RNA–Protein interactions for RNA: ENST00000515802.5

SH3BP2-229, Transcript of SH3 domain binding protein 2, humanhuman

TSL 2

Gene SH3BP2, Length 2,247 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-229ENST00000515802 VPS33BQ9H267 617 aa16.98■□□□□ 0.31
SH3BP2-229ENST00000515802 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.98■□□□□ 0.31
SH3BP2-229ENST00000515802 CTNND2Q9UQB3 1225 aa16.98■□□□□ 0.31
SH3BP2-229ENST00000515802 TXKP42681 527 aa16.98■□□□□ 0.31
SH3BP2-229ENST00000515802 MRPL12P52815 198 aaKnown RBP16.98■□□□□ 0.31
SH3BP2-229ENST00000515802 CDAN1Q8IWY9 1227 aa16.98■□□□□ 0.31
SH3BP2-229ENST00000515802 FAM151AQ8WW52 585 aa16.98■□□□□ 0.31
SH3BP2-229ENST00000515802 ATF5Q9Y2D1 282 aaPredicted RBP16.98■□□□□ 0.31
SH3BP2-229ENST00000515802 PCDHA1Q9Y5I3 950 aa16.98■□□□□ 0.31
SH3BP2-229ENST00000515802 SMCHD1A6NHR9 2005 aa16.98■□□□□ 0.31
SH3BP2-229ENST00000515802 CDK11BP21127 795 aaKnown RBP16.97■□□□□ 0.31
SH3BP2-229ENST00000515802 SFPQP23246 707 aaKnown RBP eCLIP16.97■□□□□ 0.31
SH3BP2-229ENST00000515802 ZNF658Q5TYW1 1059 aaPredicted RBP16.97■□□□□ 0.31
SH3BP2-229ENST00000515802 CDKAL1Q5VV42 579 aa16.97■□□□□ 0.31
SH3BP2-229ENST00000515802 APTXQ7Z2E3 356 aaKnown RBP16.97■□□□□ 0.31
SH3BP2-229ENST00000515802 RMND1Q9NWS8 449 aa16.97■□□□□ 0.31
SH3BP2-229ENST00000515802 GDAQ9Y2T3 454 aa16.97■□□□□ 0.31
SH3BP2-229ENST00000515802 USP17L15C9J2P7 530 aa16.97■□□□□ 0.31
SH3BP2-229ENST00000515802 USP17L13C9JLJ4 530 aa16.97■□□□□ 0.31
SH3BP2-229ENST00000515802 USP17L11C9JVI0 530 aa16.97■□□□□ 0.31
SH3BP2-229ENST00000515802 USP17L18D6R9N7 530 aa16.97■□□□□ 0.31
SH3BP2-229ENST00000515802 USP17L22D6RA61 530 aa16.97■□□□□ 0.31
SH3BP2-229ENST00000515802 USP17L17D6RBQ6 530 aa16.97■□□□□ 0.31
SH3BP2-229ENST00000515802 USP17L19D6RCP7 530 aa16.97■□□□□ 0.31
SH3BP2-229ENST00000515802 USP17L20D6RJB6 530 aa16.97■□□□□ 0.31
SH3BP2-229ENST00000515802 KLRC4O43908 158 aa16.97■□□□□ 0.31
SH3BP2-229ENST00000515802 FXR2P51116 673 aaKnown RBP eCLIP16.97■□□□□ 0.31
SH3BP2-229ENST00000515802 SNAP25P60880 206 aa16.97■□□□□ 0.31
SH3BP2-229ENST00000515802 USP17L24Q0WX57 530 aa16.97■□□□□ 0.31
SH3BP2-229ENST00000515802 PPP4R3AQ6IN85 833 aa16.97■□□□□ 0.31
SH3BP2-229ENST00000515802 USP17L6PQ6QN14 398 aa16.97■□□□□ 0.31
SH3BP2-229ENST00000515802 PIM2Q9P1W9 311 aa16.97■□□□□ 0.31
SH3BP2-229ENST00000515802 USP27XA6NNY8 438 aa16.96■□□□□ 0.31
SH3BP2-229ENST00000515802 COBLO75128 1261 aa16.96■□□□□ 0.31
SH3BP2-229ENST00000515802 CXCL9Q07325 125 aa16.96■□□□□ 0.31
SH3BP2-229ENST00000515802 AGBL3Q8NEM8 1001 aa16.96■□□□□ 0.31
SH3BP2-229ENST00000515802 CUEDC2Q9H467 287 aa16.96■□□□□ 0.31
SH3BP2-229ENST00000515802 VEZTQ9HBM0 779 aa16.96■□□□□ 0.31
SH3BP2-229ENST00000515802 MYL1P05976 194 aa16.96■□□□□ 0.3
SH3BP2-229ENST00000515802 ECE1P42892 770 aa16.96■□□□□ 0.3
SH3BP2-229ENST00000515802 MTMR14Q8NCE2 650 aa16.96■□□□□ 0.3
SH3BP2-229ENST00000515802 GTPBP4Q9BZE4 634 aaKnown RBP16.96■□□□□ 0.3
SH3BP2-229ENST00000515802 TMEM39BQ9GZU3 492 aa16.96■□□□□ 0.3
SH3BP2-229ENST00000515802 MAGEF1Q9HAY2 307 aa16.96■□□□□ 0.3
SH3BP2-229ENST00000515802 A0A1B0GTH6 734 aa16.95■□□□□ 0.3
SH3BP2-229ENST00000515802 BMP3P12645 472 aa16.95■□□□□ 0.3
SH3BP2-229ENST00000515802 TGFB2P61812 414 aa16.95■□□□□ 0.3
SH3BP2-229ENST00000515802 KCNB1Q14721 858 aa16.95■□□□□ 0.3
SH3BP2-229ENST00000515802 KMT5BQ4FZB7 885 aa16.95■□□□□ 0.3
SH3BP2-229ENST00000515802 TAF3Q5VWG9 929 aa16.95■□□□□ 0.3
SH3BP2-229ENST00000515802 SPICE1Q8N0Z3 855 aa16.95■□□□□ 0.3
SH3BP2-229ENST00000515802 C16orf45Q96MC5 204 aaPredicted RBP16.95■□□□□ 0.3
SH3BP2-229ENST00000515802 RWDD2AQ9UIY3 292 aa16.95■□□□□ 0.3
SH3BP2-229ENST00000515802 POTEMA6NI47 508 aa16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 PRCPP42785 496 aa16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 PAK1Q13153 545 aa16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 KIAA1755Q5JYT7 1200 aa16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 SYDE2Q5VT97 1194 aa16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 FKBP1CQ5VVH2 108 aa16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 ACER1Q8TDN7 264 aa16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 HAS1Q92839 578 aa16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 ZBED3Q96IU2 234 aaPredicted RBP16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 LRWD1Q9UFC0 647 aa16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 DDX25Q9UHL0 483 aaKnown RBP16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 MAPK8IP1Q9UQF2 711 aa16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 SHTN1A0MZ66 631 aa16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 MEIS2O14770 477 aa16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 TAL1P17542 331 aaPredicted RBP16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 GOLGA8FQ08AF8 430 aa16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 GOLGA8DPQ0D2H9 430 aa16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 TBX2Q13207 712 aaPredicted RBP16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 GRB10Q13322 594 aa16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 DHX8Q14562 1220 aaKnown RBP16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 NR1I3Q14994 352 aa16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 BTNL9Q6UXG8 535 aa16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 FBXO41Q8TF61 875 aa16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 NELFBQ8WX92 580 aa16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 P2RX7Q99572 595 aaKnown RBP16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 TRIM9Q9C026 710 aa16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 GLT8D2Q9H1C3 349 aa16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 ZBTB21Q9ULJ3 1066 aa16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 SYNPO2Q9UMS6 1093 aa16.94■□□□□ 0.3
SH3BP2-229ENST00000515802 RHOBTB3O94955 611 aa16.93■□□□□ 0.3
SH3BP2-229ENST00000515802 IKQ13123 557 aaPredicted RBP16.93■□□□□ 0.3
SH3BP2-229ENST00000515802 TMEM266Q2M3C6 531 aa16.93■□□□□ 0.3
SH3BP2-229ENST00000515802 DALRD3Q5D0E6 543 aaKnown RBP16.93■□□□□ 0.3
SH3BP2-229ENST00000515802 GJA10Q969M2 543 aa16.93■□□□□ 0.3
SH3BP2-229ENST00000515802 AMNQ9BXJ7 453 aa16.93■□□□□ 0.3
SH3BP2-229ENST00000515802 ATAD5Q96QE3 1844 aa16.93■□□□□ 0.3
SH3BP2-229ENST00000515802 NBPF9Q3BBW0 867 aa16.93■□□□□ 0.3
SH3BP2-229ENST00000515802 USH1GQ495M9 461 aa16.93■□□□□ 0.3
SH3BP2-229ENST00000515802 SPECC1LQ69YQ0 1117 aa16.93■□□□□ 0.3
SH3BP2-229ENST00000515802 ADSSL1Q8N142 457 aa16.93■□□□□ 0.3
SH3BP2-229ENST00000515802 CCAR2Q8N163 923 aaKnown RBP16.93■□□□□ 0.3
SH3BP2-229ENST00000515802 PNMA5Q96PV4 448 aa16.93■□□□□ 0.3
SH3BP2-229ENST00000515802 ANO3Q9BYT9 981 aa16.93■□□□□ 0.3
SH3BP2-229ENST00000515802 TAOK3Q9H2K8 898 aa16.93■□□□□ 0.3
SH3BP2-229ENST00000515802 KCND1Q9NSA2 647 aa16.93■□□□□ 0.3
SH3BP2-229ENST00000515802 BLOC1S4Q9NUP1 217 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms