RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 NPLOC4Q8TAT6 608 aa7.97□□□□□ -1.13
DHFR-204ENST00000508282 FRS2Q8WU20 508 aa7.97□□□□□ -1.13
DHFR-204ENST00000508282 CD320Q9NPF0 282 aa7.97□□□□□ -1.13
DHFR-204ENST00000508282 MBD1Q9UIS9 605 aaPredicted RBP7.97□□□□□ -1.13
DHFR-204ENST00000508282 C7orf72A4D263 438 aa7.96□□□□□ -1.14
DHFR-204ENST00000508282 DBHP09172 617 aa7.96□□□□□ -1.14
DHFR-204ENST00000508282 JAG1P78504 1218 aa7.96□□□□□ -1.14
DHFR-204ENST00000508282 TMEM132EQ6IEE7 984 aa7.96□□□□□ -1.14
DHFR-204ENST00000508282 KRTAP1-3Q8IUG1 177 aa7.96□□□□□ -1.14
DHFR-204ENST00000508282 CKAP2LQ8IYA6 745 aa7.96□□□□□ -1.14
DHFR-204ENST00000508282 MMP19Q99542 508 aa7.96□□□□□ -1.14
DHFR-204ENST00000508282 TRIM55Q9BYV6 548 aa7.96□□□□□ -1.14
DHFR-204ENST00000508282 GULP1Q9UBP9 304 aa7.96□□□□□ -1.14
DHFR-204ENST00000508282 RWDD3Q9Y3V2 267 aa7.96□□□□□ -1.14
DHFR-204ENST00000508282 A0A1W2PQJ5 194 aa7.95□□□□□ -1.14
DHFR-204ENST00000508282 A0A1W2PQU0 124 aa7.95□□□□□ -1.14
DHFR-204ENST00000508282 ARNTLO00327 626 aa7.95□□□□□ -1.14
DHFR-204ENST00000508282 ABLIM1O14639 778 aa7.95□□□□□ -1.14
DHFR-204ENST00000508282 SRGAP3O43295 1099 aa7.95□□□□□ -1.14
DHFR-204ENST00000508282 CYBBP04839 570 aa7.95□□□□□ -1.14
DHFR-204ENST00000508282 SCG5P05408 212 aa7.95□□□□□ -1.14
DHFR-204ENST00000508282 SNRPB2P08579 225 aaKnown RBP7.95□□□□□ -1.14
DHFR-204ENST00000508282 HOXC12P31275 282 aa7.95□□□□□ -1.14
DHFR-204ENST00000508282 GRIA2P42262 883 aa7.95□□□□□ -1.14
DHFR-204ENST00000508282 MTA3Q9BTC8 594 aa7.95□□□□□ -1.14
DHFR-204ENST00000508282 CNTD2Q9H8S5 307 aa7.95□□□□□ -1.14
DHFR-204ENST00000508282 SMG5Q9UPR3 1016 aaKnown RBP7.95□□□□□ -1.14
DHFR-204ENST00000508282 TCAF2A6NFQ2 919 aa7.94□□□□□ -1.14
DHFR-204ENST00000508282 GLI4P10075 376 aa7.94□□□□□ -1.14
DHFR-204ENST00000508282 GTF2F1P35269 517 aaKnown RBP eCLIP7.94□□□□□ -1.14
DHFR-204ENST00000508282 ECI1P42126 302 aa7.94□□□□□ -1.14
DHFR-204ENST00000508282 GFRA1P56159 465 aa7.94□□□□□ -1.14
DHFR-204ENST00000508282 PPP2R2AP63151 447 aa7.94□□□□□ -1.14
DHFR-204ENST00000508282 INF2Q27J81 1249 aa7.94□□□□□ -1.14
DHFR-204ENST00000508282 PRSS53Q2L4Q9 553 aa7.94□□□□□ -1.14
DHFR-204ENST00000508282 PLEKHN1Q494U1 663 aaPredicted RBP7.94□□□□□ -1.14
DHFR-204ENST00000508282 PAQR3Q6TCH7 311 aa7.94□□□□□ -1.14
DHFR-204ENST00000508282 TMC6Q7Z403 805 aa7.94□□□□□ -1.14
DHFR-204ENST00000508282 ANKLE2Q86XL3 938 aa7.94□□□□□ -1.14
DHFR-204ENST00000508282 KREMEN2Q8NCW0 462 aa7.94□□□□□ -1.14
DHFR-204ENST00000508282 SIRT5Q9NXA8 310 aa7.94□□□□□ -1.14
DHFR-204ENST00000508282 TMEFF2Q9UIK5 374 aaPredicted RBP7.94□□□□□ -1.14
DHFR-204ENST00000508282 MSRB2Q9Y3D2 182 aa7.94□□□□□ -1.14
DHFR-204ENST00000508282 NPIPB6E9PJ23 425 aa7.93□□□□□ -1.14
DHFR-204ENST00000508282 AGRPO00253 132 aa7.93□□□□□ -1.14
DHFR-204ENST00000508282 NPHS1O60500 1241 aa7.93□□□□□ -1.14
DHFR-204ENST00000508282 MAPKAPK2P49137 400 aa7.93□□□□□ -1.14
DHFR-204ENST00000508282 EPHB3P54753 998 aa7.93□□□□□ -1.14
DHFR-204ENST00000508282 TMEM62Q0P6H9 643 aa7.93□□□□□ -1.14
DHFR-204ENST00000508282 NR1I3Q14994 352 aa7.93□□□□□ -1.14
DHFR-204ENST00000508282 OLFML2BQ68BL8 750 aa7.93□□□□□ -1.14
DHFR-204ENST00000508282 DENND5AQ6IQ26 1287 aa7.93□□□□□ -1.14
DHFR-204ENST00000508282 CCDC103Q8IW40 242 aa7.93□□□□□ -1.14
DHFR-204ENST00000508282 LZTR1Q8N653 840 aa7.93□□□□□ -1.14
DHFR-204ENST00000508282 TMEM145Q8NBT3 493 aa7.93□□□□□ -1.14
DHFR-204ENST00000508282 DPF3Q92784 378 aa7.93□□□□□ -1.14
DHFR-204ENST00000508282 CCDC140Q96MF4 163 aa7.93□□□□□ -1.14
DHFR-204ENST00000508282 PPP1R1BQ9UD71 204 aaPredicted RBP7.93□□□□□ -1.14
DHFR-204ENST00000508282 HCFC2Q9Y5Z7 792 aa7.93□□□□□ -1.14
DHFR-204ENST00000508282 KCNJ6P48051 423 aa7.92□□□□□ -1.14
DHFR-204ENST00000508282 CDR1P51861 262 aa7.92□□□□□ -1.14
DHFR-204ENST00000508282 KCNA10Q16322 511 aa7.92□□□□□ -1.14
DHFR-204ENST00000508282 ST13P5Q8NFI4 369 aaPredicted RBP7.92□□□□□ -1.14
DHFR-204ENST00000508282 C1orf159Q96HA4 380 aa7.92□□□□□ -1.14
DHFR-204ENST00000508282 ZC3H12DA2A288 527 aaKnown RBP7.91□□□□□ -1.14
DHFR-204ENST00000508282 CPP00450 1065 aa7.91□□□□□ -1.14
DHFR-204ENST00000508282 CFPP27918 469 aa7.91□□□□□ -1.14
DHFR-204ENST00000508282 TESK1Q15569 626 aa7.91□□□□□ -1.14
DHFR-204ENST00000508282 NBPF6Q5VWK0 638 aa7.91□□□□□ -1.14
DHFR-204ENST00000508282 E4F1Q66K89 784 aaPredicted RBP7.91□□□□□ -1.14
DHFR-204ENST00000508282 C1QL4Q86Z23 238 aa7.91□□□□□ -1.14
DHFR-204ENST00000508282 ARMC5Q96C12 935 aa7.91□□□□□ -1.14
DHFR-204ENST00000508282 SGSM3Q96HU1 749 aa7.91□□□□□ -1.14
DHFR-204ENST00000508282 NBPF4Q96M43 638 aa7.91□□□□□ -1.14
DHFR-204ENST00000508282 RXFP1Q9HBX9 757 aa7.91□□□□□ -1.14
DHFR-204ENST00000508282 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.91□□□□□ -1.14
DHFR-204ENST00000508282 F8W031 263 aaPredicted RBP7.9□□□□□ -1.14
DHFR-204ENST00000508282 U2SURPO15042 1029 aaKnown RBP7.9□□□□□ -1.14
DHFR-204ENST00000508282 N4BP3O15049 544 aa7.9□□□□□ -1.14
DHFR-204ENST00000508282 FUCA1P04066 466 aa7.9□□□□□ -1.14
DHFR-204ENST00000508282 LINC00310P59036 64 aa7.9□□□□□ -1.14
DHFR-204ENST00000508282 RBL2Q08999 1139 aa7.9□□□□□ -1.14
DHFR-204ENST00000508282 ACBD5Q5T8D3 534 aaPredicted RBP7.9□□□□□ -1.14
DHFR-204ENST00000508282 IQCEQ6IPM2 695 aa7.9□□□□□ -1.14
DHFR-204ENST00000508282 ZC3H14Q6PJT7 736 aaKnown RBP7.9□□□□□ -1.14
DHFR-204ENST00000508282 LDHDQ86WU2 507 aa7.9□□□□□ -1.14
DHFR-204ENST00000508282 PLEKHO2Q8TD55 490 aa7.9□□□□□ -1.14
DHFR-204ENST00000508282 MZB1Q8WU39 189 aa7.9□□□□□ -1.14
DHFR-204ENST00000508282 DIO2Q92813 273 aa7.9□□□□□ -1.14
DHFR-204ENST00000508282 TOX2Q96NM4 488 aa7.9□□□□□ -1.14
DHFR-204ENST00000508282 ARHGEF4Q9NR80 690 aa7.9□□□□□ -1.14
DHFR-204ENST00000508282 PLA2G2DQ9UNK4 145 aa7.9□□□□□ -1.14
DHFR-204ENST00000508282 MEFVO15553 781 aaPredicted RBP7.89□□□□□ -1.15
DHFR-204ENST00000508282 PRR5P85299 388 aa7.89□□□□□ -1.15
DHFR-204ENST00000508282 FZD5Q13467 585 aa7.89□□□□□ -1.15
DHFR-204ENST00000508282 SSPNQ14714 243 aa7.89□□□□□ -1.15
DHFR-204ENST00000508282 SLC35F1Q5T1Q4 408 aa7.89□□□□□ -1.15
DHFR-204ENST00000508282 CABP7Q86V35 215 aa7.89□□□□□ -1.15
DHFR-204ENST00000508282 IGDCC3Q8IVU1 814 aa7.89□□□□□ -1.15
DHFR-204ENST00000508282 PPIL6Q8IXY8 311 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms