RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 C8orf74Q6P047 294 aa19.72■□□□□ 0.75
NUP54-205ENST00000507257 BLIDQ8IZY5 108 aa19.72■□□□□ 0.75
NUP54-205ENST00000507257 OTUD6BQ8N6M0 293 aa19.72■□□□□ 0.75
NUP54-205ENST00000507257 MIGA1Q8NAN2 632 aa19.72■□□□□ 0.75
NUP54-205ENST00000507257 CABLES1Q8TDN4 633 aa19.72■□□□□ 0.75
NUP54-205ENST00000507257 ZIM3Q96PE6 472 aa19.72■□□□□ 0.75
NUP54-205ENST00000507257 RIOK1Q9BRS2 568 aaKnown RBP19.72■□□□□ 0.75
NUP54-205ENST00000507257 NOC4LQ9BVI4 516 aaKnown RBP19.72■□□□□ 0.75
NUP54-205ENST00000507257 EDEM3Q9BZQ6 932 aa19.72■□□□□ 0.75
NUP54-205ENST00000507257 TMOD3Q9NYL9 352 aa19.72■□□□□ 0.75
NUP54-205ENST00000507257 ZNF330Q9Y3S2 320 aaPredicted RBP19.72■□□□□ 0.75
NUP54-205ENST00000507257 CACNA1SQ13698 1873 aa19.72■□□□□ 0.75
NUP54-205ENST00000507257 KIF11P52732 1056 aa19.72■□□□□ 0.75
NUP54-205ENST00000507257 PAK2Q13177 524 aa19.72■□□□□ 0.75
NUP54-205ENST00000507257 FBXW10Q5XX13 1052 aa19.72■□□□□ 0.75
NUP54-205ENST00000507257 EIF1ADQ8N9N8 165 aaKnown RBP19.72■□□□□ 0.75
NUP54-205ENST00000507257 C3orf20Q8ND61 904 aa19.72■□□□□ 0.75
NUP54-205ENST00000507257 HELBQ8NG08 1087 aaPredicted RBP19.72■□□□□ 0.75
NUP54-205ENST00000507257 ARHGAP20Q9P2F6 1191 aa19.72■□□□□ 0.75
NUP54-205ENST00000507257 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.72■□□□□ 0.75
NUP54-205ENST00000507257 NT5C2P49902 561 aa19.71■□□□□ 0.75
NUP54-205ENST00000507257 MMP14P50281 582 aa19.71■□□□□ 0.75
NUP54-205ENST00000507257 NAP1L1P55209 391 aaKnown RBP19.71■□□□□ 0.75
NUP54-205ENST00000507257 AK8Q96MA6 479 aa19.71■□□□□ 0.75
NUP54-205ENST00000507257 PCDHA4Q9UN74 947 aa19.71■□□□□ 0.75
NUP54-205ENST00000507257 SIK3Q9Y2K2 1263 aa19.71■□□□□ 0.75
NUP54-205ENST00000507257 CAPN7Q9Y6W3 813 aa19.71■□□□□ 0.75
NUP54-205ENST00000507257 M0R2N6 131 aa19.7■□□□□ 0.74
NUP54-205ENST00000507257 LSP1P33241 339 aa19.7■□□□□ 0.74
NUP54-205ENST00000507257 UBA7P41226 1012 aa19.7■□□□□ 0.74
NUP54-205ENST00000507257 MTIF2P46199 727 aaKnown RBP19.7■□□□□ 0.74
NUP54-205ENST00000507257 KLK7P49862 253 aa19.7■□□□□ 0.74
NUP54-205ENST00000507257 SKIDA1Q1XH10 827 aa19.7■□□□□ 0.74
NUP54-205ENST00000507257 CFAP221Q4G0U5 840 aa19.7■□□□□ 0.74
NUP54-205ENST00000507257 CFAP58Q5T655 872 aa19.7■□□□□ 0.74
NUP54-205ENST00000507257 GALNT17Q6IS24 598 aa19.7■□□□□ 0.74
NUP54-205ENST00000507257 DAGLBQ8NCG7 672 aa19.7■□□□□ 0.74
NUP54-205ENST00000507257 SDR42E1Q8WUS8 393 aa19.7■□□□□ 0.74
NUP54-205ENST00000507257 C7orf25Q9BPX7 421 aa19.7■□□□□ 0.74
NUP54-205ENST00000507257 CARD10Q9BWT7 1032 aa19.7■□□□□ 0.74
NUP54-205ENST00000507257 BAZ2AQ9UIF9 1905 aaKnown RBP19.7■□□□□ 0.74
NUP54-205ENST00000507257 LAMB1P07942 1786 aa19.7■□□□□ 0.74
NUP54-205ENST00000507257 COL5A2P05997 1499 aaPredicted RBP19.7■□□□□ 0.74
NUP54-205ENST00000507257 SSU72P8A0A1W2PR75 194 aa19.7■□□□□ 0.74
NUP54-205ENST00000507257 GRID2IPA4D2P6 1211 aa19.7■□□□□ 0.74
NUP54-205ENST00000507257 HMGB1P1B2RPK0 211 aaPredicted RBP19.7■□□□□ 0.74
NUP54-205ENST00000507257 MOCS3O95396 460 aa19.7■□□□□ 0.74
NUP54-205ENST00000507257 MAP2K2P36507 400 aa19.7■□□□□ 0.74
NUP54-205ENST00000507257 PDCLQ13371 301 aa19.7■□□□□ 0.74
NUP54-205ENST00000507257 NFRKBQ6P4R8 1299 aa19.7■□□□□ 0.74
NUP54-205ENST00000507257 KRT26Q7Z3Y9 468 aa19.7■□□□□ 0.74
NUP54-205ENST00000507257 CCDC84Q86UT8 332 aaPredicted RBP19.7■□□□□ 0.74
NUP54-205ENST00000507257 WHAMMQ8TF30 809 aa19.7■□□□□ 0.74
NUP54-205ENST00000507257 A0A1B0GUL6 1792 aa19.7■□□□□ 0.74
NUP54-205ENST00000507257 CICQ96RK0 1608 aaPredicted RBP19.7■□□□□ 0.74
NUP54-205ENST00000507257 LOC102724159A0A0B4J2E5 919 aa19.69■□□□□ 0.74
NUP54-205ENST00000507257 PPP1R37O75864 691 aa19.69■□□□□ 0.74
NUP54-205ENST00000507257 PWP2Q15269 919 aaKnown RBP19.69■□□□□ 0.74
NUP54-205ENST00000507257 NAA35Q5VZE5 725 aa19.69■□□□□ 0.74
NUP54-205ENST00000507257 ANKRD40Q6AI12 368 aa19.69■□□□□ 0.74
NUP54-205ENST00000507257 FOXR2Q6PJQ5 311 aa19.69■□□□□ 0.74
NUP54-205ENST00000507257 ADGRA1Q86SQ6 560 aa19.69■□□□□ 0.74
NUP54-205ENST00000507257 ZNF34Q8IZ26 560 aa19.69■□□□□ 0.74
NUP54-205ENST00000507257 PCMTD1Q96MG8 357 aaPredicted RBP19.69■□□□□ 0.74
NUP54-205ENST00000507257 TLR10Q9BXR5 811 aa19.69■□□□□ 0.74
NUP54-205ENST00000507257 MLXIPQ9HAP2 919 aa19.69■□□□□ 0.74
NUP54-205ENST00000507257 SAMM50Q9Y512 469 aa19.69■□□□□ 0.74
NUP54-205ENST00000507257 ZNF804BA4D1E1 1349 aa19.69■□□□□ 0.74
NUP54-205ENST00000507257 RBAK-RBAKDNI3L0D1 243 aa19.68■□□□□ 0.74
NUP54-205ENST00000507257 KIF5BP33176 963 aa19.68■□□□□ 0.74
NUP54-205ENST00000507257 ATP6V1AP38606 617 aa19.68■□□□□ 0.74
NUP54-205ENST00000507257 SLC7A5Q01650 507 aa19.68■□□□□ 0.74
NUP54-205ENST00000507257 ASTE1Q2TB18 679 aaPredicted RBP19.68■□□□□ 0.74
NUP54-205ENST00000507257 TOM1L2Q6ZVM7 507 aa19.68■□□□□ 0.74
NUP54-205ENST00000507257 SMCR8Q8TEV9 937 aaPredicted RBP19.68■□□□□ 0.74
NUP54-205ENST00000507257 TRIM9Q9C026 710 aa19.68■□□□□ 0.74
NUP54-205ENST00000507257 CXorf56Q9H5V9 222 aa19.68■□□□□ 0.74
NUP54-205ENST00000507257 CHRM1P11229 460 aaPredicted RBP19.68■□□□□ 0.74
NUP54-205ENST00000507257 EIF4A3P38919 411 aaKnown RBP19.68■□□□□ 0.74
NUP54-205ENST00000507257 BCAMP50895 628 aa19.68■□□□□ 0.74
NUP54-205ENST00000507257 SMTNP53814 917 aa19.68■□□□□ 0.74
NUP54-205ENST00000507257 PTGISQ16647 500 aa19.68■□□□□ 0.74
NUP54-205ENST00000507257 PPP4R3AQ6IN85 833 aa19.68■□□□□ 0.74
NUP54-205ENST00000507257 CENPPQ6IPU0 288 aa19.68■□□□□ 0.74
NUP54-205ENST00000507257 NOX5Q96PH1 765 aa19.68■□□□□ 0.74
NUP54-205ENST00000507257 FLT1P17948 1338 aa19.67■□□□□ 0.74
NUP54-205ENST00000507257 ZNF233A6NK53 670 aa19.67■□□□□ 0.74
NUP54-205ENST00000507257 PLEKP08567 350 aaPredicted RBP19.67■□□□□ 0.74
NUP54-205ENST00000507257 ATF3P18847 181 aa19.67■□□□□ 0.74
NUP54-205ENST00000507257 NR1D1P20393 614 aa19.67■□□□□ 0.74
NUP54-205ENST00000507257 VWA3BQ502W6 1294 aa19.67■□□□□ 0.74
NUP54-205ENST00000507257 KLHDC7AQ5VTJ3 777 aa19.67■□□□□ 0.74
NUP54-205ENST00000507257 TYW1BQ6NUM6 668 aa19.67■□□□□ 0.74
NUP54-205ENST00000507257 C2CD5Q86YS7 1000 aa19.67■□□□□ 0.74
NUP54-205ENST00000507257 TEX2Q8IWB9 1127 aa19.67■□□□□ 0.74
NUP54-205ENST00000507257 ZNF473Q8WTR7 871 aaKnown RBP19.67■□□□□ 0.74
NUP54-205ENST00000507257 RNPC3Q96LT9 517 aaKnown RBP19.67■□□□□ 0.74
NUP54-205ENST00000507257 VCPKMTQ9H867 229 aa19.67■□□□□ 0.74
NUP54-205ENST00000507257 RBM12Q9NTZ6 932 aaKnown RBP19.67■□□□□ 0.74
NUP54-205ENST00000507257 LAMB2P55268 1798 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms