RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 GNEQ9Y223 722 aaKnown RBP8.53□□□□□ -1.04
HTT-212ENST00000513639 MRPL11Q9Y3B7 192 aaKnown RBP8.53□□□□□ -1.04
HTT-212ENST00000513639 A0A0G2JMZ2 1700 aa8.53□□□□□ -1.04
HTT-212ENST00000513639 RAD50Q92878 1312 aa8.53□□□□□ -1.04
HTT-212ENST00000513639 ERICH2A1L162 156 aa8.52□□□□□ -1.05
HTT-212ENST00000513639 NKRFO15226 690 aaKnown RBP eCLIP8.52□□□□□ -1.05
HTT-212ENST00000513639 KPNA6O60684 536 aa8.52□□□□□ -1.05
HTT-212ENST00000513639 GOLGA8HP0CJ92 632 aa8.52□□□□□ -1.05
HTT-212ENST00000513639 SMPD1P17405 629 aa8.52□□□□□ -1.05
HTT-212ENST00000513639 CHMLP26374 656 aa8.52□□□□□ -1.05
HTT-212ENST00000513639 CALML3P27482 149 aa8.52□□□□□ -1.05
HTT-212ENST00000513639 CPT1AP50416 773 aa8.52□□□□□ -1.05
HTT-212ENST00000513639 RPS6P62753 249 aaKnown RBP8.52□□□□□ -1.05
HTT-212ENST00000513639 FPGSQ05932 587 aa8.52□□□□□ -1.05
HTT-212ENST00000513639 PDE4DQ08499 809 aa8.52□□□□□ -1.05
HTT-212ENST00000513639 SHHQ15465 462 aa8.52□□□□□ -1.05
HTT-212ENST00000513639 DUSP28Q4G0W2 176 aa8.52□□□□□ -1.05
HTT-212ENST00000513639 EEPD1Q7L9B9 569 aa8.52□□□□□ -1.05
HTT-212ENST00000513639 SH3RF1Q7Z6J0 888 aa8.52□□□□□ -1.05
HTT-212ENST00000513639 TLK2Q86UE8 772 aa8.52□□□□□ -1.05
HTT-212ENST00000513639 ADGRF4Q8IZF3 695 aa8.52□□□□□ -1.05
HTT-212ENST00000513639 TMEM199Q8N511 208 aa8.52□□□□□ -1.05
HTT-212ENST00000513639 SAMD3Q8N6K7 520 aa8.52□□□□□ -1.05
HTT-212ENST00000513639 ENAHQ8N8S7 591 aaPredicted RBP8.52□□□□□ -1.05
HTT-212ENST00000513639 NSUN6Q8TEA1 469 aaKnown RBP8.52□□□□□ -1.05
HTT-212ENST00000513639 CLEC4DQ8WXI8 215 aa8.52□□□□□ -1.05
HTT-212ENST00000513639 LENG1Q96BZ8 264 aaPredicted RBP8.52□□□□□ -1.05
HTT-212ENST00000513639 IWS1Q96ST2 819 aa8.52□□□□□ -1.05
HTT-212ENST00000513639 VAT1LQ9HCJ6 419 aa8.52□□□□□ -1.05
HTT-212ENST00000513639 GPHNQ9NQX3 736 aaPredicted RBP8.52□□□□□ -1.05
HTT-212ENST00000513639 MAP3K20Q9NYL2 800 aaKnown RBP8.52□□□□□ -1.05
HTT-212ENST00000513639 TNKSO95271 1327 aa8.52□□□□□ -1.05
HTT-212ENST00000513639 ABCB11O95342 1321 aa8.52□□□□□ -1.05
HTT-212ENST00000513639 NEDD4P46934 1319 aa8.52□□□□□ -1.05
HTT-212ENST00000513639 CUL9Q8IWT3 2517 aa8.51□□□□□ -1.05
HTT-212ENST00000513639 MYH4Q9Y623 1939 aa8.51□□□□□ -1.05
HTT-212ENST00000513639 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.51□□□□□ -1.05
HTT-212ENST00000513639 RBM47A0AV96 593 aaKnown RBP8.51□□□□□ -1.05
HTT-212ENST00000513639 NFIBO00712 420 aa8.51□□□□□ -1.05
HTT-212ENST00000513639 DHX16O60231 1041 aaKnown RBP8.51□□□□□ -1.05
HTT-212ENST00000513639 SUPT20HL2P0C7V6 817 aa8.51□□□□□ -1.05
HTT-212ENST00000513639 PRR29P0C7W0 189 aa8.51□□□□□ -1.05
HTT-212ENST00000513639 PDE4AP27815 886 aa8.51□□□□□ -1.05
HTT-212ENST00000513639 ALDH5A1P51649 535 aaPredicted RBP8.51□□□□□ -1.05
HTT-212ENST00000513639 SMAD3P84022 425 aaKnown RBP8.51□□□□□ -1.05
HTT-212ENST00000513639 ITGA7Q13683 1181 aa8.51□□□□□ -1.05
HTT-212ENST00000513639 MFSD5Q6N075 450 aa8.51□□□□□ -1.05
HTT-212ENST00000513639 FBXO11Q86XK2 927 aa8.51□□□□□ -1.05
HTT-212ENST00000513639 TMTC2Q8N394 836 aa8.51□□□□□ -1.05
HTT-212ENST00000513639 SLC43A3Q8NBI5 491 aa8.51□□□□□ -1.05
HTT-212ENST00000513639 SCFD2Q8WU76 684 aa8.51□□□□□ -1.05
HTT-212ENST00000513639 PDGFCQ9NRA1 345 aa8.51□□□□□ -1.05
HTT-212ENST00000513639 POLR3EQ9NVU0 708 aa8.51□□□□□ -1.05
HTT-212ENST00000513639 MTMR10Q9NXD2 777 aa8.51□□□□□ -1.05
HTT-212ENST00000513639 COL11A1P12107 1806 aaPredicted RBP8.5□□□□□ -1.05
HTT-212ENST00000513639 COL6A3P12111 3177 aa8.5□□□□□ -1.05
HTT-212ENST00000513639 MYADML2A6NDP7 307 aa8.5□□□□□ -1.05
HTT-212ENST00000513639 KLRF2D3W0D1 207 aa8.5□□□□□ -1.05
HTT-212ENST00000513639 IFIT3O14879 490 aaKnown RBP8.5□□□□□ -1.05
HTT-212ENST00000513639 CTAGE5O15320 804 aa8.5□□□□□ -1.05
HTT-212ENST00000513639 ADCY6O43306 1168 aa8.5□□□□□ -1.05
HTT-212ENST00000513639 EIF3JO75822 258 aaKnown RBP8.5□□□□□ -1.05
HTT-212ENST00000513639 GSPT1P15170 499 aaKnown RBP8.5□□□□□ -1.05
HTT-212ENST00000513639 BEX3Q00994 111 aa8.5□□□□□ -1.05
HTT-212ENST00000513639 PPIGQ13427 754 aaKnown RBP eCLIP8.5□□□□□ -1.05
HTT-212ENST00000513639 TTLL4Q14679 1199 aa8.5□□□□□ -1.05
HTT-212ENST00000513639 STXBP2Q15833 593 aa8.5□□□□□ -1.05
HTT-212ENST00000513639 CDC37Q16543 378 aaPredicted RBP8.5□□□□□ -1.05
HTT-212ENST00000513639 USH1GQ495M9 461 aa8.5□□□□□ -1.05
HTT-212ENST00000513639 CXCL17Q6UXB2 119 aa8.5□□□□□ -1.05
HTT-212ENST00000513639 RASGRP2Q7LDG7 609 aa8.5□□□□□ -1.05
HTT-212ENST00000513639 RALYLQ86SE5 291 aaKnown RBP8.5□□□□□ -1.05
HTT-212ENST00000513639 FBXO16Q8IX29 292 aaPredicted RBP8.5□□□□□ -1.05
HTT-212ENST00000513639 SLC17A8Q8NDX2 589 aa8.5□□□□□ -1.05
HTT-212ENST00000513639 NCOA7Q8NI08 942 aa8.5□□□□□ -1.05
HTT-212ENST00000513639 MAP4K1Q92918 833 aa8.5□□□□□ -1.05
HTT-212ENST00000513639 PURBQ96QR8 312 aaKnown RBP8.5□□□□□ -1.05
HTT-212ENST00000513639 AMNQ9BXJ7 453 aa8.5□□□□□ -1.05
HTT-212ENST00000513639 JMJD4Q9H9V9 463 aa8.5□□□□□ -1.05
HTT-212ENST00000513639 TBX21Q9UL17 535 aa8.5□□□□□ -1.05
HTT-212ENST00000513639 STXBP5LQ9Y2K9 1186 aa8.5□□□□□ -1.05
HTT-212ENST00000513639 ASTN1O14525 1302 aa8.5□□□□□ -1.05
HTT-212ENST00000513639 PARP14Q460N5 1801 aa8.5□□□□□ -1.05
HTT-212ENST00000513639 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.49□□□□□ -1.05
HTT-212ENST00000513639 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.49□□□□□ -1.05
HTT-212ENST00000513639 PALM3A6NDB9 673 aaPredicted RBP8.49□□□□□ -1.05
HTT-212ENST00000513639 A6NJR5 290 aa8.49□□□□□ -1.05
HTT-212ENST00000513639 SGSM2O43147 1006 aa8.49□□□□□ -1.05
HTT-212ENST00000513639 CD4P01730 458 aa8.49□□□□□ -1.05
HTT-212ENST00000513639 CYP21A2P08686 494 aa8.49□□□□□ -1.05
HTT-212ENST00000513639 TXNP10599 105 aaKnown RBP8.49□□□□□ -1.05
HTT-212ENST00000513639 EDNRBP24530 442 aa8.49□□□□□ -1.05
HTT-212ENST00000513639 ITGB8P26012 769 aa8.49□□□□□ -1.05
HTT-212ENST00000513639 IRX6P78412 446 aaPredicted RBP8.49□□□□□ -1.05
HTT-212ENST00000513639 WTAPQ15007 396 aa8.49□□□□□ -1.05
HTT-212ENST00000513639 PPP2R5BQ15173 497 aa8.49□□□□□ -1.05
HTT-212ENST00000513639 SEC23AQ15436 765 aa8.49□□□□□ -1.05
HTT-212ENST00000513639 QRICH1Q2TAL8 776 aa8.49□□□□□ -1.05
HTT-212ENST00000513639 C9orf50Q5SZB4 431 aa8.49□□□□□ -1.05
HTT-212ENST00000513639 ZNF697Q5TEC3 545 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms