RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 TINF2Q9BSI4 451 aa16.88■□□□□ 0.29
SCARNA21-201ENST00000517026 SEC63Q9UGP8 760 aaKnown RBP16.88■□□□□ 0.29
SCARNA21-201ENST00000517026 TPCN1Q9ULQ1 816 aa16.88■□□□□ 0.29
SCARNA21-201ENST00000517026 V9GY48 417 aaPredicted RBP16.88■□□□□ 0.29
SCARNA21-201ENST00000517026 ASTN1O14525 1302 aa16.88■□□□□ 0.29
SCARNA21-201ENST00000517026 CNTNAP5Q8WYK1 1306 aa16.88■□□□□ 0.29
SCARNA21-201ENST00000517026 TRIOBPQ9H2D6 2365 aa16.87■□□□□ 0.29
SCARNA21-201ENST00000517026 CCDC196A0A1B0GTZ2 297 aa16.87■□□□□ 0.29
SCARNA21-201ENST00000517026 EN2P19622 333 aaPredicted RBP16.87■□□□□ 0.29
SCARNA21-201ENST00000517026 CCND3P30281 292 aaPredicted RBP16.87■□□□□ 0.29
SCARNA21-201ENST00000517026 RGS22Q8NE09 1264 aa16.87■□□□□ 0.29
SCARNA21-201ENST00000517026 ZNF274Q96GC6 653 aaPredicted RBP16.87■□□□□ 0.29
SCARNA21-201ENST00000517026 TMEM106CQ9BVX2 250 aa16.87■□□□□ 0.29
SCARNA21-201ENST00000517026 UPF2Q9HAU5 1272 aaKnown RBP16.87■□□□□ 0.29
SCARNA21-201ENST00000517026 PPP2R5BQ15173 497 aa16.86■□□□□ 0.29
SCARNA21-201ENST00000517026 SYTL5Q8TDW5 730 aaPredicted RBP16.86■□□□□ 0.29
SCARNA21-201ENST00000517026 GPKOWQ92917 476 aaPredicted RBP eCLIP16.86■□□□□ 0.29
SCARNA21-201ENST00000517026 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.86■□□□□ 0.29
SCARNA21-201ENST00000517026 HMX1Q9NP08 348 aaPredicted RBP16.86■□□□□ 0.29
SCARNA21-201ENST00000517026 COL20A1Q9P218 1284 aa16.86■□□□□ 0.29
SCARNA21-201ENST00000517026 BAZ2BQ9UIF8 2168 aaKnown RBP16.86■□□□□ 0.29
SCARNA21-201ENST00000517026 RPTORQ8N122 1335 aa16.86■□□□□ 0.29
SCARNA21-201ENST00000517026 NID2Q14112 1375 aa16.86■□□□□ 0.29
SCARNA21-201ENST00000517026 SMCHD1A6NHR9 2005 aa16.86■□□□□ 0.29
SCARNA21-201ENST00000517026 A0A0C4DFX4 3053 aa16.85■□□□□ 0.29
SCARNA21-201ENST00000517026 ZNF236Q9UL36 1845 aa16.85■□□□□ 0.29
SCARNA21-201ENST00000517026 SNAI1O95863 264 aaPredicted RBP16.85■□□□□ 0.29
SCARNA21-201ENST00000517026 CFBP00751 764 aa16.85■□□□□ 0.29
SCARNA21-201ENST00000517026 HOXA13P31271 388 aaPredicted RBP16.85■□□□□ 0.29
SCARNA21-201ENST00000517026 ANKRD1Q15327 319 aa16.85■□□□□ 0.29
SCARNA21-201ENST00000517026 NTRK3Q16288 839 aa16.85■□□□□ 0.29
SCARNA21-201ENST00000517026 MAMDC4Q6UXC1 1216 aa16.85■□□□□ 0.29
SCARNA21-201ENST00000517026 HEATR3Q7Z4Q2 680 aa16.85■□□□□ 0.29
SCARNA21-201ENST00000517026 ZNF467Q7Z7K2 595 aaPredicted RBP16.85■□□□□ 0.29
SCARNA21-201ENST00000517026 MCF2L2Q86YR7 1114 aa16.85■□□□□ 0.29
SCARNA21-201ENST00000517026 PHKBQ93100 1093 aa16.85■□□□□ 0.29
SCARNA21-201ENST00000517026 DEFB118Q96PH6 123 aa16.85■□□□□ 0.29
SCARNA21-201ENST00000517026 PAK6Q9NQU5 681 aaPredicted RBP16.85■□□□□ 0.29
SCARNA21-201ENST00000517026 DTNBO60941 627 aa16.84■□□□□ 0.29
SCARNA21-201ENST00000517026 LARGE1O95461 756 aa16.84■□□□□ 0.29
SCARNA21-201ENST00000517026 GJB1P08034 283 aa16.84■□□□□ 0.29
SCARNA21-201ENST00000517026 CYBAP13498 195 aa16.84■□□□□ 0.29
SCARNA21-201ENST00000517026 CNGA1P29973 690 aa16.84■□□□□ 0.29
SCARNA21-201ENST00000517026 TRAF1Q13077 416 aa16.84■□□□□ 0.29
SCARNA21-201ENST00000517026 WWC2Q6AWC2 1192 aa16.84■□□□□ 0.29
SCARNA21-201ENST00000517026 ARMCX2Q7L311 632 aa16.84■□□□□ 0.29
SCARNA21-201ENST00000517026 NECAB1Q8N987 351 aa16.84■□□□□ 0.29
SCARNA21-201ENST00000517026 TBC1D32Q96NH3 1257 aa16.84■□□□□ 0.29
SCARNA21-201ENST00000517026 TAAR1Q96RJ0 339 aa16.84■□□□□ 0.29
SCARNA21-201ENST00000517026 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.84■□□□□ 0.29
SCARNA21-201ENST00000517026 ASB14A6NK59 587 aa16.83■□□□□ 0.28
SCARNA21-201ENST00000517026 GCOM1H8Y6P7 765 aaPredicted RBP16.83■□□□□ 0.28
SCARNA21-201ENST00000517026 PFKFB2O60825 505 aa16.83■□□□□ 0.28
SCARNA21-201ENST00000517026 POLR2MP0CAP2 368 aa16.83■□□□□ 0.28
SCARNA21-201ENST00000517026 ALDH5A1P51649 535 aaPredicted RBP16.83■□□□□ 0.28
SCARNA21-201ENST00000517026 HSD17B4P51659 736 aa16.83■□□□□ 0.28
SCARNA21-201ENST00000517026 SCRN1Q12765 414 aa16.83■□□□□ 0.28
SCARNA21-201ENST00000517026 ME3Q16798 604 aa16.83■□□□□ 0.28
SCARNA21-201ENST00000517026 TYW1BQ6NUM6 668 aa16.83■□□□□ 0.28
SCARNA21-201ENST00000517026 MSL3Q8N5Y2 521 aaKnown RBP16.83■□□□□ 0.28
SCARNA21-201ENST00000517026 SYNGAP1Q96PV0 1343 aa16.83■□□□□ 0.28
SCARNA21-201ENST00000517026 SLC26A6Q9BXS9 759 aa16.83■□□□□ 0.28
SCARNA21-201ENST00000517026 SLKQ9H2G2 1235 aaPredicted RBP16.83■□□□□ 0.28
SCARNA21-201ENST00000517026 CNPY2Q9Y2B0 182 aa16.83■□□□□ 0.28
SCARNA21-201ENST00000517026 PRPF3O43395 683 aaKnown RBP16.82■□□□□ 0.28
SCARNA21-201ENST00000517026 ZNF865P0CJ78 1059 aaPredicted RBP16.82■□□□□ 0.28
SCARNA21-201ENST00000517026 IFNAR1P17181 557 aa16.82■□□□□ 0.28
SCARNA21-201ENST00000517026 GHRHRQ02643 423 aa16.82■□□□□ 0.28
SCARNA21-201ENST00000517026 PKN1Q16512 942 aa16.82■□□□□ 0.28
SCARNA21-201ENST00000517026 ANO1Q5XXA6 986 aa16.82■□□□□ 0.28
SCARNA21-201ENST00000517026 FCHSD1Q86WN1 690 aa16.82■□□□□ 0.28
SCARNA21-201ENST00000517026 U2AF1L4Q8WU68 220 aaKnown RBP16.82■□□□□ 0.28
SCARNA21-201ENST00000517026 ADD3Q9UEY8 706 aaKnown RBP16.82■□□□□ 0.28
SCARNA21-201ENST00000517026 ZHX1Q9UKY1 873 aaPredicted RBP16.82■□□□□ 0.28
SCARNA21-201ENST00000517026 STXBP3O00186 592 aa16.81■□□□□ 0.28
SCARNA21-201ENST00000517026 CPLX1O14810 134 aa16.81■□□□□ 0.28
SCARNA21-201ENST00000517026 SGPL1O95470 568 aa16.81■□□□□ 0.28
SCARNA21-201ENST00000517026 GJA8P48165 433 aa16.81■□□□□ 0.28
SCARNA21-201ENST00000517026 ACVR2BQ13705 512 aa16.81■□□□□ 0.28
SCARNA21-201ENST00000517026 PFKFB3Q16875 520 aaPredicted RBP16.81■□□□□ 0.28
SCARNA21-201ENST00000517026 LHX8Q68G74 356 aa16.81■□□□□ 0.28
SCARNA21-201ENST00000517026 USP17L6PQ6QN14 398 aa16.81■□□□□ 0.28
SCARNA21-201ENST00000517026 EEPD1Q7L9B9 569 aa16.81■□□□□ 0.28
SCARNA21-201ENST00000517026 SHISA4Q96DD7 197 aa16.81■□□□□ 0.28
SCARNA21-201ENST00000517026 RMDN3Q96TC7 470 aa16.81■□□□□ 0.28
SCARNA21-201ENST00000517026 MAF1Q9H063 256 aa16.81■□□□□ 0.28
SCARNA21-201ENST00000517026 KATNBL1Q9H079 304 aa16.81■□□□□ 0.28
SCARNA21-201ENST00000517026 PSTPIP2Q9H939 334 aa16.81■□□□□ 0.28
SCARNA21-201ENST00000517026 NRBP1Q9UHY1 535 aa16.81■□□□□ 0.28
SCARNA21-201ENST00000517026 COLQQ9Y215 455 aaPredicted RBP16.81■□□□□ 0.28
SCARNA21-201ENST00000517026 SEPT4O43236 478 aa16.8■□□□□ 0.28
SCARNA21-201ENST00000517026 TFRCP02786 760 aaKnown RBP16.8■□□□□ 0.28
SCARNA21-201ENST00000517026 SCG2P13521 617 aa16.8■□□□□ 0.28
SCARNA21-201ENST00000517026 EIF2AK2P19525 551 aaKnown RBP16.8■□□□□ 0.28
SCARNA21-201ENST00000517026 NAPAP54920 295 aa16.8■□□□□ 0.28
SCARNA21-201ENST00000517026 AKAP17AQ02040 695 aaKnown RBP16.8■□□□□ 0.28
SCARNA21-201ENST00000517026 SSRP1Q08945 709 aaKnown RBP16.8■□□□□ 0.28
SCARNA21-201ENST00000517026 RABEP1Q15276 862 aa16.8■□□□□ 0.28
SCARNA21-201ENST00000517026 FBXO16Q8IX29 292 aaPredicted RBP16.8■□□□□ 0.28
SCARNA21-201ENST00000517026 DNERQ8NFT8 737 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms