RNA–Protein interactions for RNA: ENST00000512394.5

SNX2-211, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 763 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-211ENST00000512394 VTI1AQ96AJ9 217 aa19.89■□□□□ 0.77
SNX2-211ENST00000512394 MPHOSPH6Q99547 160 aaKnown RBP19.89■□□□□ 0.77
SNX2-211ENST00000512394 LSG1Q9H089 658 aaKnown RBP19.89■□□□□ 0.77
SNX2-211ENST00000512394 AP5M1Q9H0R1 490 aa19.89■□□□□ 0.77
SNX2-211ENST00000512394 DDX49Q9Y6V7 483 aaKnown RBP19.89■□□□□ 0.77
SNX2-211ENST00000512394 LAMA2P24043 3122 aaKnown RBP19.88■□□□□ 0.77
SNX2-211ENST00000512394 CTAGE5O15320 804 aa19.88■□□□□ 0.77
SNX2-211ENST00000512394 SMPD1P17405 629 aa19.88■□□□□ 0.77
SNX2-211ENST00000512394 FAAP100Q0VG06 881 aa19.88■□□□□ 0.77
SNX2-211ENST00000512394 CDC37Q16543 378 aaPredicted RBP19.88■□□□□ 0.77
SNX2-211ENST00000512394 TAPT1Q6NXT6 567 aa19.88■□□□□ 0.77
SNX2-211ENST00000512394 DEFB123Q8N688 67 aa19.88■□□□□ 0.77
SNX2-211ENST00000512394 UBA5Q9GZZ9 404 aa19.88■□□□□ 0.77
SNX2-211ENST00000512394 PDGFCQ9NRA1 345 aa19.88■□□□□ 0.77
SNX2-211ENST00000512394 Q9Y3F1 56 aa19.88■□□□□ 0.77
SNX2-211ENST00000512394 PARP1P09874 1014 aaKnown RBP19.87■□□□□ 0.77
SNX2-211ENST00000512394 BEX3Q00994 111 aa19.87■□□□□ 0.77
SNX2-211ENST00000512394 TRDNQ13061 729 aa19.87■□□□□ 0.77
SNX2-211ENST00000512394 FSCN1Q16658 493 aaKnown RBP19.87■□□□□ 0.77
SNX2-211ENST00000512394 USH1GQ495M9 461 aa19.87■□□□□ 0.77
SNX2-211ENST00000512394 IFIT1BQ5T764 474 aaKnown RBP19.87■□□□□ 0.77
SNX2-211ENST00000512394 CPVLQ9H3G5 476 aa19.87■□□□□ 0.77
SNX2-211ENST00000512394 RBM8AQ9Y5S9 174 aaKnown RBP19.87■□□□□ 0.77
SNX2-211ENST00000512394 ABCB11O95342 1321 aa19.86■□□□□ 0.77
SNX2-211ENST00000512394 ARVCFO00192 962 aa19.86■□□□□ 0.77
SNX2-211ENST00000512394 ZEB2O60315 1214 aa19.86■□□□□ 0.77
SNX2-211ENST00000512394 CABYRO75952 493 aa19.86■□□□□ 0.77
SNX2-211ENST00000512394 ITGB8P26012 769 aa19.86■□□□□ 0.77
SNX2-211ENST00000512394 CDK7P50613 346 aa19.86■□□□□ 0.77
SNX2-211ENST00000512394 RPS6P62753 249 aaKnown RBP19.86■□□□□ 0.77
SNX2-211ENST00000512394 SHHQ15465 462 aa19.86■□□□□ 0.77
SNX2-211ENST00000512394 ADGRF4Q8IZF3 695 aa19.86■□□□□ 0.77
SNX2-211ENST00000512394 DNERQ8NFT8 737 aa19.86■□□□□ 0.77
SNX2-211ENST00000512394 MAF1Q9H063 256 aa19.86■□□□□ 0.77
SNX2-211ENST00000512394 B4DLN1 442 aa19.85■□□□□ 0.77
SNX2-211ENST00000512394 TLR3O15455 904 aaKnown RBP19.85■□□□□ 0.77
SNX2-211ENST00000512394 DYNC1LI2O43237 492 aaPredicted RBP19.85■□□□□ 0.77
SNX2-211ENST00000512394 DHX16O60231 1041 aaKnown RBP19.85■□□□□ 0.77
SNX2-211ENST00000512394 MRPL12P52815 198 aaKnown RBP19.85■□□□□ 0.77
SNX2-211ENST00000512394 FPGSQ05932 587 aa19.85■□□□□ 0.77
SNX2-211ENST00000512394 PDE4DQ08499 809 aa19.85■□□□□ 0.77
SNX2-211ENST00000512394 C9orf50Q5SZB4 431 aa19.85■□□□□ 0.77
SNX2-211ENST00000512394 Q7L0L9 218 aa19.85■□□□□ 0.77
SNX2-211ENST00000512394 RGS22Q8NE09 1264 aa19.85■□□□□ 0.77
SNX2-211ENST00000512394 TBX21Q9UL17 535 aa19.85■□□□□ 0.77
SNX2-211ENST00000512394 E7EWF7 191 aa19.84■□□□□ 0.77
SNX2-211ENST00000512394 DUSP28Q4G0W2 176 aa19.84■□□□□ 0.77
SNX2-211ENST00000512394 CXCL17Q6UXB2 119 aa19.84■□□□□ 0.77
SNX2-211ENST00000512394 FAM126BQ8IXS8 530 aa19.84■□□□□ 0.77
SNX2-211ENST00000512394 WDR11Q9BZH6 1224 aa19.84■□□□□ 0.77
SNX2-211ENST00000512394 ANO2Q9NQ90 1003 aa19.84■□□□□ 0.77
SNX2-211ENST00000512394 TIMP1P01033 207 aa19.83■□□□□ 0.77
SNX2-211ENST00000512394 PTGS1P23219 599 aa19.83■□□□□ 0.77
SNX2-211ENST00000512394 EDNRBP24530 442 aa19.83■□□□□ 0.77
SNX2-211ENST00000512394 NECTIN1Q15223 517 aa19.83■□□□□ 0.77
SNX2-211ENST00000512394 SEC23AQ15436 765 aa19.83■□□□□ 0.77
SNX2-211ENST00000512394 QRICH1Q2TAL8 776 aa19.83■□□□□ 0.77
SNX2-211ENST00000512394 CYB5R4Q7L1T6 521 aa19.83■□□□□ 0.77
SNX2-211ENST00000512394 RALYLQ86SE5 291 aaKnown RBP19.83■□□□□ 0.77
SNX2-211ENST00000512394 NCOA7Q8NI08 942 aa19.83■□□□□ 0.77
SNX2-211ENST00000512394 MTA3Q9BTC8 594 aa19.83■□□□□ 0.77
SNX2-211ENST00000512394 SEZ6LQ9BYH1 1024 aa19.83■□□□□ 0.77
SNX2-211ENST00000512394 COL6A3P12111 3177 aa19.83■□□□□ 0.76
SNX2-211ENST00000512394 RBM47A0AV96 593 aaKnown RBP19.82■□□□□ 0.76
SNX2-211ENST00000512394 TMEM63BQ5T3F8 832 aa19.82■□□□□ 0.76
SNX2-211ENST00000512394 FAM109BQ6ICB4 259 aaPredicted RBP19.82■□□□□ 0.76
SNX2-211ENST00000512394 STOX1Q6ZVD7 989 aa19.82■□□□□ 0.76
SNX2-211ENST00000512394 FBXO11Q86XK2 927 aa19.82■□□□□ 0.76
SNX2-211ENST00000512394 MCF2L2Q86YR7 1114 aa19.82■□□□□ 0.76
SNX2-211ENST00000512394 MTMR10Q9NXD2 777 aa19.82■□□□□ 0.76
SNX2-211ENST00000512394 TAF6LQ9Y6J9 622 aa19.82■□□□□ 0.76
SNX2-211ENST00000512394 ERICH2A1L162 156 aa19.81■□□□□ 0.76
SNX2-211ENST00000512394 CPT1AP50416 773 aa19.81■□□□□ 0.76
SNX2-211ENST00000512394 ITGA7Q13683 1181 aa19.81■□□□□ 0.76
SNX2-211ENST00000512394 PPP2R5BQ15173 497 aa19.81■□□□□ 0.76
SNX2-211ENST00000512394 SLC43A3Q8NBI5 491 aa19.81■□□□□ 0.76
SNX2-211ENST00000512394 SCFD2Q8WU76 684 aa19.81■□□□□ 0.76
SNX2-211ENST00000512394 RNPC3Q96LT9 517 aaKnown RBP19.81■□□□□ 0.76
SNX2-211ENST00000512394 JMJD4Q9H9V9 463 aa19.81■□□□□ 0.76
SNX2-211ENST00000512394 VAT1LQ9HCJ6 419 aa19.81■□□□□ 0.76
SNX2-211ENST00000512394 MRPL11Q9Y3B7 192 aaKnown RBP19.81■□□□□ 0.76
SNX2-211ENST00000512394 SLC27A2O14975 620 aa19.8■□□□□ 0.76
SNX2-211ENST00000512394 NKRFO15226 690 aaKnown RBP eCLIP19.8■□□□□ 0.76
SNX2-211ENST00000512394 CD4P01730 458 aa19.8■□□□□ 0.76
SNX2-211ENST00000512394 EPHB4P54760 987 aa19.8■□□□□ 0.76
SNX2-211ENST00000512394 SART3Q15020 963 aaKnown RBP19.8■□□□□ 0.76
SNX2-211ENST00000512394 RNF20Q5VTR2 975 aa19.8■□□□□ 0.76
SNX2-211ENST00000512394 CREB3L3Q68CJ9 461 aa19.8■□□□□ 0.76
SNX2-211ENST00000512394 MFSD5Q6N075 450 aa19.8■□□□□ 0.76
SNX2-211ENST00000512394 MB21D2Q8IYB1 491 aaPredicted RBP19.8■□□□□ 0.76
SNX2-211ENST00000512394 OR6J1Q8NGC5 347 aa19.8■□□□□ 0.76
SNX2-211ENST00000512394 POLR3EQ9NVU0 708 aa19.8■□□□□ 0.76
SNX2-211ENST00000512394 KIAA1217Q5T5P2 1943 aa19.79■□□□□ 0.76
SNX2-211ENST00000512394 KLRF2D3W0D1 207 aa19.79■□□□□ 0.76
SNX2-211ENST00000512394 IFIT3O14879 490 aaKnown RBP19.79■□□□□ 0.76
SNX2-211ENST00000512394 EPB41L2O43491 1005 aaKnown RBP19.79■□□□□ 0.76
SNX2-211ENST00000512394 SMAD3P84022 425 aaKnown RBP19.79■□□□□ 0.76
SNX2-211ENST00000512394 BRDTQ58F21 947 aaPredicted RBP19.79■□□□□ 0.76
SNX2-211ENST00000512394 ZNF697Q5TEC3 545 aa19.79■□□□□ 0.76
SNX2-211ENST00000512394 STAG2Q8N3U4 1231 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms