RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 CNTN2Q02246 1040 aa19.99■□□□□ 0.79
CLDND1-221ENST00000510541 MLLT1Q03111 559 aaPredicted RBP19.99■□□□□ 0.79
CLDND1-221ENST00000510541 NSMFQ6X4W1 530 aa19.99■□□□□ 0.79
CLDND1-221ENST00000510541 ARMCX2Q7L311 632 aa19.99■□□□□ 0.79
CLDND1-221ENST00000510541 FAM177A1Q8N128 213 aaPredicted RBP19.99■□□□□ 0.79
CLDND1-221ENST00000510541 PIGSQ96S52 555 aa19.99■□□□□ 0.79
CLDND1-221ENST00000510541 FAM217BQ9NTX9 383 aaPredicted RBP19.99■□□□□ 0.79
CLDND1-221ENST00000510541 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.99■□□□□ 0.79
CLDND1-221ENST00000510541 Q9Y3F1 56 aa19.99■□□□□ 0.79
CLDND1-221ENST00000510541 BAZ2BQ9UIF8 2168 aaKnown RBP19.99■□□□□ 0.79
CLDND1-221ENST00000510541 ASTN1O14525 1302 aa19.99■□□□□ 0.79
CLDND1-221ENST00000510541 KLF18A0A0U1RQI7 1052 aa19.98■□□□□ 0.79
CLDND1-221ENST00000510541 ALDH5A1P51649 535 aaPredicted RBP19.98■□□□□ 0.79
CLDND1-221ENST00000510541 FGD1P98174 961 aa19.98■□□□□ 0.79
CLDND1-221ENST00000510541 RTN1Q16799 776 aa19.98■□□□□ 0.79
CLDND1-221ENST00000510541 MICU3Q86XE3 530 aa19.98■□□□□ 0.79
CLDND1-221ENST00000510541 BRF1Q92994 677 aa19.98■□□□□ 0.79
CLDND1-221ENST00000510541 MYL10Q9BUA6 226 aa19.98■□□□□ 0.79
CLDND1-221ENST00000510541 VAT1LQ9HCJ6 419 aa19.98■□□□□ 0.79
CLDND1-221ENST00000510541 VTA1Q9NP79 307 aa19.98■□□□□ 0.79
CLDND1-221ENST00000510541 SEC63Q9UGP8 760 aaKnown RBP19.98■□□□□ 0.79
CLDND1-221ENST00000510541 MKI67P46013 3256 aaKnown RBP19.97■□□□□ 0.79
CLDND1-221ENST00000510541 RBM47A0AV96 593 aaKnown RBP19.97■□□□□ 0.79
CLDND1-221ENST00000510541 ACVR2BQ13705 512 aa19.97■□□□□ 0.79
CLDND1-221ENST00000510541 TOB2Q14106 344 aaPredicted RBP19.97■□□□□ 0.79
CLDND1-221ENST00000510541 ANKRD1Q15327 319 aa19.97■□□□□ 0.79
CLDND1-221ENST00000510541 USH1GQ495M9 461 aa19.97■□□□□ 0.79
CLDND1-221ENST00000510541 CCDC144CPQ8IYA2 1237 aa19.97■□□□□ 0.79
CLDND1-221ENST00000510541 ARRDC4Q8NCT1 418 aa19.97■□□□□ 0.79
CLDND1-221ENST00000510541 SYTL5Q8TDW5 730 aaPredicted RBP19.97■□□□□ 0.79
CLDND1-221ENST00000510541 NSUN6Q8TEA1 469 aaKnown RBP19.97■□□□□ 0.79
CLDND1-221ENST00000510541 FAM184BQ9ULE4 1060 aa19.97■□□□□ 0.79
CLDND1-221ENST00000510541 FRMPD3Q5JV73 1810 aa19.97■□□□□ 0.79
CLDND1-221ENST00000510541 PTPDC1A2A3K4 754 aa19.96■□□□□ 0.79
CLDND1-221ENST00000510541 DUSP11O75319 330 aaKnown RBP19.96■□□□□ 0.79
CLDND1-221ENST00000510541 PLEKHA8P1O95397 391 aa19.96■□□□□ 0.79
CLDND1-221ENST00000510541 TFRCP02786 760 aaKnown RBP19.96■□□□□ 0.79
CLDND1-221ENST00000510541 SLC4A3P48751 1232 aa19.96■□□□□ 0.79
CLDND1-221ENST00000510541 MNX1P50219 401 aaPredicted RBP19.96■□□□□ 0.79
CLDND1-221ENST00000510541 METAP2P50579 478 aaKnown RBP eCLIP19.96■□□□□ 0.79
CLDND1-221ENST00000510541 IQSEC1Q6DN90 963 aa19.96■□□□□ 0.79
CLDND1-221ENST00000510541 PPP1R18Q6NYC8 613 aa19.96■□□□□ 0.79
CLDND1-221ENST00000510541 TCEANC2Q96MN5 208 aa19.96■□□□□ 0.79
CLDND1-221ENST00000510541 GLT8D2Q9H1C3 349 aa19.96■□□□□ 0.79
CLDND1-221ENST00000510541 FRMPD4Q14CM0 1322 aa19.96■□□□□ 0.79
CLDND1-221ENST00000510541 CNTNAP5Q8WYK1 1306 aa19.96■□□□□ 0.79
CLDND1-221ENST00000510541 GOLGA8AA7E2F4 631 aa19.95■□□□□ 0.78
CLDND1-221ENST00000510541 GOLGA8BA8MQT2 603 aa19.95■□□□□ 0.78
CLDND1-221ENST00000510541 DNM1LO00429 736 aa19.95■□□□□ 0.78
CLDND1-221ENST00000510541 CAPN15O75808 1086 aa19.95■□□□□ 0.78
CLDND1-221ENST00000510541 COL6A1P12109 1028 aa19.95■□□□□ 0.78
CLDND1-221ENST00000510541 CST5P28325 142 aaPredicted RBP19.95■□□□□ 0.78
CLDND1-221ENST00000510541 PDIA3P30101 505 aaKnown RBP19.95■□□□□ 0.78
CLDND1-221ENST00000510541 RBM25P49756 843 aaKnown RBP19.95■□□□□ 0.78
CLDND1-221ENST00000510541 SLC30A10Q6XR72 485 aa19.95■□□□□ 0.78
CLDND1-221ENST00000510541 TSEN34Q9BSV6 310 aaKnown RBP19.95■□□□□ 0.78
CLDND1-221ENST00000510541 LRRC37A2A6NM11 1700 aa19.94■□□□□ 0.78
CLDND1-221ENST00000510541 FARP2O94887 1054 aaPredicted RBP19.94■□□□□ 0.78
CLDND1-221ENST00000510541 RARBP10826 455 aa19.94■□□□□ 0.78
CLDND1-221ENST00000510541 CPA1P15085 419 aa19.94■□□□□ 0.78
CLDND1-221ENST00000510541 IFNAR1P17181 557 aa19.94■□□□□ 0.78
CLDND1-221ENST00000510541 APOBRQ0VD83 1088 aa19.94■□□□□ 0.78
CLDND1-221ENST00000510541 NTRK3Q16288 839 aa19.94■□□□□ 0.78
CLDND1-221ENST00000510541 RNF26Q9BY78 433 aaPredicted RBP19.94■□□□□ 0.78
CLDND1-221ENST00000510541 UPF3AQ9H1J1 476 aaKnown RBP19.94■□□□□ 0.78
CLDND1-221ENST00000510541 PDRG1Q9NUG6 133 aa19.94■□□□□ 0.78
CLDND1-221ENST00000510541 TNRC18O15417 2968 aaPredicted RBP19.94■□□□□ 0.78
CLDND1-221ENST00000510541 MCM3APO60318 1980 aa19.94■□□□□ 0.78
CLDND1-221ENST00000510541 GCOM1H8Y6P7 765 aaPredicted RBP19.93■□□□□ 0.78
CLDND1-221ENST00000510541 NKRFO15226 690 aaKnown RBP eCLIP19.93■□□□□ 0.78
CLDND1-221ENST00000510541 STAM2O75886 525 aa19.93■□□□□ 0.78
CLDND1-221ENST00000510541 SEC24BO95487 1268 aa19.93■□□□□ 0.78
CLDND1-221ENST00000510541 POLR2MP0CAP2 368 aa19.93■□□□□ 0.78
CLDND1-221ENST00000510541 CDC27P30260 824 aa19.93■□□□□ 0.78
CLDND1-221ENST00000510541 TAPT1Q6NXT6 567 aa19.93■□□□□ 0.78
CLDND1-221ENST00000510541 XRRA1Q6P2D8 792 aa19.93■□□□□ 0.78
CLDND1-221ENST00000510541 NECAB2Q7Z6G3 386 aa19.93■□□□□ 0.78
CLDND1-221ENST00000510541 HOMER1Q86YM7 354 aa19.93■□□□□ 0.78
CLDND1-221ENST00000510541 PDE4DIPQ5VU43 2346 aa19.92■□□□□ 0.78
CLDND1-221ENST00000510541 PRPF3O43395 683 aaKnown RBP19.92■□□□□ 0.78
CLDND1-221ENST00000510541 TAL1P17542 331 aaPredicted RBP19.92■□□□□ 0.78
CLDND1-221ENST00000510541 RXRAP19793 462 aa19.92■□□□□ 0.78
CLDND1-221ENST00000510541 CCDC144BQ3MJ40 725 aa19.92■□□□□ 0.78
CLDND1-221ENST00000510541 PRAMEF19Q5SWL8 479 aa19.92■□□□□ 0.78
CLDND1-221ENST00000510541 C1orf53Q5VUE5 145 aa19.92■□□□□ 0.78
CLDND1-221ENST00000510541 RMDN3Q96TC7 470 aa19.92■□□□□ 0.78
CLDND1-221ENST00000510541 HTATIP2Q9BUP3 242 aa19.92■□□□□ 0.78
CLDND1-221ENST00000510541 GNEQ9Y223 722 aaKnown RBP19.92■□□□□ 0.78
CLDND1-221ENST00000510541 ESYT2A0FGR8 921 aa19.91■□□□□ 0.78
CLDND1-221ENST00000510541 EIF3JO75822 258 aaKnown RBP19.91■□□□□ 0.78
CLDND1-221ENST00000510541 MYCP01106 439 aaPredicted RBP19.91■□□□□ 0.78
CLDND1-221ENST00000510541 CALML3P27482 149 aa19.91■□□□□ 0.78
CLDND1-221ENST00000510541 CNGA1P29973 690 aa19.91■□□□□ 0.78
CLDND1-221ENST00000510541 ADD1P35611 737 aaKnown RBP19.91■□□□□ 0.78
CLDND1-221ENST00000510541 GJA9P57773 515 aa19.91■□□□□ 0.78
CLDND1-221ENST00000510541 MCTP2Q6DN12 878 aa19.91■□□□□ 0.78
CLDND1-221ENST00000510541 KLHDC9Q8NEP7 349 aa19.91■□□□□ 0.78
CLDND1-221ENST00000510541 TBC1D5Q92609 795 aa19.91■□□□□ 0.78
CLDND1-221ENST00000510541 UPF3BQ9BZI7 483 aaKnown RBP19.91■□□□□ 0.78
CLDND1-221ENST00000510541 PXMP2Q9NR77 195 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms