RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 CYP3A4P08684 503 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 TYRO3Q06418 890 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 TMEM266Q2M3C6 531 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 SYMPKQ92797 1274 aaKnown RBP17.23■□□□□ 0.35
SCLT1-209ENST00000511426 CCSER1Q9C0I3 900 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 KIAA1468Q9P260 1216 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 CCPG1Q9ULG6 757 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 ADAMTS5Q9UNA0 930 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 CTDP1Q9Y5B0 961 aaPredicted RBP17.23■□□□□ 0.35
SCLT1-209ENST00000511426 ZNF536O15090 1300 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 SPDYE5A6NIY4 337 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 POTECB2RU33 542 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 USP17L15C9J2P7 530 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 USP17L13C9JLJ4 530 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 USP17L11C9JVI0 530 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 USP17L18D6R9N7 530 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 USP17L22D6RA61 530 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 USP17L17D6RBQ6 530 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 USP17L19D6RCP7 530 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 USP17L20D6RJB6 530 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 OPLAHO14841 1288 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 TBX3O15119 743 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 CIITAP33076 1130 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 FXR2P51116 673 aaKnown RBP eCLIP17.23■□□□□ 0.35
SCLT1-209ENST00000511426 GRIN1Q05586 938 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 USP17L24Q0WX57 530 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 COG2Q14746 738 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 ZRSR1Q15695 479 aaKnown RBP17.23■□□□□ 0.35
SCLT1-209ENST00000511426 CALCRLQ16602 461 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 USP17L6PQ6QN14 398 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 IQUBQ8NA54 791 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 PROCA1Q8NCQ7 364 aaPredicted RBP17.23■□□□□ 0.35
SCLT1-209ENST00000511426 MTMR9Q96QG7 549 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 ANO10Q9NW15 660 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 HOXC10Q9NYD6 342 aa17.23■□□□□ 0.35
SCLT1-209ENST00000511426 POLR2DO15514 142 aaKnown RBP17.22■□□□□ 0.35
SCLT1-209ENST00000511426 HMGCS2P54868 508 aa17.22■□□□□ 0.35
SCLT1-209ENST00000511426 FKBP1BP68106 108 aa17.22■□□□□ 0.35
SCLT1-209ENST00000511426 PDIA5Q14554 519 aa17.22■□□□□ 0.35
SCLT1-209ENST00000511426 STX1AQ16623 288 aa17.22■□□□□ 0.35
SCLT1-209ENST00000511426 EAPPQ56P03 285 aaPredicted RBP17.22■□□□□ 0.35
SCLT1-209ENST00000511426 CCDC174Q6PII3 467 aa17.22■□□□□ 0.35
SCLT1-209ENST00000511426 CKAP2LQ8IYA6 745 aa17.22■□□□□ 0.35
SCLT1-209ENST00000511426 ANP32BQ92688 251 aaKnown RBP17.22■□□□□ 0.35
SCLT1-209ENST00000511426 TMEM60Q9H2L4 133 aa17.22■□□□□ 0.35
SCLT1-209ENST00000511426 CUEDC2Q9H467 287 aa17.22■□□□□ 0.35
SCLT1-209ENST00000511426 MAGEF1Q9HAY2 307 aa17.22■□□□□ 0.35
SCLT1-209ENST00000511426 DDX25Q9UHL0 483 aaKnown RBP17.22■□□□□ 0.35
SCLT1-209ENST00000511426 VWA5AO00534 786 aa17.21■□□□□ 0.35
SCLT1-209ENST00000511426 SOCS7O14512 581 aa17.21■□□□□ 0.35
SCLT1-209ENST00000511426 SLFN14P0C7P3 912 aa17.21■□□□□ 0.35
SCLT1-209ENST00000511426 DSG3P32926 999 aa17.21■□□□□ 0.35
SCLT1-209ENST00000511426 HSD17B4P51659 736 aa17.21■□□□□ 0.35
SCLT1-209ENST00000511426 ARHGAP4P98171 946 aa17.21■□□□□ 0.35
SCLT1-209ENST00000511426 SEMA3FQ13275 785 aa17.21■□□□□ 0.35
SCLT1-209ENST00000511426 TKFCQ3LXA3 575 aa17.21■□□□□ 0.35
SCLT1-209ENST00000511426 CATSPERGQ6ZRH7 1159 aa17.21■□□□□ 0.35
SCLT1-209ENST00000511426 SLFN12Q8IYM2 578 aa17.21■□□□□ 0.35
SCLT1-209ENST00000511426 CEP57L1Q8IYX8 460 aa17.21■□□□□ 0.35
SCLT1-209ENST00000511426 IGSF22Q8N9C0 903 aa17.21■□□□□ 0.35
SCLT1-209ENST00000511426 FAM200AQ8TCP9 573 aa17.21■□□□□ 0.35
SCLT1-209ENST00000511426 CCDC39Q9UFE4 941 aa17.21■□□□□ 0.35
SCLT1-209ENST00000511426 TUBE1Q9UJT0 475 aa17.21■□□□□ 0.35
SCLT1-209ENST00000511426 STK24Q9Y6E0 443 aa17.21■□□□□ 0.35
SCLT1-209ENST00000511426 MRVI1Q9Y6F6 885 aa17.21■□□□□ 0.35
SCLT1-209ENST00000511426 POLR2AP24928 1970 aaKnown RBP17.2■□□□□ 0.34
SCLT1-209ENST00000511426 OTOFQ9HC10 1997 aa17.2■□□□□ 0.34
SCLT1-209ENST00000511426 MYL1P05976 194 aa17.2■□□□□ 0.34
SCLT1-209ENST00000511426 SNAP25P60880 206 aa17.2■□□□□ 0.34
SCLT1-209ENST00000511426 PPIL2Q13356 520 aa17.2■□□□□ 0.34
SCLT1-209ENST00000511426 IL17AQ16552 155 aa17.2■□□□□ 0.34
SCLT1-209ENST00000511426 LONRF3Q496Y0 759 aa17.2■□□□□ 0.34
SCLT1-209ENST00000511426 Q4G0T1 1027 aa17.2■□□□□ 0.34
SCLT1-209ENST00000511426 RBSNQ9H1K0 784 aa17.2■□□□□ 0.34
SCLT1-209ENST00000511426 KCNH4Q9UQ05 1017 aa17.2■□□□□ 0.34
SCLT1-209ENST00000511426 DCAF8L1A6NGE4 600 aa17.2■□□□□ 0.34
SCLT1-209ENST00000511426 ACTN4O43707 911 aaKnown RBP17.2■□□□□ 0.34
SCLT1-209ENST00000511426 XRCC6P12956 609 aaKnown RBP eCLIP17.2■□□□□ 0.345e-6■■□□□ 13.3
SCLT1-209ENST00000511426 HOXA7P31268 230 aaPredicted RBP17.2■□□□□ 0.34
SCLT1-209ENST00000511426 UBA7P41226 1012 aa17.2■□□□□ 0.34
SCLT1-209ENST00000511426 POTEDQ86YR6 584 aa17.2■□□□□ 0.34
SCLT1-209ENST00000511426 MB21D1Q8N884 522 aa17.2■□□□□ 0.34
SCLT1-209ENST00000511426 TRIML1Q8N9V2 468 aa17.2■□□□□ 0.34
SCLT1-209ENST00000511426 EPSTI1Q96J88 318 aa17.2■□□□□ 0.34
SCLT1-209ENST00000511426 NAT10Q9H0A0 1025 aaKnown RBP17.2■□□□□ 0.34
SCLT1-209ENST00000511426 A0A0G2JLL6 359 aaPredicted RBP17.19■□□□□ 0.34
SCLT1-209ENST00000511426 EDIL3O43854 480 aa17.19■□□□□ 0.34
SCLT1-209ENST00000511426 TDP2O95551 362 aa17.19■□□□□ 0.34
SCLT1-209ENST00000511426 CFBP00751 764 aa17.19■□□□□ 0.34
SCLT1-209ENST00000511426 POSTNQ15063 836 aa17.19■□□□□ 0.34
SCLT1-209ENST00000511426 SPECC1Q5M775 1068 aa17.19■□□□□ 0.34
SCLT1-209ENST00000511426 LDLRAD1Q5T700 205 aa17.19■□□□□ 0.34
SCLT1-209ENST00000511426 NT5DC1Q5TFE4 455 aa17.19■□□□□ 0.34
SCLT1-209ENST00000511426 PRRT2Q7Z6L0 340 aaPredicted RBP17.19■□□□□ 0.34
SCLT1-209ENST00000511426 FAM20AQ96MK3 541 aa17.19■□□□□ 0.34
SCLT1-209ENST00000511426 KCNMB3Q9NPA1 279 aa17.19■□□□□ 0.34
SCLT1-209ENST00000511426 PARP14Q460N5 1801 aa17.19■□□□□ 0.34
SCLT1-209ENST00000511426 LOC285556D6RIA3 1793 aa17.19■□□□□ 0.34
SCLT1-209ENST00000511426 SLC37A4O43826 429 aa17.18■□□□□ 0.34
SCLT1-209ENST00000511426 PRKG1Q13976 671 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms