RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 A0A1W2PQ45 241 aaPredicted RBP17.26■□□□□ 0.35
HMGCLL1-209ENST00000515546 A0A1W2PQY0 241 aa17.26■□□□□ 0.35
HMGCLL1-209ENST00000515546 MOXD2PA6NHM9 499 aa17.26■□□□□ 0.35
HMGCLL1-209ENST00000515546 DHX16O60231 1041 aaKnown RBP17.26■□□□□ 0.35
HMGCLL1-209ENST00000515546 DDAH1O94760 285 aa17.26■□□□□ 0.35
HMGCLL1-209ENST00000515546 SLC34A2O95436 690 aa17.26■□□□□ 0.35
HMGCLL1-209ENST00000515546 ACLYP53396 1101 aa17.26■□□□□ 0.35
HMGCLL1-209ENST00000515546 CATIPQ7Z7H3 387 aa17.26■□□□□ 0.35
HMGCLL1-209ENST00000515546 DNERQ8NFT8 737 aa17.26■□□□□ 0.35
HMGCLL1-209ENST00000515546 TMEM87BQ96K49 555 aa17.26■□□□□ 0.35
HMGCLL1-209ENST00000515546 AMNQ9BXJ7 453 aa17.26■□□□□ 0.35
HMGCLL1-209ENST00000515546 RIOX1Q9H6W3 641 aa17.26■□□□□ 0.35
HMGCLL1-209ENST00000515546 GPHNQ9NQX3 736 aaPredicted RBP17.26■□□□□ 0.35
HMGCLL1-209ENST00000515546 GNEQ9Y223 722 aaKnown RBP17.26■□□□□ 0.35
HMGCLL1-209ENST00000515546 A0A1W2PPC1 479 aa17.25■□□□□ 0.35
HMGCLL1-209ENST00000515546 RBM47A0AV96 593 aaKnown RBP17.25■□□□□ 0.35
HMGCLL1-209ENST00000515546 OPLAHO14841 1288 aa17.25■□□□□ 0.35
HMGCLL1-209ENST00000515546 ZBTB5O15062 677 aa17.25■□□□□ 0.35
HMGCLL1-209ENST00000515546 CYTH3O43739 400 aa17.25■□□□□ 0.35
HMGCLL1-209ENST00000515546 SYN1P17600 705 aa17.25■□□□□ 0.35
HMGCLL1-209ENST00000515546 TNFAIP2Q03169 654 aa17.25■□□□□ 0.35
HMGCLL1-209ENST00000515546 TRIM60Q495X7 471 aa17.25■□□□□ 0.35
HMGCLL1-209ENST00000515546 RNF20Q5VTR2 975 aa17.25■□□□□ 0.35
HMGCLL1-209ENST00000515546 POTEDQ86YR6 584 aa17.25■□□□□ 0.35
HMGCLL1-209ENST00000515546 ZNF654Q8IZM8 581 aa17.25■□□□□ 0.35
HMGCLL1-209ENST00000515546 FERMT2Q96AC1 680 aa17.25■□□□□ 0.35
HMGCLL1-209ENST00000515546 VAT1LQ9HCJ6 419 aa17.25■□□□□ 0.35
HMGCLL1-209ENST00000515546 MRPL11Q9Y3B7 192 aaKnown RBP17.25■□□□□ 0.35
HMGCLL1-209ENST00000515546 LTBP2Q14767 1821 aa17.24■□□□□ 0.35
HMGCLL1-209ENST00000515546 C6orf222P0C671 652 aaPredicted RBP17.24■□□□□ 0.35
HMGCLL1-209ENST00000515546 SMPD1P17405 629 aa17.24■□□□□ 0.35
HMGCLL1-209ENST00000515546 BMP8BP34820 402 aa17.24■□□□□ 0.35
HMGCLL1-209ENST00000515546 LIFRP42702 1097 aa17.24■□□□□ 0.35
HMGCLL1-209ENST00000515546 MAGEA10P43363 369 aaPredicted RBP17.24■□□□□ 0.35
HMGCLL1-209ENST00000515546 IRX5P78411 483 aaPredicted RBP17.24■□□□□ 0.35
HMGCLL1-209ENST00000515546 KCNA10Q16322 511 aa17.24■□□□□ 0.35
HMGCLL1-209ENST00000515546 TSGA10IPQ3SY00 556 aa17.24■□□□□ 0.35
HMGCLL1-209ENST00000515546 IQSEC1Q6DN90 963 aa17.24■□□□□ 0.35
HMGCLL1-209ENST00000515546 MCF2L2Q86YR7 1114 aa17.24■□□□□ 0.35
HMGCLL1-209ENST00000515546 SYTL5Q8TDW5 730 aaPredicted RBP17.24■□□□□ 0.35
HMGCLL1-209ENST00000515546 SPC25Q9HBM1 224 aa17.24■□□□□ 0.35
HMGCLL1-209ENST00000515546 PDGFCQ9NRA1 345 aa17.24■□□□□ 0.35
HMGCLL1-209ENST00000515546 COL20A1Q9P218 1284 aa17.24■□□□□ 0.35
HMGCLL1-209ENST00000515546 ATP11BQ9Y2G3 1177 aa17.24■□□□□ 0.35
HMGCLL1-209ENST00000515546 FXR1P51114 621 aaKnown RBP eCLIP17.23■□□□□ 0.35
HMGCLL1-209ENST00000515546 HSD17B4P51659 736 aa17.23■□□□□ 0.35
HMGCLL1-209ENST00000515546 EEPD1Q7L9B9 569 aa17.23■□□□□ 0.35
HMGCLL1-209ENST00000515546 TLK2Q86UE8 772 aa17.23■□□□□ 0.35
HMGCLL1-209ENST00000515546 TMTC2Q8N394 836 aa17.23■□□□□ 0.35
HMGCLL1-209ENST00000515546 PCSK9Q8NBP7 692 aaKnown RBP17.23■□□□□ 0.35
HMGCLL1-209ENST00000515546 TBC1D5Q92609 795 aa17.23■□□□□ 0.35
HMGCLL1-209ENST00000515546 MPHOSPH6Q99547 160 aaKnown RBP17.23■□□□□ 0.35
HMGCLL1-209ENST00000515546 Q9Y3F1 56 aa17.23■□□□□ 0.35
HMGCLL1-209ENST00000515546 MYH6P13533 1939 aa17.23■□□□□ 0.35
HMGCLL1-209ENST00000515546 DUSP28Q4G0W2 176 aa17.22■□□□□ 0.35
HMGCLL1-209ENST00000515546 TMEM63BQ5T3F8 832 aa17.22■□□□□ 0.35
HMGCLL1-209ENST00000515546 SGMS1Q86VZ5 419 aa17.22■□□□□ 0.35
HMGCLL1-209ENST00000515546 RASEFQ8IZ41 740 aa17.22■□□□□ 0.35
HMGCLL1-209ENST00000515546 NUP133Q8WUM0 1156 aa17.22■□□□□ 0.35
HMGCLL1-209ENST00000515546 KCNB2Q92953 911 aa17.22■□□□□ 0.35
HMGCLL1-209ENST00000515546 PIGSQ96S52 555 aa17.22■□□□□ 0.35
HMGCLL1-209ENST00000515546 MYL10Q9BUA6 226 aa17.22■□□□□ 0.35
HMGCLL1-209ENST00000515546 SPZ1Q9BXG8 430 aa17.22■□□□□ 0.35
HMGCLL1-209ENST00000515546 PDLIM7Q9NR12 457 aa17.22■□□□□ 0.35
HMGCLL1-209ENST00000515546 ELP1O95163 1332 aa17.21■□□□□ 0.35
HMGCLL1-209ENST00000515546 SZT2Q5T011 3432 aa17.21■□□□□ 0.35
HMGCLL1-209ENST00000515546 PNMA6FA0A0J9YX94 578 aa17.21■□□□□ 0.35
HMGCLL1-209ENST00000515546 ASGR1P07306 291 aa17.21■□□□□ 0.35
HMGCLL1-209ENST00000515546 PTGS1P23219 599 aa17.21■□□□□ 0.35
HMGCLL1-209ENST00000515546 SMARCA1P28370 1054 aa17.21■□□□□ 0.35
HMGCLL1-209ENST00000515546 KIF5BP33176 963 aa17.21■□□□□ 0.35
HMGCLL1-209ENST00000515546 TLE2Q04725 743 aa17.21■□□□□ 0.35
HMGCLL1-209ENST00000515546 PDE4DQ08499 809 aa17.21■□□□□ 0.35
HMGCLL1-209ENST00000515546 TRAF1Q13077 416 aa17.21■□□□□ 0.35
HMGCLL1-209ENST00000515546 GNASQ5JWF2 1037 aa17.21■□□□□ 0.35
HMGCLL1-209ENST00000515546 ANKRD33Q7Z3H0 272 aa17.21■□□□□ 0.35
HMGCLL1-209ENST00000515546 HOMER1Q86YM7 354 aa17.21■□□□□ 0.35
HMGCLL1-209ENST00000515546 CTCFLQ8NI51 663 aaPredicted RBP17.21■□□□□ 0.35
HMGCLL1-209ENST00000515546 STARD7Q9NQZ5 370 aa17.21■□□□□ 0.35
HMGCLL1-209ENST00000515546 MAP3K20Q9NYL2 800 aaKnown RBP17.21■□□□□ 0.35
HMGCLL1-209ENST00000515546 PCDH10Q9P2E7 1040 aa17.21■□□□□ 0.35
HMGCLL1-209ENST00000515546 PCDHA1Q9Y5I3 950 aa17.21■□□□□ 0.35
HMGCLL1-209ENST00000515546 CCDC69A6NI79 296 aa17.2■□□□□ 0.34
HMGCLL1-209ENST00000515546 B4DLN1 442 aa17.2■□□□□ 0.34
HMGCLL1-209ENST00000515546 CALM1P0DP23 149 aa17.2■□□□□ 0.34
HMGCLL1-209ENST00000515546 CALM2P0DP24 149 aa17.2■□□□□ 0.34
HMGCLL1-209ENST00000515546 CALM3P0DP25 149 aa17.2■□□□□ 0.34
HMGCLL1-209ENST00000515546 MRPL12P52815 198 aaKnown RBP17.2■□□□□ 0.34
HMGCLL1-209ENST00000515546 EXOSC10Q01780 885 aaKnown RBP17.2■□□□□ 0.34
HMGCLL1-209ENST00000515546 KRT32Q14532 448 aa17.2■□□□□ 0.34
HMGCLL1-209ENST00000515546 FSCN1Q16658 493 aaKnown RBP17.2■□□□□ 0.34
HMGCLL1-209ENST00000515546 SAMD3Q8N6K7 520 aa17.2■□□□□ 0.34
HMGCLL1-209ENST00000515546 NSUN6Q8TEA1 469 aaKnown RBP17.2■□□□□ 0.34
HMGCLL1-209ENST00000515546 GLT1D1Q96MS3 346 aa17.2■□□□□ 0.34
HMGCLL1-209ENST00000515546 NEK1Q96PY6 1258 aa17.2■□□□□ 0.34
HMGCLL1-209ENST00000515546 TAAR1Q96RJ0 339 aa17.2■□□□□ 0.34
HMGCLL1-209ENST00000515546 IWS1Q96ST2 819 aa17.2■□□□□ 0.34
HMGCLL1-209ENST00000515546 LZTS2Q9BRK4 669 aa17.2■□□□□ 0.34
HMGCLL1-209ENST00000515546 WDR11Q9BZH6 1224 aa17.2■□□□□ 0.34
HMGCLL1-209ENST00000515546 AP5M1Q9H0R1 490 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms