RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 MCF2L2Q86YR7 1114 aa17.08■□□□□ 0.32
TRAPPC9-205ENST00000518839 CKAP2LQ8IYA6 745 aa17.08■□□□□ 0.32
TRAPPC9-205ENST00000518839 CNNM3Q8NE01 707 aa17.08■□□□□ 0.32
TRAPPC9-205ENST00000518839 SLC38A10Q9HBR0 1119 aa17.08■□□□□ 0.32
TRAPPC9-205ENST00000518839 MRVI1Q9Y6F6 885 aa17.08■□□□□ 0.32
TRAPPC9-205ENST00000518839 RLFQ13129 1914 aa17.08■□□□□ 0.32
TRAPPC9-205ENST00000518839 POTECB2RU33 542 aa17.07■□□□□ 0.32
TRAPPC9-205ENST00000518839 GCOM1H8Y6P7 765 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC9-205ENST00000518839 POLR2MP0CAP2 368 aa17.07■□□□□ 0.32
TRAPPC9-205ENST00000518839 HMGCS2P54868 508 aa17.07■□□□□ 0.32
TRAPPC9-205ENST00000518839 PPATQ06203 517 aa17.07■□□□□ 0.32
TRAPPC9-205ENST00000518839 TYRO3Q06418 890 aa17.07■□□□□ 0.32
TRAPPC9-205ENST00000518839 ZRSR1Q15695 479 aaKnown RBP17.07■□□□□ 0.32
TRAPPC9-205ENST00000518839 TMEM266Q2M3C6 531 aa17.07■□□□□ 0.32
TRAPPC9-205ENST00000518839 ERO1BQ86YB8 467 aa17.07■□□□□ 0.32
TRAPPC9-205ENST00000518839 SYMPKQ92797 1274 aaKnown RBP17.07■□□□□ 0.32
TRAPPC9-205ENST00000518839 RAB34Q9BZG1 259 aa17.07■□□□□ 0.32
TRAPPC9-205ENST00000518839 MAP3K20Q9NYL2 800 aaKnown RBP17.07■□□□□ 0.32
TRAPPC9-205ENST00000518839 CCPG1Q9ULG6 757 aa17.07■□□□□ 0.32
TRAPPC9-205ENST00000518839 FZD1Q9UP38 647 aa17.07■□□□□ 0.32
TRAPPC9-205ENST00000518839 SMCHD1A6NHR9 2005 aa17.07■□□□□ 0.32
TRAPPC9-205ENST00000518839 COL11A1P12107 1806 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC9-205ENST00000518839 CYP3A7-CYP3A51PA0A087WV96 503 aa17.06■□□□□ 0.32
TRAPPC9-205ENST00000518839 DCAF8L1A6NGE4 600 aa17.06■□□□□ 0.32
TRAPPC9-205ENST00000518839 POLR2DO15514 142 aaKnown RBP17.06■□□□□ 0.32
TRAPPC9-205ENST00000518839 CYP3A7P24462 503 aa17.06■□□□□ 0.32
TRAPPC9-205ENST00000518839 SREBF1P36956 1147 aa17.06■□□□□ 0.32
TRAPPC9-205ENST00000518839 OAZ1P54368 228 aa17.06■□□□□ 0.32
TRAPPC9-205ENST00000518839 TTLL12Q14166 644 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC9-205ENST00000518839 CALCRLQ16602 461 aa17.06■□□□□ 0.32
TRAPPC9-205ENST00000518839 SPECC1Q5M775 1068 aa17.06■□□□□ 0.32
TRAPPC9-205ENST00000518839 SAMD1Q6SPF0 538 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC9-205ENST00000518839 MAF1Q9H063 256 aa17.06■□□□□ 0.32
TRAPPC9-205ENST00000518839 RBSNQ9H1K0 784 aa17.06■□□□□ 0.32
TRAPPC9-205ENST00000518839 TMEM60Q9H2L4 133 aa17.06■□□□□ 0.32
TRAPPC9-205ENST00000518839 CLEC11AQ9Y240 323 aa17.06■□□□□ 0.32
TRAPPC9-205ENST00000518839 RABGAP1Q9Y3P9 1069 aa17.06■□□□□ 0.32
TRAPPC9-205ENST00000518839 GOLGB1Q14789 3259 aaKnown RBP17.05■□□□□ 0.32
TRAPPC9-205ENST00000518839 ZNF536O15090 1300 aa17.05■□□□□ 0.32
TRAPPC9-205ENST00000518839 SOCS7O14512 581 aa17.05■□□□□ 0.32
TRAPPC9-205ENST00000518839 CXCL11O14625 94 aa17.05■□□□□ 0.32
TRAPPC9-205ENST00000518839 OPLAHO14841 1288 aa17.05■□□□□ 0.32
TRAPPC9-205ENST00000518839 DSG3P32926 999 aa17.05■□□□□ 0.32
TRAPPC9-205ENST00000518839 GHRHRQ02643 423 aa17.05■□□□□ 0.32
TRAPPC9-205ENST00000518839 COG2Q14746 738 aa17.05■□□□□ 0.32
TRAPPC9-205ENST00000518839 STX1AQ16623 288 aa17.05■□□□□ 0.32
TRAPPC9-205ENST00000518839 UVSSAQ2YD98 709 aa17.05■□□□□ 0.32
TRAPPC9-205ENST00000518839 CATSPERGQ6ZRH7 1159 aa17.05■□□□□ 0.32
TRAPPC9-205ENST00000518839 CEP57L1Q8IYX8 460 aa17.05■□□□□ 0.32
TRAPPC9-205ENST00000518839 ANP32BQ92688 251 aaKnown RBP17.05■□□□□ 0.32
TRAPPC9-205ENST00000518839 MBOAT7Q96N66 472 aa17.05■□□□□ 0.32
TRAPPC9-205ENST00000518839 MTMR9Q96QG7 549 aa17.05■□□□□ 0.32
TRAPPC9-205ENST00000518839 CCSER1Q9C0I3 900 aa17.05■□□□□ 0.32
TRAPPC9-205ENST00000518839 ANO10Q9NW15 660 aa17.05■□□□□ 0.32
TRAPPC9-205ENST00000518839 KIAA1468Q9P260 1216 aa17.05■□□□□ 0.32
TRAPPC9-205ENST00000518839 CCDC39Q9UFE4 941 aa17.05■□□□□ 0.32
TRAPPC9-205ENST00000518839 DDX25Q9UHL0 483 aaKnown RBP17.05■□□□□ 0.32
TRAPPC9-205ENST00000518839 SPDYE5A6NIY4 337 aa17.04■□□□□ 0.32
TRAPPC9-205ENST00000518839 TDP2O95551 362 aa17.04■□□□□ 0.32
TRAPPC9-205ENST00000518839 CFBP00751 764 aa17.04■□□□□ 0.32
TRAPPC9-205ENST00000518839 CYP3A4P08684 503 aa17.04■□□□□ 0.32
TRAPPC9-205ENST00000518839 UBA7P41226 1012 aa17.04■□□□□ 0.32
TRAPPC9-205ENST00000518839 FXR2P51116 673 aaKnown RBP eCLIP17.04■□□□□ 0.32
TRAPPC9-205ENST00000518839 ARHGAP4P98171 946 aa17.04■□□□□ 0.32
TRAPPC9-205ENST00000518839 IL17AQ16552 155 aa17.04■□□□□ 0.32
TRAPPC9-205ENST00000518839 LONRF3Q496Y0 759 aa17.04■□□□□ 0.32
TRAPPC9-205ENST00000518839 POTEDQ86YR6 584 aa17.04■□□□□ 0.32
TRAPPC9-205ENST00000518839 IQUBQ8NA54 791 aa17.04■□□□□ 0.32
TRAPPC9-205ENST00000518839 PROCA1Q8NCQ7 364 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC9-205ENST00000518839 CRYGNQ8WXF5 182 aa17.04■□□□□ 0.32
TRAPPC9-205ENST00000518839 EPSTI1Q96J88 318 aa17.04■□□□□ 0.32
TRAPPC9-205ENST00000518839 HOXC10Q9NYD6 342 aa17.04■□□□□ 0.32
TRAPPC9-205ENST00000518839 VWA5AO00534 786 aa17.03■□□□□ 0.32
TRAPPC9-205ENST00000518839 ATP2A1O14983 1001 aa17.03■□□□□ 0.32
TRAPPC9-205ENST00000518839 TBX3O15119 743 aa17.03■□□□□ 0.32
TRAPPC9-205ENST00000518839 MARCH6O60337 910 aa17.03■□□□□ 0.32
TRAPPC9-205ENST00000518839 SLFN14P0C7P3 912 aa17.03■□□□□ 0.32
TRAPPC9-205ENST00000518839 XRCC6P12956 609 aaKnown RBP eCLIP17.03■□□□□ 0.32
TRAPPC9-205ENST00000518839 CIITAP33076 1130 aa17.03■□□□□ 0.32
TRAPPC9-205ENST00000518839 HSD17B4P51659 736 aa17.03■□□□□ 0.32
TRAPPC9-205ENST00000518839 PPIL2Q13356 520 aa17.03■□□□□ 0.32
TRAPPC9-205ENST00000518839 PDIA5Q14554 519 aa17.03■□□□□ 0.32
TRAPPC9-205ENST00000518839 TKFCQ3LXA3 575 aa17.03■□□□□ 0.32
TRAPPC9-205ENST00000518839 SERTAD1Q9UHV2 236 aa17.03■□□□□ 0.32
TRAPPC9-205ENST00000518839 ADAMTS5Q9UNA0 930 aa17.03■□□□□ 0.32
TRAPPC9-205ENST00000518839 SLC26A4O43511 780 aa17.02■□□□□ 0.32
TRAPPC9-205ENST00000518839 ACTN4O43707 911 aaKnown RBP17.02■□□□□ 0.32
TRAPPC9-205ENST00000518839 EDIL3O43854 480 aa17.02■□□□□ 0.32
TRAPPC9-205ENST00000518839 FKBP1BP68106 108 aa17.02■□□□□ 0.32
TRAPPC9-205ENST00000518839 DGKZQ13574 1117 aa17.02■□□□□ 0.32
TRAPPC9-205ENST00000518839 Q4G0T1 1027 aa17.02■□□□□ 0.32
TRAPPC9-205ENST00000518839 USP49Q70CQ1 688 aa17.02■□□□□ 0.32
TRAPPC9-205ENST00000518839 SLFN12Q8IYM2 578 aa17.02■□□□□ 0.32
TRAPPC9-205ENST00000518839 CPXCR1Q8N123 301 aa17.02■□□□□ 0.32
TRAPPC9-205ENST00000518839 PDILTQ8N807 584 aa17.02■□□□□ 0.32
TRAPPC9-205ENST00000518839 IGSF22Q8N9C0 903 aa17.02■□□□□ 0.32
TRAPPC9-205ENST00000518839 FAM200AQ8TCP9 573 aa17.02■□□□□ 0.32
TRAPPC9-205ENST00000518839 DHX58Q96C10 678 aa17.02■□□□□ 0.32
TRAPPC9-205ENST00000518839 ATG4CQ96DT6 458 aa17.02■□□□□ 0.32
TRAPPC9-205ENST00000518839 AGBL1Q96MI9 1066 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms