RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 CHRNDQ07001 517 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 COG1Q8WTW3 980 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 SEC31BQ9NQW1 1179 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 INTS9Q9NV88 658 aaKnown RBP8.52□□□□□ -1.05
CLCN3-209ENST00000513761 ARPP21Q9UBL0 812 aaPredicted RBP8.52□□□□□ -1.05
CLCN3-209ENST00000513761 CD2APQ9Y5K6 639 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 SEMA3EO15041 775 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 GNA14O95837 355 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 CCNE1P24864 410 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 FXR1P51114 621 aaKnown RBP eCLIP8.52□□□□□ -1.05
CLCN3-209ENST00000513761 DHX9Q08211 1270 aaKnown RBP8.52□□□□□ -1.05
CLCN3-209ENST00000513761 ADCY1Q08828 1119 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 ST3GAL1Q11201 340 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 NEDD9Q14511 834 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 MAN2A1Q16706 1144 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 PPP4R3AQ6IN85 833 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 HIBCHQ6NVY1 386 aaPredicted RBP8.52□□□□□ -1.05
CLCN3-209ENST00000513761 EMBQ6PCB8 327 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 CEP63Q96MT8 703 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 MMS19Q96T76 1030 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 PCDHA4Q9UN74 947 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 EXOC3O60645 756 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 KRT15P19012 456 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 DDB1Q16531 1140 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 LGALS16A8MUM7 142 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 SLCO1A2P46721 670 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 RASGRF1Q13972 1273 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 RBM43Q6ZSC3 357 aaKnown RBP8.52□□□□□ -1.05
CLCN3-209ENST00000513761 USP37Q86T82 979 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 NOA1Q8NC60 698 aaKnown RBP8.52□□□□□ -1.05
CLCN3-209ENST00000513761 EYA3Q99504 573 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 PCDHA12Q9UN75 941 aa8.52□□□□□ -1.05
CLCN3-209ENST00000513761 ABCC12Q96J65 1359 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 PRPF3O43395 683 aaKnown RBP8.51□□□□□ -1.05
CLCN3-209ENST00000513761 CYP2J2P51589 502 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 ACTN3Q08043 901 aaPredicted RBP8.51□□□□□ -1.05
CLCN3-209ENST00000513761 ZKSCAN8Q15776 578 aaPredicted RBP8.51□□□□□ -1.05
CLCN3-209ENST00000513761 USP49Q70CQ1 688 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 SYNE4Q8N205 404 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 ZNF579Q8NAF0 562 aaKnown RBP8.51□□□□□ -1.05
CLCN3-209ENST00000513761 LZTS2Q9BRK4 669 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 NDST4Q9H3R1 872 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 HOMER3Q9NSC5 361 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 BTG4Q9NY30 223 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 PLAAQ9Y263 795 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 PTPN22Q9Y2R2 807 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 PLTPP55058 493 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 TSNAXIP1Q2TAA8 658 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 USH1GQ495M9 461 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 FBXW10Q5XX13 1052 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 CROCCP2Q86T23 111 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 LARP4BQ92615 738 aaKnown RBP8.51□□□□□ -1.05
CLCN3-209ENST00000513761 DISC1Q9NRI5 854 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 KLHL14Q9P2G3 628 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 TUBE1Q9UJT0 475 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 USTQ9Y2C2 406 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 HHATQ5VTY9 493 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 CAPN12Q6ZSI9 719 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 RNF10Q8N5U6 811 aaKnown RBP8.51□□□□□ -1.05
CLCN3-209ENST00000513761 MCUR1Q96AQ8 359 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 ATG3Q9NT62 314 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 ADAMTS1Q9UHI8 967 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 ASAP1Q9ULH1 1129 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.51□□□□□ -1.05
CLCN3-209ENST00000513761 LOC102724159A0A0B4J2E5 919 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 SESN3P58005 492 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 PWP2Q15269 919 aaKnown RBP8.51□□□□□ -1.05
CLCN3-209ENST00000513761 FYB2Q5VWT5 728 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 NYXQ9GZU5 481 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 MYO3AQ8NEV4 1616 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 ALKQ9UM73 1620 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 MAP3K15Q6ZN16 1313 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 A0A1B0GTH6 734 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 CCDC169A6NNP5 214 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 HIP1RO75146 1068 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 KRT26Q7Z3Y9 468 aa8.51□□□□□ -1.05
CLCN3-209ENST00000513761 ZNF526Q8TF50 670 aaPredicted RBP8.51□□□□□ -1.05
CLCN3-209ENST00000513761 FBXO2Q9UK22 296 aaPredicted RBP8.51□□□□□ -1.05
CLCN3-209ENST00000513761 NEO1Q92859 1461 aa8.5□□□□□ -1.05
CLCN3-209ENST00000513761 FAM205CA6NFA0 338 aa8.5□□□□□ -1.05
CLCN3-209ENST00000513761 EXOC3L4Q17RC7 722 aa8.5□□□□□ -1.05
CLCN3-209ENST00000513761 LRCH2Q5VUJ6 765 aa8.5□□□□□ -1.05
CLCN3-209ENST00000513761 PNKPQ96T60 521 aa8.5□□□□□ -1.05
CLCN3-209ENST00000513761 FUT8Q9BYC5 575 aa8.5□□□□□ -1.05
CLCN3-209ENST00000513761 NT5C3AQ9H0P0 336 aa8.5□□□□□ -1.05
CLCN3-209ENST00000513761 PGRMC1O00264 195 aaKnown RBP8.5□□□□□ -1.05
CLCN3-209ENST00000513761 LRRC47Q8N1G4 583 aaKnown RBP8.5□□□□□ -1.05
CLCN3-209ENST00000513761 SH2D3CQ8N5H7 860 aa8.5□□□□□ -1.05
CLCN3-209ENST00000513761 GJA10Q969M2 543 aa8.5□□□□□ -1.05
CLCN3-209ENST00000513761 FAM212AQ96EL1 285 aa8.5□□□□□ -1.05
CLCN3-209ENST00000513761 NRKQ7Z2Y5 1582 aa8.5□□□□□ -1.05
CLCN3-209ENST00000513761 DDX39AO00148 427 aaKnown RBP8.5□□□□□ -1.05
CLCN3-209ENST00000513761 NR1I3Q14994 352 aa8.5□□□□□ -1.05
CLCN3-209ENST00000513761 CCDC38Q502W7 563 aa8.5□□□□□ -1.05
CLCN3-209ENST00000513761 DPH6Q7L8W6 267 aa8.5□□□□□ -1.05
CLCN3-209ENST00000513761 NAP1L4Q99733 375 aaKnown RBP8.5□□□□□ -1.05
CLCN3-209ENST00000513761 TFR2Q9UP52 801 aa8.5□□□□□ -1.05
CLCN3-209ENST00000513761 PALMO75781 387 aa8.5□□□□□ -1.05
CLCN3-209ENST00000513761 SP4Q02446 784 aa8.5□□□□□ -1.05
CLCN3-209ENST00000513761 GFPT1Q06210 699 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms