RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	RASA3	Q14644	834 aa		5.11	□□□□□ -1.59
ATP2C1-223	ENST00000515854	IQCB1	Q15051	598 aa		5.11	□□□□□ -1.59
ATP2C1-223	ENST00000515854	NONO	Q15233	471 aa	Known RBP eCLIP	5.11	□□□□□ -1.59
ATP2C1-223	ENST00000515854	IL17A	Q16552	155 aa		5.11	□□□□□ -1.59
ATP2C1-223	ENST00000515854	LONRF3	Q496Y0	759 aa		5.11	□□□□□ -1.59
ATP2C1-223	ENST00000515854	SPECC1	Q5M775	1068 aa		5.11	□□□□□ -1.59
ATP2C1-223	ENST00000515854	USP49	Q70CQ1	688 aa		5.11	□□□□□ -1.59
ATP2C1-223	ENST00000515854	KCTD1	Q719H9	257 aa		5.11	□□□□□ -1.59
ATP2C1-223	ENST00000515854	RASGRP4	Q8TDF6	673 aa		5.11	□□□□□ -1.59
ATP2C1-223	ENST00000515854	COA7	Q96BR5	231 aa		5.11	□□□□□ -1.59
ATP2C1-223	ENST00000515854	TEPSIN	Q96N21	525 aa		5.11	□□□□□ -1.59
ATP2C1-223	ENST00000515854	DNAJC25	Q9H1X3	360 aa		5.11	□□□□□ -1.59
ATP2C1-223	ENST00000515854	CBX8	Q9HC52	389 aa		5.11	□□□□□ -1.59
ATP2C1-223	ENST00000515854	SPON1	Q9HCB6	807 aa		5.11	□□□□□ -1.59
ATP2C1-223	ENST00000515854	ARHGEF10L	Q9HCE6	1279 aa		5.11	□□□□□ -1.59
ATP2C1-223	ENST00000515854	RIC8A	Q9NPQ8	531 aa		5.11	□□□□□ -1.59
ATP2C1-223	ENST00000515854	GINM1	Q9NU53	330 aa		5.11	□□□□□ -1.59
ATP2C1-223	ENST00000515854	ANO10	Q9NW15	660 aa		5.11	□□□□□ -1.59
ATP2C1-223	ENST00000515854	CNOT7	Q9UIV1	285 aa	Known RBP	5.11	□□□□□ -1.59
ATP2C1-223	ENST00000515854	ZBTB21	Q9ULJ3	1066 aa		5.11	□□□□□ -1.59
ATP2C1-223	ENST00000515854	TMX2	Q9Y320	296 aa		5.11	□□□□□ -1.59
ATP2C1-223	ENST00000515854	MYH6	P13533	1939 aa		5.11	□□□□□ -1.59
ATP2C1-223	ENST00000515854	VWA3A	A6NCI4	1184 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	TRIM66	O15016	1216 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	POLR2D	O15514	142 aa	Known RBP	5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	AP5Z1	O43299	807 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	ACTN4	O43707	911 aa	Known RBP	5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	EDIL3	O43854	480 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	PLA2G6	O60733	806 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	MCM7	P33993	719 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	LONP1	P36776	959 aa	Known RBP	5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	ECE1	P42892	770 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	SARS	P49591	514 aa	Known RBP	5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	MRPL12	P52815	198 aa	Known RBP	5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	TNFAIP1	Q13829	316 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	CDC37	Q16543	378 aa	Predicted RBP	5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	INF2	Q27J81	1249 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	QRICH1	Q2TAL8	776 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	KIF4B	Q2VIQ3	1234 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	HS1BP3	Q53T59	392 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	KIAA1755	Q5JYT7	1200 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	NT5DC1	Q5TFE4	455 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	SYDE2	Q5VT97	1194 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	KANK3	Q6NY19	840 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	C11orf57	Q6ZUT1	292 aa	Predicted RBP	5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	MIGA2	Q7L4E1	593 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	SAMD7	Q7Z3H4	446 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	SH3RF1	Q7Z6J0	888 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	NEK8	Q86SG6	692 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	REXO1	Q8N1G1	1221 aa	Known RBP	5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	CNNM3	Q8NE01	707 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	ACER1	Q8TDN7	264 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	TBCK	Q8TEA7	893 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	SYMPK	Q92797	1274 aa	Known RBP	5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	ERCC4	Q92889	916 aa	Predicted RBP	5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	EPSTI1	Q96J88	318 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	BPIFA3	Q9BQP9	254 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	PYM1	Q9BRP8	204 aa	Known RBP	5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	ZNF541	Q9H0D2	1346 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	GLT8D2	Q9H1C3	349 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	TMEM60	Q9H2L4	133 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	SH2D4A	Q9H788	454 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	VCPKMT	Q9H867	229 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	TMEM260	Q9NX78	707 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	BIN2	Q9UBW5	565 aa	Predicted RBP	5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	USP25	Q9UHP3	1055 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	SERTAD1	Q9UHV2	236 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	HACL1	Q9UJ83	578 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	HOOK1	Q9UJC3	728 aa	Known RBP	5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	ARFGEF1	Q9Y6D6	1849 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	GJA3	Q9Y6H8	435 aa		5.1	□□□□□ -1.59
ATP2C1-223	ENST00000515854	MYH8	P13535	1937 aa		5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854		A0A087X0B3	334 aa		5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854	TMEM232	C9JQI7	657 aa		5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854		H7C1D1	291 aa		5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854	FOXN1	O15353	648 aa		5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854	RAD21	O60216	631 aa		5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854	CTNND1	O60716	968 aa	Known RBP	5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854	ADCY5	O95622	1261 aa		5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854	ASNS	P08243	561 aa		5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854	SLFN14	P0C7P3	912 aa		5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854	LMNB1	P20700	586 aa		5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854	NFX1	Q12986	1120 aa	Known RBP	5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854	TRAF1	Q13077	416 aa		5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854	PNOC	Q13519	176 aa		5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854	POSTN	Q15063	836 aa		5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854	LETM2	Q2VYF4	491 aa		5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854	DPCR1	Q3MIW9	517 aa		5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854	JAKMIP3	Q5VZ66	844 aa		5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854	MCTP2	Q6DN12	878 aa		5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854	PPP4R3A	Q6IN85	833 aa		5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854	DTHD1	Q6ZMT9	781 aa		5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854	ARHGAP27	Q6ZUM4	889 aa		5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854	LUZP1	Q86V48	1076 aa		5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854	FBXO11	Q86XK2	927 aa		5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854	TEX2	Q8IWB9	1127 aa		5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854	DHX40	Q8IX18	779 aa	Known RBP	5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854	CEP57L1	Q8IYX8	460 aa		5.09	□□□□□ -1.59
ATP2C1-223	ENST00000515854	GPC2	Q8N158	579 aa		5.09	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms