RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 HEATR3Q7Z4Q2 680 aa14.81□□□□□ -0.04
TCOF1-210ENST00000506767 MCF2L2Q86YR7 1114 aa14.81□□□□□ -0.04
TCOF1-210ENST00000506767 FAM133AQ8N9E0 248 aa14.81□□□□□ -0.04
TCOF1-210ENST00000506767 SHISA4Q96DD7 197 aa14.81□□□□□ -0.04
TCOF1-210ENST00000506767 DIS3Q9Y2L1 958 aaKnown RBP14.81□□□□□ -0.04
TCOF1-210ENST00000506767 PTPN22Q9Y2R2 807 aa14.81□□□□□ -0.04
TCOF1-210ENST00000506767 PLXNA1Q9UIW2 1896 aa14.8□□□□□ -0.04
TCOF1-210ENST00000506767 K7ELQ4 463 aaPredicted RBP14.8□□□□□ -0.04
TCOF1-210ENST00000506767 IGHA2P01877 340 aa14.8□□□□□ -0.04
TCOF1-210ENST00000506767 PGK2P07205 417 aa14.8□□□□□ -0.04
TCOF1-210ENST00000506767 HSD17B4P51659 736 aa14.8□□□□□ -0.04
TCOF1-210ENST00000506767 RPS6P62753 249 aaKnown RBP14.8□□□□□ -0.04
TCOF1-210ENST00000506767 RNF207Q6ZRF8 634 aa14.8□□□□□ -0.04
TCOF1-210ENST00000506767 NPLOC4Q8TAT6 608 aa14.8□□□□□ -0.04
TCOF1-210ENST00000506767 DDX11Q96FC9 970 aa14.8□□□□□ -0.04
TCOF1-210ENST00000506767 FGD4Q96M96 766 aa14.8□□□□□ -0.04
TCOF1-210ENST00000506767 AIFM3Q96NN9 605 aa14.8□□□□□ -0.04
TCOF1-210ENST00000506767 SH3GLB2Q9NR46 395 aa14.8□□□□□ -0.04
TCOF1-210ENST00000506767 ORC3Q9UBD5 711 aaPredicted RBP14.8□□□□□ -0.04
TCOF1-210ENST00000506767 ESYT2A0FGR8 921 aa14.79□□□□□ -0.04
TCOF1-210ENST00000506767 PIK3CDO00329 1044 aa14.79□□□□□ -0.04
TCOF1-210ENST00000506767 MEIS2O14770 477 aa14.79□□□□□ -0.04
TCOF1-210ENST00000506767 CYP2B6P20813 491 aa14.79□□□□□ -0.04
TCOF1-210ENST00000506767 NAPAP54920 295 aa14.79□□□□□ -0.04
TCOF1-210ENST00000506767 CNTN2Q02246 1040 aa14.79□□□□□ -0.04
TCOF1-210ENST00000506767 PKN2Q16513 984 aaKnown RBP14.79□□□□□ -0.04
TCOF1-210ENST00000506767 SLC30A10Q6XR72 485 aa14.79□□□□□ -0.04
TCOF1-210ENST00000506767 DPP9Q86TI2 863 aa14.79□□□□□ -0.04
TCOF1-210ENST00000506767 TEX2Q8IWB9 1127 aa14.79□□□□□ -0.04
TCOF1-210ENST00000506767 FAM177A1Q8N128 213 aaPredicted RBP14.79□□□□□ -0.04
TCOF1-210ENST00000506767 PXYLP1Q8TE99 480 aa14.79□□□□□ -0.04
TCOF1-210ENST00000506767 APBA2Q99767 749 aa14.79□□□□□ -0.04
TCOF1-210ENST00000506767 ZMYND12Q9H0C1 365 aa14.79□□□□□ -0.04
TCOF1-210ENST00000506767 SLC5A4Q9NY91 659 aa14.79□□□□□ -0.04
TCOF1-210ENST00000506767 PTCH2Q9Y6C5 1203 aa14.79□□□□□ -0.04
TCOF1-210ENST00000506767 ASTN1O14525 1302 aa14.78□□□□□ -0.04
TCOF1-210ENST00000506767 SOWAHBA6NEL2 793 aa14.78□□□□□ -0.04
TCOF1-210ENST00000506767 SMCO2A6NFE2 343 aa14.78□□□□□ -0.04
TCOF1-210ENST00000506767 POTEB2H3BUK9 544 aa14.78□□□□□ -0.04
TCOF1-210ENST00000506767 CFBP00751 764 aa14.78□□□□□ -0.04
TCOF1-210ENST00000506767 HMGN5P82970 282 aaKnown RBP14.78□□□□□ -0.04
TCOF1-210ENST00000506767 ZNF467Q7Z7K2 595 aaPredicted RBP14.78□□□□□ -0.04
TCOF1-210ENST00000506767 SYTL5Q8TDW5 730 aaPredicted RBP14.78□□□□□ -0.04
TCOF1-210ENST00000506767 CCDC12Q8WUD4 166 aaPredicted RBP14.78□□□□□ -0.04
TCOF1-210ENST00000506767 WASF1Q92558 559 aa14.78□□□□□ -0.04
TCOF1-210ENST00000506767 MAML3Q96JK9 1138 aa14.78□□□□□ -0.04
TCOF1-210ENST00000506767 PSTPIP2Q9H939 334 aa14.78□□□□□ -0.04
TCOF1-210ENST00000506767 RIC8AQ9NPQ8 531 aa14.78□□□□□ -0.04
TCOF1-210ENST00000506767 VPS54Q9P1Q0 977 aa14.78□□□□□ -0.04
TCOF1-210ENST00000506767 COL20A1Q9P218 1284 aa14.78□□□□□ -0.04
TCOF1-210ENST00000506767 GCOM1H8Y6P7 765 aaPredicted RBP14.77□□□□□ -0.05
TCOF1-210ENST00000506767 ADCY3O60266 1144 aa14.77□□□□□ -0.05
TCOF1-210ENST00000506767 POLR2MP0CAP2 368 aa14.77□□□□□ -0.05
TCOF1-210ENST00000506767 CALML3P27482 149 aa14.77□□□□□ -0.05
TCOF1-210ENST00000506767 CLK2P49760 499 aaKnown RBP14.77□□□□□ -0.05
TCOF1-210ENST00000506767 CCL14Q16627 93 aa14.77□□□□□ -0.05
TCOF1-210ENST00000506767 OLFML2BQ68BL8 750 aa14.77□□□□□ -0.05
TCOF1-210ENST00000506767 FBXO46Q6PJ61 603 aaPredicted RBP14.77□□□□□ -0.05
TCOF1-210ENST00000506767 TRMT44Q8IYL2 757 aaKnown RBP14.77□□□□□ -0.05
TCOF1-210ENST00000506767 CCDC148Q8NFR7 591 aa14.77□□□□□ -0.05
TCOF1-210ENST00000506767 RAET1EQ8TD07 263 aa14.77□□□□□ -0.05
TCOF1-210ENST00000506767 PURBQ96QR8 312 aaKnown RBP14.77□□□□□ -0.05
TCOF1-210ENST00000506767 ALG1Q9BT22 464 aa14.77□□□□□ -0.05
TCOF1-210ENST00000506767 GLT8D2Q9H1C3 349 aa14.77□□□□□ -0.05
TCOF1-210ENST00000506767 FLRT1Q9NZU1 646 aa14.77□□□□□ -0.05
TCOF1-210ENST00000506767 LOC102724159A0A0B4J2E5 919 aa14.76□□□□□ -0.05
TCOF1-210ENST00000506767 HOXA13P31271 388 aaPredicted RBP14.76□□□□□ -0.05
TCOF1-210ENST00000506767 ADCY7P51828 1080 aa14.76□□□□□ -0.05
TCOF1-210ENST00000506767 MRPL12P52815 198 aaKnown RBP14.76□□□□□ -0.05
TCOF1-210ENST00000506767 PWP2Q15269 919 aaKnown RBP14.76□□□□□ -0.05
TCOF1-210ENST00000506767 NPY5RQ15761 445 aa14.76□□□□□ -0.05
TCOF1-210ENST00000506767 USP17L6PQ6QN14 398 aa14.76□□□□□ -0.05
TCOF1-210ENST00000506767 MAMDC4Q6UXC1 1216 aa14.76□□□□□ -0.05
TCOF1-210ENST00000506767 HSCBQ8IWL3 235 aa14.76□□□□□ -0.05
TCOF1-210ENST00000506767 MSL3Q8N5Y2 521 aaKnown RBP14.76□□□□□ -0.05
TCOF1-210ENST00000506767 DNERQ8NFT8 737 aa14.76□□□□□ -0.05
TCOF1-210ENST00000506767 MORC4Q8TE76 937 aa14.76□□□□□ -0.05
TCOF1-210ENST00000506767 TRIB2Q92519 343 aa14.76□□□□□ -0.05
TCOF1-210ENST00000506767 CUL5Q93034 780 aa14.76□□□□□ -0.05
TCOF1-210ENST00000506767 INTS4Q96HW7 963 aaKnown RBP14.76□□□□□ -0.05
TCOF1-210ENST00000506767 TAAR1Q96RJ0 339 aa14.76□□□□□ -0.05
TCOF1-210ENST00000506767 PHF20Q9BVI0 1012 aa14.76□□□□□ -0.05
TCOF1-210ENST00000506767 C6orf50Q9HD87 102 aa14.76□□□□□ -0.05
TCOF1-210ENST00000506767 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.76□□□□□ -0.05
TCOF1-210ENST00000506767 ADAMTS3O15072 1205 aa14.75□□□□□ -0.05
TCOF1-210ENST00000506767 GNA11P29992 359 aa14.75□□□□□ -0.05
TCOF1-210ENST00000506767 ALDH5A1P51649 535 aaPredicted RBP14.75□□□□□ -0.05
TCOF1-210ENST00000506767 DAGLBQ8NCG7 672 aa14.75□□□□□ -0.05
TCOF1-210ENST00000506767 SLAIN1Q8ND83 568 aa14.75□□□□□ -0.05
TCOF1-210ENST00000506767 GJB4Q9NTQ9 266 aa14.75□□□□□ -0.05
TCOF1-210ENST00000506767 ADD3Q9UEY8 706 aaKnown RBP14.75□□□□□ -0.05
TCOF1-210ENST00000506767 FRMPD4Q14CM0 1322 aa14.74□□□□□ -0.05
TCOF1-210ENST00000506767 RPTORQ8N122 1335 aa14.74□□□□□ -0.05
TCOF1-210ENST00000506767 SYNGAP1Q96PV0 1343 aa14.74□□□□□ -0.05
TCOF1-210ENST00000506767 M0R2N6 131 aa14.74□□□□□ -0.05
TCOF1-210ENST00000506767 ELNP15502 786 aa14.74□□□□□ -0.05
TCOF1-210ENST00000506767 XBP1P17861 261 aa14.74□□□□□ -0.05
TCOF1-210ENST00000506767 EDNRBP24530 442 aa14.74□□□□□ -0.05
TCOF1-210ENST00000506767 GJB2P29033 226 aa14.74□□□□□ -0.05
TCOF1-210ENST00000506767 GRK4P32298 578 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms