RNA–Protein interactions for RNA: ENST00000518930.1

PCM1-209, Transcript of pericentriolar material 1, human

TSL 3

Gene PCM1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-209	ENST00000518930	USP6NL	Q92738	828 aa		27.91	■■■□□ 2.06
PCM1-209	ENST00000518930	CUL5	Q93034	780 aa		27.91	■■■□□ 2.06
PCM1-209	ENST00000518930	OPLAH	O14841	1288 aa		27.9	■■■□□ 2.06
PCM1-209	ENST00000518930	XBP1	P17861	261 aa		27.9	■■■□□ 2.06
PCM1-209	ENST00000518930	RPS6	P62753	249 aa	Known RBP	27.9	■■■□□ 2.06
PCM1-209	ENST00000518930	PKN2	Q16513	984 aa	Known RBP	27.9	■■■□□ 2.06
PCM1-209	ENST00000518930	MAP3K20	Q9NYL2	800 aa	Known RBP	27.9	■■■□□ 2.06
PCM1-209	ENST00000518930	PTPN22	Q9Y2R2	807 aa		27.9	■■■□□ 2.06
PCM1-209	ENST00000518930	GCOM1	H8Y6P7	765 aa	Predicted RBP	27.89	■■■□□ 2.06
PCM1-209	ENST00000518930	DTNB	O60941	627 aa		27.89	■■■□□ 2.06
PCM1-209	ENST00000518930	COBL	O75128	1261 aa		27.89	■■■□□ 2.06
PCM1-209	ENST00000518930	HOXC6	P09630	235 aa		27.89	■■■□□ 2.06
PCM1-209	ENST00000518930	POLR2M	P0CAP2	368 aa		27.89	■■■□□ 2.06
PCM1-209	ENST00000518930	XRCC5	P13010	732 aa	Known RBP	27.89	■■■□□ 2.06
PCM1-209	ENST00000518930	ADCY7	P51828	1080 aa		27.89	■■■□□ 2.06
PCM1-209	ENST00000518930	SMARCC2	Q8TAQ2	1214 aa		27.89	■■■□□ 2.06
PCM1-209	ENST00000518930	PSTPIP2	Q9H939	334 aa		27.89	■■■□□ 2.06
PCM1-209	ENST00000518930	SH3GLB2	Q9NR46	395 aa		27.89	■■■□□ 2.06
PCM1-209	ENST00000518930	VPS54	Q9P1Q0	977 aa		27.89	■■■□□ 2.06
PCM1-209	ENST00000518930	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	27.89	■■■□□ 2.06
PCM1-209	ENST00000518930	LCT	P09848	1927 aa		27.88	■■■□□ 2.05
PCM1-209	ENST00000518930	DNAJC25-GNG10	A0A024R161	153 aa		27.88	■■■□□ 2.05
PCM1-209	ENST00000518930	TYW1B	Q6NUM6	668 aa		27.88	■■■□□ 2.05
PCM1-209	ENST00000518930	TRMT44	Q8IYL2	757 aa	Known RBP	27.88	■■■□□ 2.05
PCM1-209	ENST00000518930	ALG1	Q9BT22	464 aa		27.88	■■■□□ 2.05
PCM1-209	ENST00000518930	GLT8D2	Q9H1C3	349 aa		27.88	■■■□□ 2.05
PCM1-209	ENST00000518930	PTCH2	Q9Y6C5	1203 aa		27.88	■■■□□ 2.05
PCM1-209	ENST00000518930	SMCO2	A6NFE2	343 aa		27.87	■■■□□ 2.05
PCM1-209	ENST00000518930	HSD17B4	P51659	736 aa		27.87	■■■□□ 2.05
PCM1-209	ENST00000518930	GHRHR	Q02643	423 aa		27.87	■■■□□ 2.05
PCM1-209	ENST00000518930	ZNF792	Q3KQV3	632 aa		27.87	■■■□□ 2.05
PCM1-209	ENST00000518930	FAM184A	Q8NB25	1140 aa		27.87	■■■□□ 2.05
PCM1-209	ENST00000518930	TBC1D5	Q92609	795 aa		27.87	■■■□□ 2.05
PCM1-209	ENST00000518930	AIFM3	Q96NN9	605 aa		27.87	■■■□□ 2.05
PCM1-209	ENST00000518930	DIS3	Q9Y2L1	958 aa	Known RBP	27.87	■■■□□ 2.05
PCM1-209	ENST00000518930	ESYT2	A0FGR8	921 aa		27.86	■■■□□ 2.05
PCM1-209	ENST00000518930	ADCY3	O60266	1144 aa		27.86	■■■□□ 2.05
PCM1-209	ENST00000518930	FDPS	P14324	419 aa	Known RBP	27.86	■■■□□ 2.05
PCM1-209	ENST00000518930	MRPL12	P52815	198 aa	Known RBP	27.86	■■■□□ 2.05
PCM1-209	ENST00000518930	CNTN2	Q02246	1040 aa		27.86	■■■□□ 2.05
PCM1-209	ENST00000518930	FBXO46	Q6PJ61	603 aa	Predicted RBP	27.86	■■■□□ 2.05
PCM1-209	ENST00000518930	TEX2	Q8IWB9	1127 aa		27.86	■■■□□ 2.05
PCM1-209	ENST00000518930	FAM177A1	Q8N128	213 aa	Predicted RBP	27.86	■■■□□ 2.05
PCM1-209	ENST00000518930	FAM133A	Q8N9E0	248 aa		27.86	■■■□□ 2.05
PCM1-209	ENST00000518930	SLAIN1	Q8ND83	568 aa		27.86	■■■□□ 2.05
PCM1-209	ENST00000518930	NPLOC4	Q8TAT6	608 aa		27.86	■■■□□ 2.05
PCM1-209	ENST00000518930	SYTL5	Q8TDW5	730 aa	Predicted RBP	27.86	■■■□□ 2.05
PCM1-209	ENST00000518930	C6orf50	Q9HD87	102 aa		27.86	■■■□□ 2.05
PCM1-209	ENST00000518930	RIC8A	Q9NPQ8	531 aa		27.86	■■■□□ 2.05
PCM1-209	ENST00000518930	ADD3	Q9UEY8	706 aa	Known RBP	27.86	■■■□□ 2.05
PCM1-209	ENST00000518930	KIF3A	Q9Y496	699 aa		27.86	■■■□□ 2.05
PCM1-209	ENST00000518930	GNA11	P29992	359 aa		27.85	■■■□□ 2.05
PCM1-209	ENST00000518930	HOXA13	P31271	388 aa	Predicted RBP	27.85	■■■□□ 2.05
PCM1-209	ENST00000518930	NLRP5	P59047	1200 aa		27.85	■■■□□ 2.05
PCM1-209	ENST00000518930	CUL4A	Q13619	759 aa		27.85	■■■□□ 2.05
PCM1-209	ENST00000518930	MAML3	Q96JK9	1138 aa		27.85	■■■□□ 2.05
PCM1-209	ENST00000518930	PIK3CD	O00329	1044 aa		27.84	■■■□□ 2.05
PCM1-209	ENST00000518930	TRIM29	Q14134	588 aa		27.84	■■■□□ 2.05
PCM1-209	ENST00000518930	ZNF467	Q7Z7K2	595 aa	Predicted RBP	27.84	■■■□□ 2.05
PCM1-209	ENST00000518930	BICD2	Q8TD16	824 aa		27.84	■■■□□ 2.05
PCM1-209	ENST00000518930	PXYLP1	Q8TE99	480 aa		27.84	■■■□□ 2.05
PCM1-209	ENST00000518930	MPHOSPH6	Q99547	160 aa	Known RBP	27.84	■■■□□ 2.05
PCM1-209	ENST00000518930	ZMYND12	Q9H0C1	365 aa		27.84	■■■□□ 2.05
PCM1-209	ENST00000518930	SMC3	Q9UQE7	1217 aa		27.84	■■■□□ 2.05
PCM1-209	ENST00000518930	GRK4	P32298	578 aa		27.83	■■■□□ 2.05
PCM1-209	ENST00000518930	CCL14	Q16627	93 aa		27.83	■■■□□ 2.05
PCM1-209	ENST00000518930	OLFML2B	Q68BL8	750 aa		27.83	■■■□□ 2.05
PCM1-209	ENST00000518930	USP17L6P	Q6QN14	398 aa		27.83	■■■□□ 2.05
PCM1-209	ENST00000518930	FCHSD1	Q86WN1	690 aa		27.83	■■■□□ 2.05
PCM1-209	ENST00000518930	DNER	Q8NFT8	737 aa		27.83	■■■□□ 2.05
PCM1-209	ENST00000518930	SOWAHB	A6NEL2	793 aa		27.82	■■■□□ 2.04
PCM1-209	ENST00000518930	ELN	P15502	786 aa		27.82	■■■□□ 2.04
PCM1-209	ENST00000518930	UBE2S	Q16763	222 aa		27.82	■■■□□ 2.04
PCM1-209	ENST00000518930	TRIB2	Q92519	343 aa		27.82	■■■□□ 2.04
PCM1-209	ENST00000518930	COL20A1	Q9P218	1284 aa		27.82	■■■□□ 2.04
PCM1-209	ENST00000518930	SPDYE3	A6NKU9	549 aa		27.81	■■■□□ 2.04
PCM1-209	ENST00000518930		B4DLN1	442 aa		27.81	■■■□□ 2.04
PCM1-209	ENST00000518930	MEIS2	O14770	477 aa		27.81	■■■□□ 2.04
PCM1-209	ENST00000518930	HMGCR	P04035	888 aa		27.81	■■■□□ 2.04
PCM1-209	ENST00000518930	HSP90AA1	P07900	732 aa	Known RBP	27.81	■■■□□ 2.04
PCM1-209	ENST00000518930	ALDH5A1	P51649	535 aa	Predicted RBP	27.81	■■■□□ 2.04
PCM1-209	ENST00000518930	FOSB	P53539	338 aa		27.81	■■■□□ 2.04
PCM1-209	ENST00000518930	SLC9C1	Q4G0N8	1177 aa		27.81	■■■□□ 2.04
PCM1-209	ENST00000518930	MFSD14C	Q5VZR4	134 aa		27.81	■■■□□ 2.04
PCM1-209	ENST00000518930	MSL3	Q8N5Y2	521 aa	Known RBP	27.81	■■■□□ 2.04
PCM1-209	ENST00000518930	NSUN6	Q8TEA1	469 aa	Known RBP	27.81	■■■□□ 2.04
PCM1-209	ENST00000518930	PURB	Q96QR8	312 aa	Known RBP	27.81	■■■□□ 2.04
PCM1-209	ENST00000518930	RMDN3	Q96TC7	470 aa		27.81	■■■□□ 2.04
PCM1-209	ENST00000518930	LOC102724159	A0A0B4J2E5	919 aa		27.8	■■■□□ 2.04
PCM1-209	ENST00000518930	ASB14	A6NK59	587 aa		27.8	■■■□□ 2.04
PCM1-209	ENST00000518930	GJB2	P29033	226 aa		27.8	■■■□□ 2.04
PCM1-209	ENST00000518930	BECN1	Q14457	450 aa		27.8	■■■□□ 2.04
PCM1-209	ENST00000518930	PWP2	Q15269	919 aa	Known RBP	27.8	■■■□□ 2.04
PCM1-209	ENST00000518930	ARHGEF16	Q5VV41	709 aa		27.8	■■■□□ 2.04
PCM1-209	ENST00000518930	GALNT17	Q6IS24	598 aa		27.8	■■■□□ 2.04
PCM1-209	ENST00000518930	REXO1	Q8N1G1	1221 aa	Known RBP	27.8	■■■□□ 2.04
PCM1-209	ENST00000518930	SHISA4	Q96DD7	197 aa		27.8	■■■□□ 2.04
PCM1-209	ENST00000518930	FGD4	Q96M96	766 aa		27.8	■■■□□ 2.04
PCM1-209	ENST00000518930	TAAR1	Q96RJ0	339 aa		27.8	■■■□□ 2.04
PCM1-209	ENST00000518930	TINF2	Q9BSI4	451 aa		27.8	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms