RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 ALADP13716 330 aa10.03□□□□□ -0.8
CTNNA1-215ENST00000519309 CPT1AP50416 773 aa10.03□□□□□ -0.8
CTNNA1-215ENST00000519309 STAT2P52630 851 aa10.03□□□□□ -0.8
CTNNA1-215ENST00000519309 WDR5P61964 334 aaKnown RBP10.03□□□□□ -0.8
CTNNA1-215ENST00000519309 PTPN11Q06124 597 aaPredicted RBP10.03□□□□□ -0.8
CTNNA1-215ENST00000519309 LRRFIP1Q32MZ4 808 aaKnown RBP10.03□□□□□ -0.8
CTNNA1-215ENST00000519309 TMEM63BQ5T3F8 832 aa10.03□□□□□ -0.8
CTNNA1-215ENST00000519309 NFRKBQ6P4R8 1299 aa10.03□□□□□ -0.8
CTNNA1-215ENST00000519309 CLASRPQ8N2M8 674 aaKnown RBP10.03□□□□□ -0.8
CTNNA1-215ENST00000519309 KIF1BPQ96EK5 621 aa10.03□□□□□ -0.8
CTNNA1-215ENST00000519309 CEP95Q96GE4 821 aa10.03□□□□□ -0.8
CTNNA1-215ENST00000519309 HAUS7Q99871 368 aa10.03□□□□□ -0.8
CTNNA1-215ENST00000519309 PDGFCQ9NRA1 345 aa10.03□□□□□ -0.8
CTNNA1-215ENST00000519309 MTMR4Q9NYA4 1195 aa10.03□□□□□ -0.8
CTNNA1-215ENST00000519309 CYP39A1Q9NYL5 469 aa10.03□□□□□ -0.8
CTNNA1-215ENST00000519309 CACNA1HO95180 2353 aa10.03□□□□□ -0.8
CTNNA1-215ENST00000519309 TRIOO75962 3097 aa10.02□□□□□ -0.81
CTNNA1-215ENST00000519309 RBM47A0AV96 593 aaKnown RBP10.02□□□□□ -0.81
CTNNA1-215ENST00000519309 LCHNA4D1U4 455 aa10.02□□□□□ -0.81
CTNNA1-215ENST00000519309 TTLL1O95922 423 aa10.02□□□□□ -0.81
CTNNA1-215ENST00000519309 CHGBP05060 677 aa10.02□□□□□ -0.81
CTNNA1-215ENST00000519309 BMP3P12645 472 aa10.02□□□□□ -0.81
CTNNA1-215ENST00000519309 ATP5JP18859 108 aa10.02□□□□□ -0.81
CTNNA1-215ENST00000519309 SLC4A3P48751 1232 aa10.02□□□□□ -0.81
CTNNA1-215ENST00000519309 ERVK-21P61565 698 aa10.02□□□□□ -0.81
CTNNA1-215ENST00000519309 RBL2Q08999 1139 aa10.02□□□□□ -0.81
CTNNA1-215ENST00000519309 FAM160B2Q86V87 743 aa10.02□□□□□ -0.81
CTNNA1-215ENST00000519309 ITPRIPQ8IWB1 547 aa10.02□□□□□ -0.81
CTNNA1-215ENST00000519309 FTSJ3Q8IY81 847 aaKnown RBP10.02□□□□□ -0.81
CTNNA1-215ENST00000519309 GMCL1Q96IK5 515 aa10.02□□□□□ -0.81
CTNNA1-215ENST00000519309 MTG1Q9BT17 334 aaPredicted RBP10.02□□□□□ -0.81
CTNNA1-215ENST00000519309 PUS7LQ9H0K6 701 aaKnown RBP10.02□□□□□ -0.81
CTNNA1-215ENST00000519309 FOXD4L1Q9NU39 408 aa10.02□□□□□ -0.81
CTNNA1-215ENST00000519309 CLIP2Q9UDT6 1046 aa10.02□□□□□ -0.81
CTNNA1-215ENST00000519309 DDX49Q9Y6V7 483 aaKnown RBP10.02□□□□□ -0.81
CTNNA1-215ENST00000519309 TECTAO75443 2155 aa10.02□□□□□ -0.81
CTNNA1-215ENST00000519309 KMT2EQ8IZD2 1858 aa10.02□□□□□ -0.81
CTNNA1-215ENST00000519309 KIAA1217Q5T5P2 1943 aa10.01□□□□□ -0.81
CTNNA1-215ENST00000519309 GSG1L2A8MUP6 293 aa10.01□□□□□ -0.81
CTNNA1-215ENST00000519309 DCXO43602 365 aa10.01□□□□□ -0.81
CTNNA1-215ENST00000519309 CXCL10P02778 98 aa10.01□□□□□ -0.81
CTNNA1-215ENST00000519309 IFIT2P09913 472 aaKnown RBP10.01□□□□□ -0.81
CTNNA1-215ENST00000519309 IL9P15248 144 aa10.01□□□□□ -0.81
CTNNA1-215ENST00000519309 KCNJ6P48051 423 aa10.01□□□□□ -0.81
CTNNA1-215ENST00000519309 HNRNPUQ00839 825 aaKnown RBP eCLIP10.01□□□□□ -0.81
CTNNA1-215ENST00000519309 BFSP2Q13515 415 aa10.01□□□□□ -0.81
CTNNA1-215ENST00000519309 COL19A1Q14993 1142 aa10.01□□□□□ -0.81
CTNNA1-215ENST00000519309 PUS10Q3MIT2 529 aaKnown RBP10.01□□□□□ -0.81
CTNNA1-215ENST00000519309 LRRC47Q8N1G4 583 aaKnown RBP10.01□□□□□ -0.81
CTNNA1-215ENST00000519309 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.01□□□□□ -0.81
CTNNA1-215ENST00000519309 CAGE1Q8TC20 777 aa10.01□□□□□ -0.81
CTNNA1-215ENST00000519309 AFAP1L1Q8TED9 768 aa10.01□□□□□ -0.81
CTNNA1-215ENST00000519309 FBXL18Q96ME1 805 aa10.01□□□□□ -0.81
CTNNA1-215ENST00000519309 TRERF1Q96PN7 1200 aa10.01□□□□□ -0.81
CTNNA1-215ENST00000519309 SUGCTQ9HAC7 445 aa10.01□□□□□ -0.81
CTNNA1-215ENST00000519309 MKNK2Q9HBH9 465 aa10.01□□□□□ -0.81
CTNNA1-215ENST00000519309 EPB41L4AQ9HCS5 686 aaPredicted RBP10.01□□□□□ -0.81
CTNNA1-215ENST00000519309 RAD50Q92878 1312 aa10.01□□□□□ -0.81
CTNNA1-215ENST00000519309 POTEB3A0JP26 581 aa10□□□□□ -0.81
CTNNA1-215ENST00000519309 GRXCR2A6NFK2 248 aa10□□□□□ -0.81
CTNNA1-215ENST00000519309 A6NJR5 290 aa10□□□□□ -0.81
CTNNA1-215ENST00000519309 TMEM232C9JQI7 657 aa10□□□□□ -0.81
CTNNA1-215ENST00000519309 NKRFO15226 690 aaKnown RBP eCLIP10□□□□□ -0.81
CTNNA1-215ENST00000519309 GJB5O95377 273 aa10□□□□□ -0.81
CTNNA1-215ENST00000519309 PARNO95453 639 aaKnown RBP10□□□□□ -0.81
CTNNA1-215ENST00000519309 KCNA5P22460 613 aa10□□□□□ -0.81
CTNNA1-215ENST00000519309 ALDH5A1P51649 535 aaPredicted RBP10□□□□□ -0.81
CTNNA1-215ENST00000519309 NBPF20Q3BBV1 942 aa10□□□□□ -0.81
CTNNA1-215ENST00000519309 MUM1L1Q5H9M0 696 aa10□□□□□ -0.81
CTNNA1-215ENST00000519309 SLFN13Q68D06 897 aa10□□□□□ -0.81
CTNNA1-215ENST00000519309 PTCRAQ6ISU1 281 aaPredicted RBP10□□□□□ -0.81
CTNNA1-215ENST00000519309 ZSCAN25Q6NSZ9 544 aa10□□□□□ -0.81
CTNNA1-215ENST00000519309 POTEBQ6S5H4 581 aa10□□□□□ -0.81
CTNNA1-215ENST00000519309 KIAA1211Q6ZU35 1233 aa10□□□□□ -0.81
CTNNA1-215ENST00000519309 EEPD1Q7L9B9 569 aa10□□□□□ -0.81
CTNNA1-215ENST00000519309 CCDC155Q8N6L0 562 aa10□□□□□ -0.81
CTNNA1-215ENST00000519309 RETREG2Q8NC44 543 aa10□□□□□ -0.81
CTNNA1-215ENST00000519309 NEK9Q8TD19 979 aa10□□□□□ -0.81
CTNNA1-215ENST00000519309 CHURC1Q8WUH1 139 aa10□□□□□ -0.81
CTNNA1-215ENST00000519309 STAG1Q8WVM7 1258 aa10□□□□□ -0.81
CTNNA1-215ENST00000519309 TGS1Q96RS0 853 aaKnown RBP10□□□□□ -0.81
CTNNA1-215ENST00000519309 CTAGE1Q96RT6 745 aa10□□□□□ -0.81
CTNNA1-215ENST00000519309 STRBPQ96SI9 672 aaKnown RBP10□□□□□ -0.81
CTNNA1-215ENST00000519309 WDR11Q9BZH6 1224 aa10□□□□□ -0.81
CTNNA1-215ENST00000519309 FTOQ9C0B1 505 aaKnown RBP eCLIP10□□□□□ -0.81
CTNNA1-215ENST00000519309 BOLA2Q9H3K6 86 aa10□□□□□ -0.81
CTNNA1-215ENST00000519309 ZNF287Q9HBT7 754 aa10□□□□□ -0.81
CTNNA1-215ENST00000519309 ADD3Q9UEY8 706 aaKnown RBP10□□□□□ -0.81
CTNNA1-215ENST00000519309 USP34Q70CQ2 3546 aa9.99□□□□□ -0.81
CTNNA1-215ENST00000519309 CACNA1AO00555 2505 aa9.99□□□□□ -0.81
CTNNA1-215ENST00000519309 LINC01553A4QN01 128 aa9.99□□□□□ -0.81
CTNNA1-215ENST00000519309 KPNA6O60684 536 aa9.99□□□□□ -0.81
CTNNA1-215ENST00000519309 EFCAB14O75071 495 aa9.99□□□□□ -0.81
CTNNA1-215ENST00000519309 MYL3P08590 195 aa9.99□□□□□ -0.81
CTNNA1-215ENST00000519309 ALAS1P13196 640 aa9.99□□□□□ -0.81
CTNNA1-215ENST00000519309 SSTR3P32745 418 aaPredicted RBP9.99□□□□□ -0.81
CTNNA1-215ENST00000519309 DEFB103AP81534 67 aa9.99□□□□□ -0.81
CTNNA1-215ENST00000519309 ZP2Q05996 745 aa9.99□□□□□ -0.81
CTNNA1-215ENST00000519309 GPNMBQ14956 572 aa9.99□□□□□ -0.81
CTNNA1-215ENST00000519309 CSPP1Q1MSJ5 1256 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms