RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 PRMT2P55345 433 aa10.87□□□□□ -0.67
CLN8-203ENST00000518780 LACTBP83111 547 aaPredicted RBP10.87□□□□□ -0.67
CLN8-203ENST00000518780 KRT40Q6A162 431 aa10.87□□□□□ -0.67
CLN8-203ENST00000518780 TYW1BQ6NUM6 668 aa10.87□□□□□ -0.67
CLN8-203ENST00000518780 RNF207Q6ZRF8 634 aa10.87□□□□□ -0.67
CLN8-203ENST00000518780 BLIDQ8IZY5 108 aa10.87□□□□□ -0.67
CLN8-203ENST00000518780 REXO1Q8N1G1 1221 aaKnown RBP10.87□□□□□ -0.67
CLN8-203ENST00000518780 DNERQ8NFT8 737 aa10.87□□□□□ -0.67
CLN8-203ENST00000518780 SOCS4Q8WXH5 440 aa10.87□□□□□ -0.67
CLN8-203ENST00000518780 MMP19Q99542 508 aa10.87□□□□□ -0.67
CLN8-203ENST00000518780 MPHOSPH6Q99547 160 aaKnown RBP10.87□□□□□ -0.67
CLN8-203ENST00000518780 PORCNQ9H237 461 aa10.87□□□□□ -0.67
CLN8-203ENST00000518780 FOXP1Q9H334 677 aaPredicted RBP10.87□□□□□ -0.67
CLN8-203ENST00000518780 EHMT1Q9H9B1 1298 aa10.87□□□□□ -0.67
CLN8-203ENST00000518780 CYP39A1Q9NYL5 469 aa10.87□□□□□ -0.67
CLN8-203ENST00000518780 ADD3Q9UEY8 706 aaKnown RBP10.87□□□□□ -0.67
CLN8-203ENST00000518780 DIS3Q9Y2L1 958 aaKnown RBP10.87□□□□□ -0.67
CLN8-203ENST00000518780 RLFQ13129 1914 aa10.86□□□□□ -0.67
CLN8-203ENST00000518780 NFIBO00712 420 aa10.86□□□□□ -0.67
CLN8-203ENST00000518780 MEIS2O14770 477 aa10.86□□□□□ -0.67
CLN8-203ENST00000518780 TNPO2O14787 897 aaKnown RBP10.86□□□□□ -0.67
CLN8-203ENST00000518780 OPLAHO14841 1288 aa10.86□□□□□ -0.67
CLN8-203ENST00000518780 CFBP00751 764 aa10.86□□□□□ -0.67
CLN8-203ENST00000518780 HOXC6P09630 235 aa10.86□□□□□ -0.67
CLN8-203ENST00000518780 SYT1P21579 422 aa10.86□□□□□ -0.67
CLN8-203ENST00000518780 KRT2P35908 639 aa10.86□□□□□ -0.67
CLN8-203ENST00000518780 SLC4A3P48751 1232 aa10.86□□□□□ -0.67
CLN8-203ENST00000518780 CLK2P49760 499 aaKnown RBP10.86□□□□□ -0.67
CLN8-203ENST00000518780 GRB14Q14449 540 aa10.86□□□□□ -0.67
CLN8-203ENST00000518780 MUM1L1Q5H9M0 696 aa10.86□□□□□ -0.67
CLN8-203ENST00000518780 XRRA1Q6P2D8 792 aa10.86□□□□□ -0.67
CLN8-203ENST00000518780 NSMFQ6X4W1 530 aa10.86□□□□□ -0.67
CLN8-203ENST00000518780 GPR142Q7Z601 462 aa10.86□□□□□ -0.67
CLN8-203ENST00000518780 MSL3Q8N5Y2 521 aaKnown RBP10.86□□□□□ -0.67
CLN8-203ENST00000518780 AIFM3Q96NN9 605 aa10.86□□□□□ -0.67
CLN8-203ENST00000518780 R3HDMLQ9H3Y0 253 aa10.86□□□□□ -0.67
CLN8-203ENST00000518780 EFCC1Q9HA90 598 aa10.86□□□□□ -0.67
CLN8-203ENST00000518780 A1CFQ9NQ94 594 aaKnown RBP10.86□□□□□ -0.67
CLN8-203ENST00000518780 HOMER2Q9NSB8 354 aa10.86□□□□□ -0.67
CLN8-203ENST00000518780 CIZ1Q9ULV3 898 aaPredicted RBP10.86□□□□□ -0.67
CLN8-203ENST00000518780 A0A0G2JMZ2 1700 aa10.85□□□□□ -0.67
CLN8-203ENST00000518780 DNAJC25-GNG10A0A024R161 153 aa10.85□□□□□ -0.67
CLN8-203ENST00000518780 SPDYE3A6NKU9 549 aa10.85□□□□□ -0.67
CLN8-203ENST00000518780 POTEB2H3BUK9 544 aa10.85□□□□□ -0.67
CLN8-203ENST00000518780 M0R2N6 131 aa10.85□□□□□ -0.67
CLN8-203ENST00000518780 STX6O43752 255 aa10.85□□□□□ -0.67
CLN8-203ENST00000518780 XRCC5P13010 732 aaKnown RBP10.85□□□□□ -0.67
CLN8-203ENST00000518780 U2AF2P26368 475 aaKnown RBP eCLIP10.85□□□□□ -0.67
CLN8-203ENST00000518780 PSMC4P43686 418 aa10.85□□□□□ -0.67
CLN8-203ENST00000518780 RPS6P62753 249 aaKnown RBP10.85□□□□□ -0.67
CLN8-203ENST00000518780 NUCB2P80303 420 aa10.85□□□□□ -0.67
CLN8-203ENST00000518780 BAATQ14032 418 aaPredicted RBP10.85□□□□□ -0.67
CLN8-203ENST00000518780 MORN1Q5T089 497 aa10.85□□□□□ -0.67
CLN8-203ENST00000518780 WDR78Q5VTH9 848 aa10.85□□□□□ -0.67
CLN8-203ENST00000518780 KRT25Q7Z3Z0 450 aa10.85□□□□□ -0.67
CLN8-203ENST00000518780 ZNF467Q7Z7K2 595 aaPredicted RBP10.85□□□□□ -0.67
CLN8-203ENST00000518780 DIS3L2Q8IYB7 885 aaKnown RBP10.85□□□□□ -0.67
CLN8-203ENST00000518780 TRMT44Q8IYL2 757 aaKnown RBP10.85□□□□□ -0.67
CLN8-203ENST00000518780 SYTL5Q8TDW5 730 aaPredicted RBP10.85□□□□□ -0.67
CLN8-203ENST00000518780 NSUN6Q8TEA1 469 aaKnown RBP10.85□□□□□ -0.67
CLN8-203ENST00000518780 IWS1Q96ST2 819 aa10.85□□□□□ -0.67
CLN8-203ENST00000518780 NUDT12Q9BQG2 462 aa10.85□□□□□ -0.67
CLN8-203ENST00000518780 ZSCAN16Q9H4T2 348 aaPredicted RBP10.85□□□□□ -0.67
CLN8-203ENST00000518780 PEX10O60683 326 aa10.84□□□□□ -0.67
CLN8-203ENST00000518780 ADORA2AP29274 412 aa10.84□□□□□ -0.67
CLN8-203ENST00000518780 RGS2P41220 211 aa10.84□□□□□ -0.67
CLN8-203ENST00000518780 MAP2K5Q13163 448 aa10.84□□□□□ -0.67
CLN8-203ENST00000518780 IRF5Q13568 498 aa10.84□□□□□ -0.67
CLN8-203ENST00000518780 GNL2Q13823 731 aaKnown RBP10.84□□□□□ -0.67
CLN8-203ENST00000518780 NPY5RQ15761 445 aa10.84□□□□□ -0.67
CLN8-203ENST00000518780 USP17L6PQ6QN14 398 aa10.84□□□□□ -0.67
CLN8-203ENST00000518780 BRAPQ7Z569 592 aa10.84□□□□□ -0.67
CLN8-203ENST00000518780 DPP9Q86TI2 863 aa10.84□□□□□ -0.67
CLN8-203ENST00000518780 FAM133AQ8N9E0 248 aa10.84□□□□□ -0.67
CLN8-203ENST00000518780 ZNF296Q8WUU4 475 aaPredicted RBP10.84□□□□□ -0.67
CLN8-203ENST00000518780 USP6NLQ92738 828 aa10.84□□□□□ -0.67
CLN8-203ENST00000518780 NAP1L4Q99733 375 aaKnown RBP10.84□□□□□ -0.67
CLN8-203ENST00000518780 FOXD4L1Q9NU39 408 aa10.84□□□□□ -0.67
CLN8-203ENST00000518780 GJD2Q9UKL4 321 aa10.84□□□□□ -0.67
CLN8-203ENST00000518780 KCNJ14Q9UNX9 436 aa10.84□□□□□ -0.67
CLN8-203ENST00000518780 CCDC194A0A1B0GVG4 234 aa10.83□□□□□ -0.68
CLN8-203ENST00000518780 ASB14A6NK59 587 aa10.83□□□□□ -0.68
CLN8-203ENST00000518780 STAM2O75886 525 aa10.83□□□□□ -0.68
CLN8-203ENST00000518780 DDIT3P35638 169 aa10.83□□□□□ -0.68
CLN8-203ENST00000518780 TRAPPC10P48553 1259 aa10.83□□□□□ -0.68
CLN8-203ENST00000518780 CTCFP49711 727 aaPredicted RBP10.83□□□□□ -0.68
CLN8-203ENST00000518780 USP11P51784 963 aa10.83□□□□□ -0.68
CLN8-203ENST00000518780 NONOQ15233 471 aaKnown RBP eCLIP10.83□□□□□ -0.68
CLN8-203ENST00000518780 ZNF792Q3KQV3 632 aa10.83□□□□□ -0.68
CLN8-203ENST00000518780 NOSTRINQ8IVI9 506 aa10.83□□□□□ -0.68
CLN8-203ENST00000518780 SPRYD3Q8NCJ5 442 aa10.83□□□□□ -0.68
CLN8-203ENST00000518780 TBC1D5Q92609 795 aa10.83□□□□□ -0.68
CLN8-203ENST00000518780 SHISA4Q96DD7 197 aa10.83□□□□□ -0.68
CLN8-203ENST00000518780 TRIM47Q96LD4 638 aa10.83□□□□□ -0.68
CLN8-203ENST00000518780 RMDN3Q96TC7 470 aa10.83□□□□□ -0.68
CLN8-203ENST00000518780 BIN2Q9UBW5 565 aaPredicted RBP10.83□□□□□ -0.68
CLN8-203ENST00000518780 SRRDQ9UH36 339 aa10.83□□□□□ -0.68
CLN8-203ENST00000518780 PCDHA6Q9UN73 950 aa10.83□□□□□ -0.68
CLN8-203ENST00000518780 MTMR6Q9Y217 621 aa10.83□□□□□ -0.68
CLN8-203ENST00000518780 PCDHA8Q9Y5H6 950 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms