RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 MAGEC2Q9UBF1 373 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P28-201ENST00000507778 CCDC39Q9UFE4 941 aa5.8□□□□□ -1.48
HMGB1P28-201ENST00000507778 MYCLP1P12525 358 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P28-201ENST00000507778 NAT1P18440 290 aa5.79□□□□□ -1.48
HMGB1P28-201ENST00000507778 SDSP20132 328 aa5.79□□□□□ -1.48
HMGB1P28-201ENST00000507778 CD97P48960 835 aa5.79□□□□□ -1.48
HMGB1P28-201ENST00000507778 GPR85P60893 370 aa5.79□□□□□ -1.48
HMGB1P28-201ENST00000507778 DUSP4Q13115 394 aa5.79□□□□□ -1.48
HMGB1P28-201ENST00000507778 LAPTM5Q13571 262 aa5.79□□□□□ -1.48
HMGB1P28-201ENST00000507778 PTPROQ16827 1216 aa5.79□□□□□ -1.48
HMGB1P28-201ENST00000507778 BRAPQ7Z569 592 aa5.79□□□□□ -1.48
HMGB1P28-201ENST00000507778 CPNE8Q86YQ8 564 aa5.79□□□□□ -1.48
HMGB1P28-201ENST00000507778 CCDC103Q8IW40 242 aa5.79□□□□□ -1.48
HMGB1P28-201ENST00000507778 IFNL3Q8IZI9 196 aa5.79□□□□□ -1.48
HMGB1P28-201ENST00000507778 TMEM52Q8NDY8 209 aa5.79□□□□□ -1.48
HMGB1P28-201ENST00000507778 ZCRB1Q8TBF4 217 aaKnown RBP5.79□□□□□ -1.48
HMGB1P28-201ENST00000507778 SLAMF8Q9P0V8 285 aa5.79□□□□□ -1.48
HMGB1P28-201ENST00000507778 TNFRSF10DQ9UBN6 386 aa5.79□□□□□ -1.48
HMGB1P28-201ENST00000507778 ASXL2Q76L83 1435 aa5.79□□□□□ -1.48
HMGB1P28-201ENST00000507778 MYO1BO43795 1136 aa5.78□□□□□ -1.48
HMGB1P28-201ENST00000507778 DNAJC8O75937 253 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P28-201ENST00000507778 LCP1P13796 627 aa5.78□□□□□ -1.48
HMGB1P28-201ENST00000507778 SPINK2P20155 84 aa5.78□□□□□ -1.48
HMGB1P28-201ENST00000507778 IBSPP21815 317 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P28-201ENST00000507778 GUCY1A3Q02108 690 aa5.78□□□□□ -1.48
HMGB1P28-201ENST00000507778 INF2Q27J81 1249 aa5.78□□□□□ -1.48
HMGB1P28-201ENST00000507778 ZNF574Q6ZN55 896 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P28-201ENST00000507778 FGD2Q7Z6J4 655 aa5.78□□□□□ -1.48
HMGB1P28-201ENST00000507778 MTDHQ86UE4 582 aaKnown RBP5.78□□□□□ -1.48
HMGB1P28-201ENST00000507778 JAMLQ86YT9 394 aa5.78□□□□□ -1.48
HMGB1P28-201ENST00000507778 RCBTB1Q8NDN9 531 aa5.78□□□□□ -1.48
HMGB1P28-201ENST00000507778 FLCNQ8NFG4 579 aa5.78□□□□□ -1.48
HMGB1P28-201ENST00000507778 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.78□□□□□ -1.48
HMGB1P28-201ENST00000507778 LINC01599Q8WXQ3 324 aa5.78□□□□□ -1.48
HMGB1P28-201ENST00000507778 SCLYQ96I15 445 aa5.78□□□□□ -1.48
HMGB1P28-201ENST00000507778 MAP6Q96JE9 813 aa5.78□□□□□ -1.48
HMGB1P28-201ENST00000507778 ALPK1Q96QP1 1244 aa5.78□□□□□ -1.48
HMGB1P28-201ENST00000507778 ADAMTS10Q9H324 1103 aa5.78□□□□□ -1.48
HMGB1P28-201ENST00000507778 ANGEL1Q9UNK9 670 aaKnown RBP5.78□□□□□ -1.48
HMGB1P28-201ENST00000507778 PCDHA9Q9Y5H5 950 aa5.78□□□□□ -1.48
HMGB1P28-201ENST00000507778 C7orf72A4D263 438 aa5.77□□□□□ -1.49
HMGB1P28-201ENST00000507778 KIAA1324LA8MWY0 1029 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P28-201ENST00000507778 OPA1O60313 960 aa5.77□□□□□ -1.49
HMGB1P28-201ENST00000507778 NPHS1O60500 1241 aa5.77□□□□□ -1.49
HMGB1P28-201ENST00000507778 PDE8AO60658 829 aa5.77□□□□□ -1.49
HMGB1P28-201ENST00000507778 MSCO60682 206 aa5.77□□□□□ -1.49
HMGB1P28-201ENST00000507778 CRTAMO95727 393 aa5.77□□□□□ -1.49
HMGB1P28-201ENST00000507778 ASLP04424 464 aa5.77□□□□□ -1.49
HMGB1P28-201ENST00000507778 VIL1P09327 827 aaKnown RBP5.77□□□□□ -1.49
HMGB1P28-201ENST00000507778 KIR2DL1P43626 348 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P28-201ENST00000507778 KIR2DL2P43627 348 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P28-201ENST00000507778 RALGPS1Q5JS13 557 aa5.77□□□□□ -1.49
HMGB1P28-201ENST00000507778 MBLAC2Q68D91 279 aa5.77□□□□□ -1.49
HMGB1P28-201ENST00000507778 CNNM4Q6P4Q7 775 aa5.77□□□□□ -1.49
HMGB1P28-201ENST00000507778 LBX2Q6XYB7 198 aa5.77□□□□□ -1.49
HMGB1P28-201ENST00000507778 KRT26Q7Z3Y9 468 aa5.77□□□□□ -1.49
HMGB1P28-201ENST00000507778 LRRTM3Q86VH5 581 aa5.77□□□□□ -1.49
HMGB1P28-201ENST00000507778 WFDC3Q8IUB2 231 aa5.77□□□□□ -1.49
HMGB1P28-201ENST00000507778 CCDC120Q96HB5 630 aa5.77□□□□□ -1.49
HMGB1P28-201ENST00000507778 HHIPL1Q96JK4 782 aa5.77□□□□□ -1.49
HMGB1P28-201ENST00000507778 G6PC3Q9BUM1 346 aa5.77□□□□□ -1.49
HMGB1P28-201ENST00000507778 PCDHA8Q9Y5H6 950 aa5.77□□□□□ -1.49
HMGB1P28-201ENST00000507778 PCDHA2Q9Y5H9 948 aa5.77□□□□□ -1.49
HMGB1P28-201ENST00000507778 TNPO3Q9Y5L0 923 aaKnown RBP5.77□□□□□ -1.49
HMGB1P28-201ENST00000507778 TIMM13Q9Y5L4 95 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P28-201ENST00000507778 A0A087X0B3 334 aa5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 A0A1W2PQ45 241 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 A0A1W2PQY0 241 aa5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 TCRBV16S1A1N1A0A5B0 115 aa5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 FADS2P1A8MWK0 482 aa5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 PPM1GO15355 546 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 RASGRP1O95267 797 aa5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 ZGLP1P0C6A0 271 aa5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 IGFALSP35858 605 aa5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 FLT3P36888 993 aa5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 GTF2A2P52657 109 aa5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 KIZQ2M2Z5 673 aa5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 SLC23A3Q6PIS1 610 aa5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 SPPL2CQ8IUH8 684 aa5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 ANKRD13AQ8IZ07 590 aa5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 ANKS4BQ8N8V4 417 aa5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 PI4K2BQ8TCG2 481 aa5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 CHAC2Q8WUX2 184 aa5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 DDX1Q92499 740 aaKnown RBP5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 GPATCH3Q96I76 525 aa5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 CHAMP1Q96JM3 812 aa5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 ALG1Q9BT22 464 aa5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 TARS2Q9BW92 718 aaKnown RBP5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 BRINP2Q9C0B6 783 aa5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 PAK6Q9NQU5 681 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 EBF1Q9UH73 591 aa5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 TMEM59LQ9UK28 342 aa5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 COL4A3BPQ9Y5P4 624 aa5.76□□□□□ -1.49
HMGB1P28-201ENST00000507778 B4E1Z4 1266 aa5.75□□□□□ -1.49
HMGB1P28-201ENST00000507778 WNT11O96014 354 aa5.75□□□□□ -1.49
HMGB1P28-201ENST00000507778 FUT4P22083 530 aa5.75□□□□□ -1.49
HMGB1P28-201ENST00000507778 CEBPAP49715 358 aaPredicted RBP5.75□□□□□ -1.49
HMGB1P28-201ENST00000507778 NEK4P51957 841 aa5.75□□□□□ -1.49
HMGB1P28-201ENST00000507778 RTP1P59025 263 aa5.75□□□□□ -1.49
HMGB1P28-201ENST00000507778 RPL11P62913 178 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms