RNA–Protein interactions for RNA: ENST00000518074.5

SPIDR-206, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 2,819 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-206ENST00000518074 CERKLQ49MI3 558 aaPredicted RBP12.47□□□□□ -0.41
SPIDR-206ENST00000518074 TREML2Q5T2D2 321 aa12.47□□□□□ -0.41
SPIDR-206ENST00000518074 IFIT1BQ5T764 474 aaKnown RBP12.47□□□□□ -0.41
SPIDR-206ENST00000518074 C16orf45Q96MC5 204 aaPredicted RBP12.47□□□□□ -0.41
SPIDR-206ENST00000518074 FAM205CA6NFA0 338 aa12.46□□□□□ -0.41
SPIDR-206ENST00000518074 PRR29P0C7W0 189 aa12.46□□□□□ -0.41
SPIDR-206ENST00000518074 SHMT1P34896 483 aa12.46□□□□□ -0.41
SPIDR-206ENST00000518074 HMGCS2P54868 508 aa12.46□□□□□ -0.41
SPIDR-206ENST00000518074 IRF5Q13568 498 aa12.46□□□□□ -0.41
SPIDR-206ENST00000518074 SLC9C1Q4G0N8 1177 aa12.46□□□□□ -0.41
SPIDR-206ENST00000518074 NOSTRINQ8IVI9 506 aa12.46□□□□□ -0.41
SPIDR-206ENST00000518074 ENAHQ8N8S7 591 aaPredicted RBP12.46□□□□□ -0.41
SPIDR-206ENST00000518074 ARHGAP39Q9C0H5 1083 aa12.46□□□□□ -0.41
SPIDR-206ENST00000518074 PLEKHA8P1O95397 391 aa12.46□□□□□ -0.42
SPIDR-206ENST00000518074 CTGFP29279 349 aa12.46□□□□□ -0.42
SPIDR-206ENST00000518074 ABCB5Q2M3G0 1257 aa12.46□□□□□ -0.42
SPIDR-206ENST00000518074 SMCR8Q8TEV9 937 aaPredicted RBP12.46□□□□□ -0.42
SPIDR-206ENST00000518074 KIAA1683Q9H0B3 1180 aa12.46□□□□□ -0.42
SPIDR-206ENST00000518074 ASCC2Q9H1I8 757 aaPredicted RBP12.46□□□□□ -0.42
SPIDR-206ENST00000518074 MCM9Q9NXL9 1143 aa12.46□□□□□ -0.42
SPIDR-206ENST00000518074 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.46□□□□□ -0.42
SPIDR-206ENST00000518074 TPM3P06753 285 aa12.45□□□□□ -0.42
SPIDR-206ENST00000518074 PLCD1P51178 756 aa12.45□□□□□ -0.42
SPIDR-206ENST00000518074 MTMR2Q13614 643 aa12.45□□□□□ -0.42
SPIDR-206ENST00000518074 PTPAQ15257 358 aa12.45□□□□□ -0.42
SPIDR-206ENST00000518074 LONRF3Q496Y0 759 aa12.45□□□□□ -0.42
SPIDR-206ENST00000518074 CTR9Q6PD62 1173 aa12.45□□□□□ -0.42
SPIDR-206ENST00000518074 CCDC84Q86UT8 332 aaPredicted RBP12.45□□□□□ -0.42
SPIDR-206ENST00000518074 AMOTL1Q8IY63 956 aa12.45□□□□□ -0.42
SPIDR-206ENST00000518074 ZSCAN10Q96SZ4 725 aaPredicted RBP12.45□□□□□ -0.42
SPIDR-206ENST00000518074 PCDHB6Q9Y5E3 794 aa12.45□□□□□ -0.42
SPIDR-206ENST00000518074 ZSWIM8A7E2V4 1837 aa12.45□□□□□ -0.42
SPIDR-206ENST00000518074 GH2P01242 217 aa12.45□□□□□ -0.42
SPIDR-206ENST00000518074 MMP1P03956 469 aa12.45□□□□□ -0.42
SPIDR-206ENST00000518074 GRAMD1CQ8IYS0 662 aa12.45□□□□□ -0.42
SPIDR-206ENST00000518074 SLAIN1Q8ND83 568 aa12.45□□□□□ -0.42
SPIDR-206ENST00000518074 CNNM3Q8NE01 707 aa12.45□□□□□ -0.42
SPIDR-206ENST00000518074 WASF1Q92558 559 aa12.45□□□□□ -0.42
SPIDR-206ENST00000518074 CCDC17Q96LX7 622 aa12.45□□□□□ -0.42
SPIDR-206ENST00000518074 MAP3K14Q99558 947 aa12.45□□□□□ -0.42
SPIDR-206ENST00000518074 MYPNQ86TC9 1320 aa12.45□□□□□ -0.42
SPIDR-206ENST00000518074 CCDC196A0A1B0GTZ2 297 aa12.44□□□□□ -0.42
SPIDR-206ENST00000518074 GDF11O95390 407 aa12.44□□□□□ -0.42
SPIDR-206ENST00000518074 CAVIN2O95810 425 aa12.44□□□□□ -0.42
SPIDR-206ENST00000518074 U2AF2P26368 475 aaKnown RBP eCLIP12.44□□□□□ -0.42
SPIDR-206ENST00000518074 TOB1P50616 345 aaPredicted RBP12.44□□□□□ -0.42
SPIDR-206ENST00000518074 SBK1Q52WX2 424 aa12.44□□□□□ -0.42
SPIDR-206ENST00000518074 CATIPQ7Z7H3 387 aa12.44□□□□□ -0.42
SPIDR-206ENST00000518074 IQCA1Q86XH1 822 aa12.44□□□□□ -0.42
SPIDR-206ENST00000518074 PXYLP1Q8TE99 480 aa12.44□□□□□ -0.42
SPIDR-206ENST00000518074 TMEM106CQ9BVX2 250 aa12.44□□□□□ -0.42
SPIDR-206ENST00000518074 TRMT1Q9NXH9 659 aaKnown RBP12.44□□□□□ -0.42
SPIDR-206ENST00000518074 IFNKQ9P0W0 207 aa12.44□□□□□ -0.42
SPIDR-206ENST00000518074 KCNH3Q9ULD8 1083 aa12.44□□□□□ -0.42
SPIDR-206ENST00000518074 DEXIO95424 95 aa12.44□□□□□ -0.42
SPIDR-206ENST00000518074 C12orf60Q5U649 245 aa12.44□□□□□ -0.42
SPIDR-206ENST00000518074 EMILIN3Q9NT22 766 aa12.44□□□□□ -0.42
SPIDR-206ENST00000518074 BAZ2BQ9UIF8 2168 aaKnown RBP12.43□□□□□ -0.42
SPIDR-206ENST00000518074 TPD52L1Q16890 204 aaPredicted RBP12.43□□□□□ -0.42
SPIDR-206ENST00000518074 LBX2Q6XYB7 198 aa12.43□□□□□ -0.42
SPIDR-206ENST00000518074 RAET1EQ8TD07 263 aa12.43□□□□□ -0.42
SPIDR-206ENST00000518074 COA7Q96BR5 231 aa12.43□□□□□ -0.42
SPIDR-206ENST00000518074 USP17L15C9J2P7 530 aa12.43□□□□□ -0.42
SPIDR-206ENST00000518074 USP17L13C9JLJ4 530 aa12.43□□□□□ -0.42
SPIDR-206ENST00000518074 USP17L11C9JVI0 530 aa12.43□□□□□ -0.42
SPIDR-206ENST00000518074 USP17L18D6R9N7 530 aa12.43□□□□□ -0.42
SPIDR-206ENST00000518074 USP17L22D6RA61 530 aa12.43□□□□□ -0.42
SPIDR-206ENST00000518074 USP17L17D6RBQ6 530 aa12.43□□□□□ -0.42
SPIDR-206ENST00000518074 USP17L19D6RCP7 530 aa12.43□□□□□ -0.42
SPIDR-206ENST00000518074 USP17L20D6RJB6 530 aa12.43□□□□□ -0.42
SPIDR-206ENST00000518074 POLR2DO15514 142 aaKnown RBP12.43□□□□□ -0.42
SPIDR-206ENST00000518074 USP17L24Q0WX57 530 aa12.43□□□□□ -0.42
SPIDR-206ENST00000518074 TMEM179Q6ZVK1 233 aa12.43□□□□□ -0.42
SPIDR-206ENST00000518074 USP49Q70CQ1 688 aa12.43□□□□□ -0.42
SPIDR-206ENST00000518074 KRI1Q8N9T8 703 aaKnown RBP12.43□□□□□ -0.42
SPIDR-206ENST00000518074 ARPP21Q9UBL0 812 aaPredicted RBP12.43□□□□□ -0.42
SPIDR-206ENST00000518074 TSPY2A6NKD2 308 aa12.43□□□□□ -0.42
SPIDR-206ENST00000518074 RAD21O60216 631 aa12.43□□□□□ -0.42
SPIDR-206ENST00000518074 ATP1A3P13637 1013 aa12.43□□□□□ -0.42
SPIDR-206ENST00000518074 NLRP12P59046 1061 aa12.43□□□□□ -0.42
SPIDR-206ENST00000518074 SEC23AQ15436 765 aa12.43□□□□□ -0.42
SPIDR-206ENST00000518074 C16orf86Q6ZW13 317 aa12.43□□□□□ -0.42
SPIDR-206ENST00000518074 OTUD6BQ8N6M0 293 aa12.43□□□□□ -0.42
SPIDR-206ENST00000518074 DYNLL2Q96FJ2 89 aa12.43□□□□□ -0.42
SPIDR-206ENST00000518074 GTPBP4Q9BZE4 634 aaKnown RBP12.43□□□□□ -0.42
SPIDR-206ENST00000518074 XPO4Q9C0E2 1151 aaKnown RBP12.43□□□□□ -0.42
SPIDR-206ENST00000518074 SPTLC3Q9NUV7 552 aa12.43□□□□□ -0.42
SPIDR-206ENST00000518074 MYH8P13535 1937 aa12.42□□□□□ -0.42
SPIDR-206ENST00000518074 SKILP12757 684 aa12.42□□□□□ -0.42
SPIDR-206ENST00000518074 GRK4P32298 578 aa12.42□□□□□ -0.42
SPIDR-206ENST00000518074 EARS2Q5JPH6 523 aaKnown RBP12.42□□□□□ -0.42
SPIDR-206ENST00000518074 TMC6Q7Z403 805 aa12.42□□□□□ -0.42
SPIDR-206ENST00000518074 ANKRD13CQ8N6S4 541 aa12.42□□□□□ -0.42
SPIDR-206ENST00000518074 TNPO2O14787 897 aaKnown RBP12.42□□□□□ -0.42
SPIDR-206ENST00000518074 PPP6R2O75170 966 aa12.42□□□□□ -0.42
SPIDR-206ENST00000518074 ZSCAN20P17040 1043 aaPredicted RBP12.42□□□□□ -0.42
SPIDR-206ENST00000518074 UBXN2AP68543 259 aa12.42□□□□□ -0.42
SPIDR-206ENST00000518074 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.42□□□□□ -0.42
SPIDR-206ENST00000518074 EXOC8Q8IYI6 725 aa12.42□□□□□ -0.42
SPIDR-206ENST00000518074 BANK1Q8NDB2 785 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms