RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 ZNF804AQ7Z570 1209 aa5.91□□□□□ -1.46
CPNE4-207ENST00000506687 JAMLQ86YT9 394 aa5.91□□□□□ -1.46
CPNE4-207ENST00000506687 AGBL3Q8NEM8 1001 aa5.91□□□□□ -1.46
CPNE4-207ENST00000506687 TRIM56Q9BRZ2 755 aaKnown RBP5.91□□□□□ -1.46
CPNE4-207ENST00000506687 MXD3Q9BW11 206 aa5.91□□□□□ -1.46
CPNE4-207ENST00000506687 SRRTQ9BXP5 876 aaKnown RBP5.91□□□□□ -1.46
CPNE4-207ENST00000506687 RWDD1Q9H446 243 aaPredicted RBP5.91□□□□□ -1.46
CPNE4-207ENST00000506687 IL1RAPL2Q9NP60 686 aa5.91□□□□□ -1.46
CPNE4-207ENST00000506687 TLR7Q9NYK1 1049 aaKnown RBP5.91□□□□□ -1.46
CPNE4-207ENST00000506687 PDS5AQ29RF7 1337 aaKnown RBP5.91□□□□□ -1.46
CPNE4-207ENST00000506687 COL1A1P02452 1464 aaPredicted RBP5.9□□□□□ -1.46
CPNE4-207ENST00000506687 HMGB1P1B2RPK0 211 aaPredicted RBP5.9□□□□□ -1.46
CPNE4-207ENST00000506687 GADD45BO75293 160 aaPredicted RBP5.9□□□□□ -1.46
CPNE4-207ENST00000506687 PPFIA4O75335 1185 aa5.9□□□□□ -1.46
CPNE4-207ENST00000506687 FARP2O94887 1054 aaPredicted RBP5.9□□□□□ -1.46
CPNE4-207ENST00000506687 POLR3DP05423 398 aaPredicted RBP5.9□□□□□ -1.46
CPNE4-207ENST00000506687 GJB1P08034 283 aa5.9□□□□□ -1.46
CPNE4-207ENST00000506687 CDKN1CP49918 316 aaPredicted RBP5.9□□□□□ -1.46
CPNE4-207ENST00000506687 MMP14P50281 582 aa5.9□□□□□ -1.46
CPNE4-207ENST00000506687 WNT7BP56706 349 aa5.9□□□□□ -1.46
CPNE4-207ENST00000506687 SH3BP2P78314 561 aa5.9□□□□□ -1.46
CPNE4-207ENST00000506687 CRHR2Q13324 411 aa5.9□□□□□ -1.46
CPNE4-207ENST00000506687 OS9Q13438 667 aaPredicted RBP5.9□□□□□ -1.46
CPNE4-207ENST00000506687 RASGRF1Q13972 1273 aa5.9□□□□□ -1.46
CPNE4-207ENST00000506687 COL9A2Q14055 689 aaPredicted RBP5.9□□□□□ -1.46
CPNE4-207ENST00000506687 SCARF1Q14162 830 aa5.9□□□□□ -1.46
CPNE4-207ENST00000506687 CCDC85BQ15834 202 aaPredicted RBP5.9□□□□□ -1.46
CPNE4-207ENST00000506687 GRIK5Q16478 980 aa5.9□□□□□ -1.46
CPNE4-207ENST00000506687 KIF4BQ2VIQ3 1234 aa5.9□□□□□ -1.46
CPNE4-207ENST00000506687 BRDTQ58F21 947 aaPredicted RBP5.9□□□□□ -1.46
CPNE4-207ENST00000506687 ZNF697Q5TEC3 545 aa5.9□□□□□ -1.46
CPNE4-207ENST00000506687 SPRYD7Q5W111 196 aa5.9□□□□□ -1.46
CPNE4-207ENST00000506687 OTUD7BQ6GQQ9 843 aa5.9□□□□□ -1.46
CPNE4-207ENST00000506687 CCDC81Q6ZN84 652 aa5.9□□□□□ -1.46
CPNE4-207ENST00000506687 CYP2U1Q7Z449 544 aa5.9□□□□□ -1.46
CPNE4-207ENST00000506687 AACSQ86V21 672 aa5.9□□□□□ -1.46
CPNE4-207ENST00000506687 CLASRPQ8N2M8 674 aaKnown RBP5.9□□□□□ -1.46
CPNE4-207ENST00000506687 ANKK1Q8NFD2 765 aa5.9□□□□□ -1.46
CPNE4-207ENST00000506687 ZBED3Q96IU2 234 aaPredicted RBP5.9□□□□□ -1.46
CPNE4-207ENST00000506687 NEUROD6Q96NK8 337 aa5.9□□□□□ -1.46
CPNE4-207ENST00000506687 TMEM74Q96NL1 305 aa5.9□□□□□ -1.46
CPNE4-207ENST00000506687 CDX2Q99626 313 aaPredicted RBP5.9□□□□□ -1.46
CPNE4-207ENST00000506687 MRIQ9BWK5 157 aa5.9□□□□□ -1.46
CPNE4-207ENST00000506687 LRRCC1Q9C099 1032 aa5.9□□□□□ -1.46
CPNE4-207ENST00000506687 PHACTR1Q9C0D0 580 aa5.9□□□□□ -1.46
CPNE4-207ENST00000506687 CCDC8Q9H0W5 538 aaPredicted RBP5.9□□□□□ -1.46
CPNE4-207ENST00000506687 ZFYVE28Q9HCC9 887 aa5.9□□□□□ -1.46
CPNE4-207ENST00000506687 FAM13BQ9NYF5 915 aa5.9□□□□□ -1.46
CPNE4-207ENST00000506687 HMG20BQ9P0W2 317 aa5.9□□□□□ -1.46
CPNE4-207ENST00000506687 TSR3Q9UJK0 312 aaKnown RBP5.9□□□□□ -1.46
CPNE4-207ENST00000506687 MSRB2Q9Y3D2 182 aa5.9□□□□□ -1.46
CPNE4-207ENST00000506687 SALL3Q9BXA9 1300 aa5.9□□□□□ -1.47
CPNE4-207ENST00000506687 SALL1Q9NSC2 1324 aa5.9□□□□□ -1.47
CPNE4-207ENST00000506687 CACNA1AO00555 2505 aa5.9□□□□□ -1.47
CPNE4-207ENST00000506687 IGF2BP3O00425 579 aaKnown RBP eCLIP5.89□□□□□ -1.47
CPNE4-207ENST00000506687 PDPK1O15530 556 aa5.89□□□□□ -1.47
CPNE4-207ENST00000506687 ADH1BP00325 375 aa5.89□□□□□ -1.47
CPNE4-207ENST00000506687 UQCRFS1P1P0C7P4 283 aa5.89□□□□□ -1.47
CPNE4-207ENST00000506687 CAPN2P17655 700 aa5.89□□□□□ -1.47
CPNE4-207ENST00000506687 MCAMP43121 646 aa5.89□□□□□ -1.47
CPNE4-207ENST00000506687 CAP1Q01518 475 aa5.89□□□□□ -1.47
CPNE4-207ENST00000506687 EXOSC10Q01780 885 aaKnown RBP5.89□□□□□ -1.47
CPNE4-207ENST00000506687 NUCB1Q02818 461 aa5.89□□□□□ -1.47
CPNE4-207ENST00000506687 FAM160A1Q05DH4 1040 aa5.89□□□□□ -1.47
CPNE4-207ENST00000506687 TLR1Q15399 786 aa5.89□□□□□ -1.47
CPNE4-207ENST00000506687 MAP3K11Q16584 847 aa5.89□□□□□ -1.47
CPNE4-207ENST00000506687 C21orf62-AS1Q17RA5 79 aa5.89□□□□□ -1.47
CPNE4-207ENST00000506687 ANGEL2Q5VTE6 544 aaKnown RBP5.89□□□□□ -1.47
CPNE4-207ENST00000506687 ERICH6BQ5W0A0 696 aa5.89□□□□□ -1.47
CPNE4-207ENST00000506687 FBXL19Q6PCT2 694 aa5.89□□□□□ -1.47
CPNE4-207ENST00000506687 TEX2Q8IWB9 1127 aa5.89□□□□□ -1.47
CPNE4-207ENST00000506687 ZNF384Q8TF68 577 aa5.89□□□□□ -1.47
CPNE4-207ENST00000506687 ZDHHC1Q8WTX9 485 aa5.89□□□□□ -1.47
CPNE4-207ENST00000506687 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.89□□□□□ -1.47
CPNE4-207ENST00000506687 NT5C1AQ9BXI3 368 aa5.89□□□□□ -1.47
CPNE4-207ENST00000506687 FAM126AQ9BYI3 521 aaPredicted RBP5.89□□□□□ -1.47
CPNE4-207ENST00000506687 ARHGEF10LQ9HCE6 1279 aa5.89□□□□□ -1.47
CPNE4-207ENST00000506687 GNL3LQ9NVN8 582 aaKnown RBP5.89□□□□□ -1.47
CPNE4-207ENST00000506687 UBP1Q9NZI7 540 aa5.89□□□□□ -1.47
CPNE4-207ENST00000506687 DENND2AQ9ULE3 1009 aa5.89□□□□□ -1.47
CPNE4-207ENST00000506687 POLR2AP24928 1970 aaKnown RBP5.88□□□□□ -1.47
CPNE4-207ENST00000506687 SOWAHBA6NEL2 793 aa5.88□□□□□ -1.47
CPNE4-207ENST00000506687 CYP2E1P05181 493 aaPredicted RBP5.88□□□□□ -1.47
CPNE4-207ENST00000506687 ATP5JP18859 108 aa5.88□□□□□ -1.47
CPNE4-207ENST00000506687 GSTT1P30711 240 aa5.88□□□□□ -1.47
CPNE4-207ENST00000506687 NF2P35240 595 aa5.88□□□□□ -1.47
CPNE4-207ENST00000506687 MAGEA10P43363 369 aaPredicted RBP5.88□□□□□ -1.47
CPNE4-207ENST00000506687 MRE11P49959 708 aa5.88□□□□□ -1.47
CPNE4-207ENST00000506687 PRMT2P55345 433 aa5.88□□□□□ -1.47
CPNE4-207ENST00000506687 ARID5BQ14865 1188 aa5.88□□□□□ -1.47
CPNE4-207ENST00000506687 TEAD4Q15561 434 aa5.88□□□□□ -1.47
CPNE4-207ENST00000506687 DDR2Q16832 855 aa5.88□□□□□ -1.47
CPNE4-207ENST00000506687 FOXD4L6Q3SYB3 417 aaPredicted RBP5.88□□□□□ -1.47
CPNE4-207ENST00000506687 CCDC158Q5M9N0 1113 aa5.88□□□□□ -1.47
CPNE4-207ENST00000506687 MFSD14BQ5SR56 506 aa5.88□□□□□ -1.47
CPNE4-207ENST00000506687 ANKRD45Q5TZF3 282 aa5.88□□□□□ -1.47
CPNE4-207ENST00000506687 PCNX4Q63HM2 1172 aa5.88□□□□□ -1.47
CPNE4-207ENST00000506687 FOXD4L3Q6VB84 417 aaPredicted RBP5.88□□□□□ -1.47
CPNE4-207ENST00000506687 SPATA5Q8NB90 893 aa5.88□□□□□ -1.47
CPNE4-207ENST00000506687 WDR66Q8TBY9 1149 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms