RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 PSMD1Q99460 953 aa6.31□□□□□ -1.4
NEK1-204ENST00000509912 USP26Q9BXU7 913 aa6.31□□□□□ -1.4
NEK1-204ENST00000509912 ATP13A2Q9NQ11 1180 aa6.31□□□□□ -1.4
NEK1-204ENST00000509912 NUP98P52948 1817 aa6.31□□□□□ -1.4
NEK1-204ENST00000509912 MAP3K6O95382 1288 aa6.31□□□□□ -1.4
NEK1-204ENST00000509912 MMP10P09238 476 aa6.31□□□□□ -1.4
NEK1-204ENST00000509912 GNPTABQ3T906 1256 aa6.31□□□□□ -1.4
NEK1-204ENST00000509912 CRY2Q49AN0 593 aa6.31□□□□□ -1.4
NEK1-204ENST00000509912 PKDCCQ504Y2 493 aa6.31□□□□□ -1.4
NEK1-204ENST00000509912 DCAF15Q66K64 600 aa6.31□□□□□ -1.4
NEK1-204ENST00000509912 UBE3DQ7Z6J8 389 aa6.31□□□□□ -1.4
NEK1-204ENST00000509912 ATG4CQ96DT6 458 aa6.31□□□□□ -1.4
NEK1-204ENST00000509912 ASAP1Q9ULH1 1129 aa6.31□□□□□ -1.4
NEK1-204ENST00000509912 SLC6A14Q9UN76 642 aa6.31□□□□□ -1.4
NEK1-204ENST00000509912 C9IYK1 514 aa6.3□□□□□ -1.4
NEK1-204ENST00000509912 ADH7P40394 386 aa6.3□□□□□ -1.4
NEK1-204ENST00000509912 CABP4P57796 275 aa6.3□□□□□ -1.4
NEK1-204ENST00000509912 ZNF460Q14592 562 aa6.3□□□□□ -1.4
NEK1-204ENST00000509912 NKG7Q16617 165 aa6.3□□□□□ -1.4
NEK1-204ENST00000509912 SMIM5Q71RC9 77 aa6.3□□□□□ -1.4
NEK1-204ENST00000509912 NIM1KQ8IY84 436 aa6.3□□□□□ -1.4
NEK1-204ENST00000509912 CRAMP1Q96RY5 1269 aa6.3□□□□□ -1.4
NEK1-204ENST00000509912 CYP8B1Q9UNU6 501 aa6.3□□□□□ -1.4
NEK1-204ENST00000509912 STRN3Q13033 797 aa6.3□□□□□ -1.4
NEK1-204ENST00000509912 TCEA2Q15560 299 aa6.3□□□□□ -1.4
NEK1-204ENST00000509912 BRDTQ58F21 947 aaPredicted RBP6.3□□□□□ -1.4
NEK1-204ENST00000509912 THNSL2Q86YJ6 484 aa6.3□□□□□ -1.4
NEK1-204ENST00000509912 KLHL6Q8WZ60 621 aa6.3□□□□□ -1.4
NEK1-204ENST00000509912 FMNL2Q96PY5 1086 aa6.3□□□□□ -1.4
NEK1-204ENST00000509912 BLACEA4D250 179 aa6.3□□□□□ -1.4
NEK1-204ENST00000509912 GFRA2O00451 464 aa6.3□□□□□ -1.4
NEK1-204ENST00000509912 CALD1Q05682 793 aaKnown RBP6.3□□□□□ -1.4
NEK1-204ENST00000509912 SF1Q15637 639 aaKnown RBP6.3□□□□□ -1.4
NEK1-204ENST00000509912 SV2CQ496J9 727 aa6.3□□□□□ -1.4
NEK1-204ENST00000509912 PARP10Q53GL7 1025 aa6.3□□□□□ -1.4
NEK1-204ENST00000509912 REXO1Q8N1G1 1221 aaKnown RBP6.3□□□□□ -1.4
NEK1-204ENST00000509912 TMEM40Q8WWA1 233 aa6.3□□□□□ -1.4
NEK1-204ENST00000509912 KLHDC7BQ96G42 594 aa6.3□□□□□ -1.4
NEK1-204ENST00000509912 NYXQ9GZU5 481 aa6.3□□□□□ -1.4
NEK1-204ENST00000509912 PIM2Q9P1W9 311 aa6.3□□□□□ -1.4
NEK1-204ENST00000509912 A0A087X0B3 334 aa6.29□□□□□ -1.4
NEK1-204ENST00000509912 SLC22A31A6NKX4 558 aa6.29□□□□□ -1.4
NEK1-204ENST00000509912 BMP4P12644 408 aa6.29□□□□□ -1.4
NEK1-204ENST00000509912 SDSP20132 328 aa6.29□□□□□ -1.4
NEK1-204ENST00000509912 MTHFSP49914 203 aa6.29□□□□□ -1.4
NEK1-204ENST00000509912 TARS2Q9BW92 718 aaKnown RBP6.29□□□□□ -1.4
NEK1-204ENST00000509912 ZNF652Q9Y2D9 606 aa6.29□□□□□ -1.4
NEK1-204ENST00000509912 SUSD5O60279 629 aa6.29□□□□□ -1.4
NEK1-204ENST00000509912 EPHX1P07099 455 aa6.29□□□□□ -1.4
NEK1-204ENST00000509912 SNRPBP14678 240 aaKnown RBP6.29□□□□□ -1.4
NEK1-204ENST00000509912 PTPRAP18433 802 aa6.29□□□□□ -1.4
NEK1-204ENST00000509912 ETF1P62495 437 aaKnown RBP6.29□□□□□ -1.4
NEK1-204ENST00000509912 NFKB2Q00653 900 aa6.29□□□□□ -1.4
NEK1-204ENST00000509912 PABPC4Q13310 644 aaKnown RBP eCLIP6.29□□□□□ -1.4
NEK1-204ENST00000509912 HSP90AB3PQ58FF7 597 aa6.29□□□□□ -1.4
NEK1-204ENST00000509912 ZNF530Q6P9A1 599 aaPredicted RBP6.29□□□□□ -1.4
NEK1-204ENST00000509912 NLRC3Q7RTR2 1065 aa6.29□□□□□ -1.4
NEK1-204ENST00000509912 FCHSD1Q86WN1 690 aa6.29□□□□□ -1.4
NEK1-204ENST00000509912 EHMT1Q9H9B1 1298 aa6.29□□□□□ -1.4
NEK1-204ENST00000509912 JPH1Q9HDC5 661 aaPredicted RBP6.29□□□□□ -1.4
NEK1-204ENST00000509912 HOMER2Q9NSB8 354 aa6.29□□□□□ -1.4
NEK1-204ENST00000509912 ATXN7L1Q9ULK2 861 aaPredicted RBP6.29□□□□□ -1.4
NEK1-204ENST00000509912 ARAP2Q8WZ64 1704 aa6.28□□□□□ -1.4
NEK1-204ENST00000509912 ZNF862O60290 1169 aa6.28□□□□□ -1.4
NEK1-204ENST00000509912 TOMM70O94826 608 aa6.28□□□□□ -1.4
NEK1-204ENST00000509912 RFC4P35249 363 aa6.28□□□□□ -1.4
NEK1-204ENST00000509912 CASP7P55210 303 aa6.28□□□□□ -1.4
NEK1-204ENST00000509912 PPFIBP1Q86W92 1011 aa6.28□□□□□ -1.4
NEK1-204ENST00000509912 TRIM22Q8IYM9 498 aa6.28□□□□□ -1.4
NEK1-204ENST00000509912 LEO1Q8WVC0 666 aaPredicted RBP6.28□□□□□ -1.4
NEK1-204ENST00000509912 ELMO3Q96BJ8 720 aa6.28□□□□□ -1.4
NEK1-204ENST00000509912 CCDC136Q96JN2 1154 aa6.28□□□□□ -1.4
NEK1-204ENST00000509912 METTL14Q9HCE5 456 aaKnown RBP6.28□□□□□ -1.4
NEK1-204ENST00000509912 PGRP06401 933 aa6.28□□□□□ -1.4
NEK1-204ENST00000509912 SNRPA1P09661 255 aaKnown RBP6.28□□□□□ -1.4
NEK1-204ENST00000509912 DPEP1P16444 411 aa6.28□□□□□ -1.4
NEK1-204ENST00000509912 GRK4P32298 578 aa6.28□□□□□ -1.4
NEK1-204ENST00000509912 CRKLP46109 303 aaKnown RBP6.28□□□□□ -1.4
NEK1-204ENST00000509912 ARHGAP27Q6ZUM4 889 aa6.28□□□□□ -1.4
NEK1-204ENST00000509912 IL22RA1Q8N6P7 574 aa6.28□□□□□ -1.4
NEK1-204ENST00000509912 CCNFP41002 786 aa6.27□□□□□ -1.41
NEK1-204ENST00000509912 C16orf71Q8IYS4 520 aaPredicted RBP6.27□□□□□ -1.41
NEK1-204ENST00000509912 RTKN2Q8IZC4 609 aa6.27□□□□□ -1.41
NEK1-204ENST00000509912 FBRSQ9HAH7 460 aa6.27□□□□□ -1.41
NEK1-204ENST00000509912 ARHGEF4Q9NR80 690 aa6.27□□□□□ -1.41
NEK1-204ENST00000509912 AAASQ9NRG9 546 aa6.27□□□□□ -1.41
NEK1-204ENST00000509912 TRPM7Q96QT4 1865 aa6.27□□□□□ -1.41
NEK1-204ENST00000509912 A0A0G2JLW4 131 aa6.27□□□□□ -1.41
NEK1-204ENST00000509912 PPP2R1AP30153 589 aa6.27□□□□□ -1.41
NEK1-204ENST00000509912 FKBP1AP62942 108 aaKnown RBP6.27□□□□□ -1.41
NEK1-204ENST00000509912 TAF7Q15545 349 aaPredicted RBP6.27□□□□□ -1.41
NEK1-204ENST00000509912 ZNF468Q5VIY5 522 aaPredicted RBP6.27□□□□□ -1.41
NEK1-204ENST00000509912 ZNF790Q6PG37 636 aa6.27□□□□□ -1.41
NEK1-204ENST00000509912 C15orf52Q6ZUT6 534 aaKnown RBP6.27□□□□□ -1.41
NEK1-204ENST00000509912 EEPD1Q7L9B9 569 aa6.27□□□□□ -1.41
NEK1-204ENST00000509912 SUPT20HQ8NEM7 779 aa6.27□□□□□ -1.41
NEK1-204ENST00000509912 ACSF2Q96CM8 615 aaPredicted RBP6.27□□□□□ -1.41
NEK1-204ENST00000509912 CAMTA2O94983 1202 aa6.27□□□□□ -1.41
NEK1-204ENST00000509912 ZNF853P0CG23 659 aa6.27□□□□□ -1.41
NEK1-204ENST00000509912 NPR1P16066 1061 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms