RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 ICAM1P05362 532 aa6.85□□□□□ -1.31
RNF4-217ENST00000511892 SNHG28P0DPA3 235 aa6.85□□□□□ -1.31
RNF4-217ENST00000511892 RARBP10826 455 aa6.85□□□□□ -1.31
RNF4-217ENST00000511892 PDHBP11177 359 aa6.85□□□□□ -1.31
RNF4-217ENST00000511892 ALAS1P13196 640 aa6.85□□□□□ -1.31
RNF4-217ENST00000511892 AKR1A1P14550 325 aa6.85□□□□□ -1.31
RNF4-217ENST00000511892 ADCYAP1R1P41586 468 aa6.85□□□□□ -1.31
RNF4-217ENST00000511892 MAGEA10P43363 369 aaPredicted RBP6.85□□□□□ -1.31
RNF4-217ENST00000511892 RTP1P59025 263 aa6.85□□□□□ -1.31
RNF4-217ENST00000511892 ZNF543Q08ER8 600 aa6.85□□□□□ -1.31
RNF4-217ENST00000511892 SNX17Q15036 470 aa6.85□□□□□ -1.31
RNF4-217ENST00000511892 CCDC96Q2M329 555 aa6.85□□□□□ -1.31
RNF4-217ENST00000511892 TKFCQ3LXA3 575 aa6.85□□□□□ -1.31
RNF4-217ENST00000511892 SYDE2Q5VT97 1194 aa6.85□□□□□ -1.31
RNF4-217ENST00000511892 CCSAPQ6IQ19 270 aaPredicted RBP6.85□□□□□ -1.31
RNF4-217ENST00000511892 CCDC144CPQ8IYA2 1237 aa6.85□□□□□ -1.31
RNF4-217ENST00000511892 ANKS1AQ92625 1134 aa6.85□□□□□ -1.31
RNF4-217ENST00000511892 FERMT2Q96AC1 680 aa6.85□□□□□ -1.31
RNF4-217ENST00000511892 RNF41Q9H4P4 317 aaPredicted RBP6.85□□□□□ -1.31
RNF4-217ENST00000511892 ACAD9Q9H845 621 aa6.85□□□□□ -1.31
RNF4-217ENST00000511892 GPCPD1Q9NPB8 672 aa6.85□□□□□ -1.31
RNF4-217ENST00000511892 XPNPEP3Q9NQH7 507 aa6.85□□□□□ -1.31
RNF4-217ENST00000511892 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.85□□□□□ -1.31
RNF4-217ENST00000511892 CYP39A1Q9NYL5 469 aa6.85□□□□□ -1.31
RNF4-217ENST00000511892 PHF24Q9UPV7 400 aa6.85□□□□□ -1.31
RNF4-217ENST00000511892 DDX49Q9Y6V7 483 aaKnown RBP6.85□□□□□ -1.31
RNF4-217ENST00000511892 SYNRGQ9UMZ2 1314 aa6.84□□□□□ -1.31
RNF4-217ENST00000511892 MYADML2A6NDP7 307 aa6.84□□□□□ -1.31
RNF4-217ENST00000511892 GOLGA8CPA6NN73 597 aa6.84□□□□□ -1.31
RNF4-217ENST00000511892 KBTBD13C9JR72 458 aa6.84□□□□□ -1.31
RNF4-217ENST00000511892 CTAGE5O15320 804 aa6.84□□□□□ -1.31
RNF4-217ENST00000511892 CHMLP26374 656 aa6.84□□□□□ -1.31
RNF4-217ENST00000511892 MDM2Q00987 491 aaPredicted RBP6.84□□□□□ -1.31
RNF4-217ENST00000511892 PTH1RQ03431 593 aa6.84□□□□□ -1.31
RNF4-217ENST00000511892 ACVR2BQ13705 512 aa6.84□□□□□ -1.31
RNF4-217ENST00000511892 IMMTQ16891 758 aaKnown RBP6.84□□□□□ -1.31
RNF4-217ENST00000511892 CCDC144BQ3MJ40 725 aa6.84□□□□□ -1.31
RNF4-217ENST00000511892 TRIM60Q495X7 471 aa6.84□□□□□ -1.31
RNF4-217ENST00000511892 C1orf53Q5VUE5 145 aa6.84□□□□□ -1.31
RNF4-217ENST00000511892 ARMCX2Q7L311 632 aa6.84□□□□□ -1.31
RNF4-217ENST00000511892 DGKHQ86XP1 1220 aa6.84□□□□□ -1.31
RNF4-217ENST00000511892 ENAHQ8N8S7 591 aaPredicted RBP6.84□□□□□ -1.31
RNF4-217ENST00000511892 KLHDC9Q8NEP7 349 aa6.84□□□□□ -1.31
RNF4-217ENST00000511892 CLEC4DQ8WXI8 215 aa6.84□□□□□ -1.31
RNF4-217ENST00000511892 ESR2Q92731 530 aa6.84□□□□□ -1.31
RNF4-217ENST00000511892 PURBQ96QR8 312 aaKnown RBP6.84□□□□□ -1.31
RNF4-217ENST00000511892 CPVLQ9H3G5 476 aa6.84□□□□□ -1.31
RNF4-217ENST00000511892 ABHD16BQ9H3Z7 469 aa6.84□□□□□ -1.31
RNF4-217ENST00000511892 ZSWIM5Q9P217 1185 aa6.84□□□□□ -1.31
RNF4-217ENST00000511892 CTNNA3Q9UI47 895 aa6.84□□□□□ -1.31
RNF4-217ENST00000511892 ZHX1Q9UKY1 873 aaPredicted RBP6.84□□□□□ -1.31
RNF4-217ENST00000511892 FAM184BQ9ULE4 1060 aa6.84□□□□□ -1.31
RNF4-217ENST00000511892 CCPG1Q9ULG6 757 aa6.84□□□□□ -1.31
RNF4-217ENST00000511892 CNPY2Q9Y2B0 182 aa6.84□□□□□ -1.31
RNF4-217ENST00000511892 ATP11BQ9Y2G3 1177 aa6.84□□□□□ -1.31
RNF4-217ENST00000511892 RBM19Q9Y4C8 960 aaKnown RBP6.84□□□□□ -1.31
RNF4-217ENST00000511892 PRUNE2Q8WUY3 3088 aa6.84□□□□□ -1.31
RNF4-217ENST00000511892 TRIP12Q14669 1992 aaPredicted RBP6.84□□□□□ -1.32
RNF4-217ENST00000511892 CHD9Q3L8U1 2897 aa6.83□□□□□ -1.32
RNF4-217ENST00000511892 GBF1Q92538 1859 aa6.83□□□□□ -1.32
RNF4-217ENST00000511892 DOCK5Q9H7D0 1870 aa6.83□□□□□ -1.32
RNF4-217ENST00000511892 SCN10AQ9Y5Y9 1956 aa6.83□□□□□ -1.32
RNF4-217ENST00000511892 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.83□□□□□ -1.32
RNF4-217ENST00000511892 A0A1W2PQ45 241 aaPredicted RBP6.83□□□□□ -1.32
RNF4-217ENST00000511892 A0A1W2PQY0 241 aa6.83□□□□□ -1.32
RNF4-217ENST00000511892 NFIBO00712 420 aa6.83□□□□□ -1.32
RNF4-217ENST00000511892 DUSP11O75319 330 aaKnown RBP6.83□□□□□ -1.32
RNF4-217ENST00000511892 GOLGA8HP0CJ92 632 aa6.83□□□□□ -1.32
RNF4-217ENST00000511892 PTGS1P23219 599 aa6.83□□□□□ -1.32
RNF4-217ENST00000511892 NT5C2P49902 561 aa6.83□□□□□ -1.32
RNF4-217ENST00000511892 GJA9P57773 515 aa6.83□□□□□ -1.32
RNF4-217ENST00000511892 KCNA10Q16322 511 aa6.83□□□□□ -1.32
RNF4-217ENST00000511892 TMEM63BQ5T3F8 832 aa6.83□□□□□ -1.32
RNF4-217ENST00000511892 TAPT1Q6NXT6 567 aa6.83□□□□□ -1.32
RNF4-217ENST00000511892 NSMFQ6X4W1 530 aa6.83□□□□□ -1.32
RNF4-217ENST00000511892 CYB5R4Q7L1T6 521 aa6.83□□□□□ -1.32
RNF4-217ENST00000511892 SH3RF1Q7Z6J0 888 aa6.83□□□□□ -1.32
RNF4-217ENST00000511892 RNF180Q86T96 592 aa6.83□□□□□ -1.32
RNF4-217ENST00000511892 HS6ST3Q8IZP7 471 aa6.83□□□□□ -1.32
RNF4-217ENST00000511892 PNMA1Q8ND90 353 aa6.83□□□□□ -1.32
RNF4-217ENST00000511892 OXER1Q8TDS5 423 aa6.83□□□□□ -1.32
RNF4-217ENST00000511892 LRCH3Q96II8 777 aa6.83□□□□□ -1.32
RNF4-217ENST00000511892 ZSCAN10Q96SZ4 725 aaPredicted RBP6.83□□□□□ -1.32
RNF4-217ENST00000511892 TSEN34Q9BSV6 310 aaKnown RBP6.83□□□□□ -1.32
RNF4-217ENST00000511892 UPF3AQ9H1J1 476 aaKnown RBP6.83□□□□□ -1.32
RNF4-217ENST00000511892 TAF6LQ9Y6J9 622 aa6.83□□□□□ -1.32
RNF4-217ENST00000511892 MYO9BQ13459 2157 aa6.83□□□□□ -1.32
RNF4-217ENST00000511892 SCN5AQ14524 2016 aa6.83□□□□□ -1.32
RNF4-217ENST00000511892 TNKSO95271 1327 aa6.82□□□□□ -1.32
RNF4-217ENST00000511892 RAD50Q92878 1312 aa6.82□□□□□ -1.32
RNF4-217ENST00000511892 TRIM43BA6NCK2 446 aa6.82□□□□□ -1.32
RNF4-217ENST00000511892 SGSM2O43147 1006 aa6.82□□□□□ -1.32
RNF4-217ENST00000511892 CYP21A2P08686 494 aa6.82□□□□□ -1.32
RNF4-217ENST00000511892 ITGB8P26012 769 aa6.82□□□□□ -1.32
RNF4-217ENST00000511892 CST5P28325 142 aaPredicted RBP6.82□□□□□ -1.32
RNF4-217ENST00000511892 ACLYP53396 1101 aa6.82□□□□□ -1.32
RNF4-217ENST00000511892 NKX3-2P78367 333 aa6.82□□□□□ -1.32
RNF4-217ENST00000511892 TLE2Q04725 743 aa6.82□□□□□ -1.32
RNF4-217ENST00000511892 BAATQ14032 418 aaPredicted RBP6.82□□□□□ -1.32
RNF4-217ENST00000511892 SEC23AQ15436 765 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms