0.21
VPS37A-206ENST00000520140 CYP39A1Q9NYL5 469 aa16.34■□□□□ 0.21
VPS37A-206ENST00000520140 FBXO40Q9UH90 709 aa16.34■□□□□ 0.21
VPS37A-206ENST00000520140 PNMA2Q9UL42 364 aa16.34■□□□□ 0.21
VPS37A-206ENST00000520140 DDX49Q9Y6V7 483 aaKnown RBP16.34■□□□□ 0.21
VPS37A-206ENST00000520140 H3BQV1 296 aa16.34■□□□□ 0.21
VPS37A-206ENST00000520140 MEIS2O14770 477 aa16.34■□□□□ 0.21
VPS37A-206ENST00000520140 FOXN1O15353 648 aa16.34■□□□□ 0.21
VPS37A-206ENST00000520140 HSPA1AP0DMV8 641 aaKnown RBP16.34■□□□□ 0.21
VPS37A-206ENST00000520140 HSPA1BP0DMV9 641 aaKnown RBP16.34■□□□□ 0.21
VPS37A-206ENST00000520140 SYT1P21579 422 aa16.34■□□□□ 0.21
VPS37A-206ENST00000520140 CNTN2Q02246 1040 aa16.34■□□□□ 0.21
VPS37A-206ENST00000520140 IFFO2Q5TF58 517 aa16.34■□□□□ 0.21
VPS37A-206ENST00000520140 JAKMIP3Q5VZ66 844 aa16.34■□□□□ 0.21
VPS37A-206ENST00000520140 FBXO18Q8NFZ0 1043 aa16.34■□□□□ 0.21
VPS37A-206ENST00000520140 C6orf50Q9HD87 102 aa16.34■□□□□ 0.21
VPS37A-206ENST00000520140 GCOM1H8Y6P7 765 aaPredicted RBP16.33■□□□□ 0.21
VPS37A-206ENST00000520140 FKTNO75072 461 aa16.33■□□□□ 0.21
VPS37A-206ENST00000520140 POLR2MP0CAP2 368 aa16.33■□□□□ 0.21
VPS37A-206ENST00000520140 ADORA2AP29274 412 aa16.33■□□□□ 0.21
VPS37A-206ENST00000520140 KIF22Q14807 665 aa16.33■□□□□ 0.21
VPS37A-206ENST00000520140 NPY5RQ15761 445 aa16.33■□□□□ 0.21
VPS37A-206ENST00000520140 FOXD4L5Q5VV16 416 aaPredicted RBP16.33■□□□□ 0.21
VPS37A-206ENST00000520140 MCTP1Q6DN14 999 aa16.33■□□□□ 0.21
VPS37A-206ENST00000520140 MCF2L2Q86YR7 1114 aa16.33■□□□□ 0.21
VPS37A-206ENST00000520140 FOXD4L4Q8WXT5 416 aaPredicted RBP16.33■□□□□ 0.21
VPS37A-206ENST00000520140 RIC8AQ9NPQ8 531 aa16.33■□□□□ 0.21
VPS37A-206ENST00000520140 COL20A1Q9P218 1284 aa16.33■□□□□ 0.21
VPS37A-206ENST00000520140 MMP1P03956 469 aa16.33■□□□□ 0.2
VPS37A-206ENST00000520140 COPB2P35606 906 aa16.33■□□□□ 0.2
VPS37A-206ENST00000520140 DEKP35659 375 aaKnown RBP16.33■□□□□ 0.2
VPS37A-206ENST00000520140 MRPL12P52815 198 aaKnown RBP16.33■□□□□ 0.2
VPS37A-206ENST00000520140 FCGRTP55899 365 aa16.33■□□□□ 0.2
VPS37A-206ENST00000520140 UBXN2AP68543 259 aa16.33■□□□□ 0.2
VPS37A-206ENST00000520140 NR5A1Q13285 461 aa16.33■□□□□ 0.2
VPS37A-206ENST00000520140 PKP1Q13835 747 aa16.33■□□□□ 0.2
VPS37A-206ENST00000520140 NOM1Q5C9Z4 860 aaKnown RBP16.33■□□□□ 0.2
VPS37A-206ENST00000520140 PPP1R18Q6NYC8 613 aa16.33■□□□□ 0.2
VPS37A-206ENST00000520140 LCTP09848 1927 aa16.33■□□□□ 0.2
VPS37A-206ENST00000520140 BTBD18B2RXH4 712 aa16.32■□□□□ 0.2
VPS37A-206ENST00000520140 PTPREP23469 700 aa16.32■□□□□ 0.2
VPS37A-206ENST00000520140 GNA11P29992 359 aa16.32■□□□□ 0.2
VPS37A-206ENST00000520140 DIS3L2Q8IYB7 885 aaKnown RBP16.32■□□□□ 0.2
VPS37A-206ENST00000520140 BLIDQ8IZY5 108 aa16.32■□□□□ 0.2
VPS37A-206ENST00000520140 IPO9Q96P70 1041 aaKnown RBP16.32■□□□□ 0.2
VPS37A-206ENST00000520140 PLXNA1Q9UIW2 1896 aa16.32■□□□□ 0.2
VPS37A-206ENST00000520140 PCDHA4Q9UN74 947 aa16.32■□□□□ 0.2
VPS37A-206ENST00000520140 DPP9Q86TI2 863 aa16.31■□□□□ 0.2
VPS37A-206ENST00000520140 FERMT3Q86UX7 667 aa16.31■□□□□ 0.2
VPS37A-206ENST00000520140 REXO1Q8N1G1 1221 aaKnown RBP16.31■□□□□ 0.2
VPS37A-206ENST00000520140 SYTL5Q8TDW5 730 aaPredicted RBP16.31■□□□□ 0.2
VPS37A-206ENST00000520140 TAAR1Q96RJ0 339 aa16.31■□□□□ 0.2
VPS37A-206ENST00000520140 GABRQQ9UN88 632 aa16.31■□□□□ 0.2
VPS37A-206ENST00000520140 ESYT2A0FGR8 921 aa16.31■□□□□ 0.2
VPS37A-206ENST00000520140 POTEB2H3BUK9 544 aa16.31■□□□□ 0.2
VPS37A-206ENST00000520140 COBLO75128 1261 aa16.31■□□□□ 0.2
VPS37A-206ENST00000520140 CYP2B6P20813 491 aa16.31■□□□□ 0.2
VPS37A-206ENST00000520140 HSD17B4P51659 736 aa16.31■□□□□ 0.2
VPS37A-206ENST00000520140 LBX1P52954 281 aa16.31■□□□□ 0.2
VPS37A-206ENST00000520140 GNL2Q13823 731 aaKnown RBP16.31■□□□□ 0.2
VPS37A-206ENST00000520140 ZFP91Q96JP5 570 aaPredicted RBP16.31■□□□□ 0.2
VPS37A-206ENST00000520140 PFASO15067 1338 aa16.3■□□□□ 0.2
VPS37A-206ENST00000520140 STRNO43815 780 aa16.3■□□□□ 0.2
VPS37A-206ENST00000520140 PDCP20941 246 aa16.3■□□□□ 0.2
VPS37A-206ENST00000520140 KRT2P35908 639 aa16.3■□□□□ 0.2
VPS37A-206ENST00000520140 PRKCZQ05513 592 aa16.3■□□□□ 0.2
VPS37A-206ENST00000520140 GRB14Q14449 540 aa16.3■□□□□ 0.2
VPS37A-206ENST00000520140 PCDHA6Q9UN73 950 aa16.3■□□□□ 0.2
VPS37A-206ENST00000520140 PCDHA8Q9Y5H6 950 aa16.3■□□□□ 0.2
VPS37A-206ENST00000520140 MCM3APO60318 1980 aa16.3■□□□□ 0.2
VPS37A-206ENST00000520140 FAM205CA6NFA0 338 aa16.3■□□□□ 0.2
VPS37A-206ENST00000520140 SPDYE3A6NKU9 549 aa16.3■□□□□ 0.2
VPS37A-206ENST00000520140 KIF28PB7ZC32 967 aa16.3■□□□□ 0.2
VPS37A-206ENST00000520140 STX6O43752 255 aa16.3■□□□□ 0.2
VPS37A-206ENST00000520140 EIF2AK2P19525 551 aaKnown RBP16.3■□□□□ 0.2
VPS37A-206ENST00000520140 SAFBQ15424 915 aaKnown RBP eCLIP16.3■□□□□ 0.2
VPS37A-206ENST00000520140 EARS2Q5JPH6 523 aaKnown RBP16.3■□□□□ 0.2
VPS37A-206ENST00000520140 ERO1AQ96HE7 468 aa16.3■□□□□ 0.2
VPS37A-206ENST00000520140 NUDT12Q9BQG2 462 aa16.3■□□□□ 0.2
VPS37A-206ENST00000520140 ASTN1O14525 1302 aa16.29■□□□□ 0.2
VPS37A-206ENST00000520140 PIK3CDO00329 1044 aa16.29■□□□□ 0.2
VPS37A-206ENST00000520140 HSPA8P11142 646 aaKnown RBP16.29■□□□□ 0.2
VPS37A-206ENST00000520140 FLT3LGP49771 235 aa16.29■□□□□ 0.2
VPS37A-206ENST00000520140 MORN1Q5T089 497 aa16.29■□□□□ 0.2
VPS37A-206ENST00000520140 RGS22Q8NE09 1264 aa16.29■□□□□ 0.2
VPS37A-206ENST00000520140 BICD2Q8TD16 824 aa16.29■□□□□ 0.2
VPS37A-206ENST00000520140 RMDN3Q96TC7 470 aa16.29■□□□□ 0.2
VPS37A-206ENST00000520140 BRMS1Q9HCU9 246 aa16.29■□□□□ 0.2
VPS37A-206ENST00000520140 SLC15A5A6NIM6 579 aa16.28■□□□□ 0.2
VPS37A-206ENST00000520140 CLK2P49760 499 aaKnown RBP16.28■□□□□ 0.2
VPS37A-206ENST00000520140 PIK3AP1Q6ZUJ8 805 aa16.28■□□□□ 0.2
VPS37A-206ENST00000520140 NPLOC4Q8TAT6 608 aa16.28■□□□□ 0.2
VPS37A-206ENST00000520140 GJD2Q9UKL4 321 aa16.28■□□□□ 0.2
VPS37A-206ENST00000520140 TRIM17Q9Y577 477 aa16.28■□□□□ 0.2
VPS37A-206ENST00000520140 MYH7BA7E2Y1 1941 aa16.28■□□□□ 0.2
VPS37A-206ENST00000520140 DNAJC25-GNG10A0A024R161 153 aa16.28■□□□□ 0.2
VPS37A-206ENST00000520140 SOWAHBA6NEL2 793 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms