RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 DDX49Q9Y6V7 483 aaKnown RBP14.14□□□□□ -0.15
PDLIM7-214ENST00000505746 SMCHD1A6NHR9 2005 aa14.14□□□□□ -0.15
PDLIM7-214ENST00000505746 LTBP2Q14767 1821 aa14.13□□□□□ -0.15
PDLIM7-214ENST00000505746 ITGA7Q13683 1181 aa14.13□□□□□ -0.15
PDLIM7-214ENST00000505746 DUSP28Q4G0W2 176 aa14.13□□□□□ -0.15
PDLIM7-214ENST00000505746 SLC43A3Q8NBI5 491 aa14.13□□□□□ -0.15
PDLIM7-214ENST00000505746 PNMA1Q8ND90 353 aa14.13□□□□□ -0.15
PDLIM7-214ENST00000505746 RGS22Q8NE09 1264 aa14.13□□□□□ -0.15
PDLIM7-214ENST00000505746 DNERQ8NFT8 737 aa14.13□□□□□ -0.15
PDLIM7-214ENST00000505746 ANKS1AQ92625 1134 aa14.13□□□□□ -0.15
PDLIM7-214ENST00000505746 ZSCAN10Q96SZ4 725 aaPredicted RBP14.13□□□□□ -0.15
PDLIM7-214ENST00000505746 KRT23Q9C075 422 aa14.13□□□□□ -0.15
PDLIM7-214ENST00000505746 MAF1Q9H063 256 aa14.13□□□□□ -0.15
PDLIM7-214ENST00000505746 TMEM265A0A087WTH1 108 aa14.12□□□□□ -0.15
PDLIM7-214ENST00000505746 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.12□□□□□ -0.15
PDLIM7-214ENST00000505746 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.12□□□□□ -0.15
PDLIM7-214ENST00000505746 RBM47A0AV96 593 aaKnown RBP14.12□□□□□ -0.15
PDLIM7-214ENST00000505746 DLL1O00548 723 aa14.12□□□□□ -0.15
PDLIM7-214ENST00000505746 CD4P01730 458 aa14.12□□□□□ -0.15
PDLIM7-214ENST00000505746 GOLGA8HP0CJ92 632 aa14.12□□□□□ -0.15
PDLIM7-214ENST00000505746 RPS6P62753 249 aaKnown RBP14.12□□□□□ -0.15
PDLIM7-214ENST00000505746 PDE4DQ08499 809 aa14.12□□□□□ -0.15
PDLIM7-214ENST00000505746 SLC30A10Q6XR72 485 aa14.12□□□□□ -0.15
PDLIM7-214ENST00000505746 WDR11Q9BZH6 1224 aa14.12□□□□□ -0.15
PDLIM7-214ENST00000505746 CNNM2Q9H8M5 875 aa14.12□□□□□ -0.15
PDLIM7-214ENST00000505746 POLR3EQ9NVU0 708 aa14.12□□□□□ -0.15
PDLIM7-214ENST00000505746 ZSWIM5Q9P217 1185 aa14.12□□□□□ -0.15
PDLIM7-214ENST00000505746 B4E1Z4 1266 aa14.11□□□□□ -0.15
PDLIM7-214ENST00000505746 NKRFO15226 690 aaKnown RBP eCLIP14.11□□□□□ -0.15
PDLIM7-214ENST00000505746 CPT1AP50416 773 aa14.11□□□□□ -0.15
PDLIM7-214ENST00000505746 ASPRV1Q53RT3 343 aa14.11□□□□□ -0.15
PDLIM7-214ENST00000505746 BRDTQ58F21 947 aaPredicted RBP14.11□□□□□ -0.15
PDLIM7-214ENST00000505746 CDX2Q99626 313 aaPredicted RBP14.11□□□□□ -0.15
PDLIM7-214ENST00000505746 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.11□□□□□ -0.15
PDLIM7-214ENST00000505746 UBAC1Q9BSL1 405 aa14.11□□□□□ -0.15
PDLIM7-214ENST00000505746 PPP1R12CQ9BZL4 782 aa14.11□□□□□ -0.15
PDLIM7-214ENST00000505746 UBA5Q9GZZ9 404 aa14.11□□□□□ -0.15
PDLIM7-214ENST00000505746 GPHNQ9NQX3 736 aaPredicted RBP14.11□□□□□ -0.15
PDLIM7-214ENST00000505746 SUPT16HQ9Y5B9 1047 aaKnown RBP14.11□□□□□ -0.15
PDLIM7-214ENST00000505746 CSF2RAP15509 400 aa14.1□□□□□ -0.15
PDLIM7-214ENST00000505746 PTGS1P23219 599 aa14.1□□□□□ -0.15
PDLIM7-214ENST00000505746 EDNRBP24530 442 aa14.1□□□□□ -0.15
PDLIM7-214ENST00000505746 CDC37Q16543 378 aaPredicted RBP14.1□□□□□ -0.15
PDLIM7-214ENST00000505746 USH1GQ495M9 461 aa14.1□□□□□ -0.15
PDLIM7-214ENST00000505746 TMEM240Q5SV17 173 aa14.1□□□□□ -0.15
PDLIM7-214ENST00000505746 TMEM63BQ5T3F8 832 aa14.1□□□□□ -0.15
PDLIM7-214ENST00000505746 PSRC1Q6PGN9 363 aaPredicted RBP14.1□□□□□ -0.15
PDLIM7-214ENST00000505746 ADGRF4Q8IZF3 695 aa14.1□□□□□ -0.15
PDLIM7-214ENST00000505746 ENAHQ8N8S7 591 aaPredicted RBP14.1□□□□□ -0.15
PDLIM7-214ENST00000505746 OR6J1Q8NGC5 347 aa14.1□□□□□ -0.15
PDLIM7-214ENST00000505746 SCFD2Q8WU76 684 aa14.1□□□□□ -0.15
PDLIM7-214ENST00000505746 HIPK3Q9H422 1215 aa14.1□□□□□ -0.15
PDLIM7-214ENST00000505746 GRIN2DO15399 1336 aa14.1□□□□□ -0.15
PDLIM7-214ENST00000505746 TNKSO95271 1327 aa14.1□□□□□ -0.15
PDLIM7-214ENST00000505746 ABCB11O95342 1321 aa14.1□□□□□ -0.15
PDLIM7-214ENST00000505746 RAD50Q92878 1312 aa14.1□□□□□ -0.15
PDLIM7-214ENST00000505746 DHX16O60231 1041 aaKnown RBP14.09□□□□□ -0.15
PDLIM7-214ENST00000505746 KPNA6O60684 536 aa14.09□□□□□ -0.15
PDLIM7-214ENST00000505746 PARP1P09874 1014 aaKnown RBP14.09□□□□□ -0.15
PDLIM7-214ENST00000505746 CYP2C18P33260 490 aa14.09□□□□□ -0.15
PDLIM7-214ENST00000505746 PSMC6P62333 389 aa14.09□□□□□ -0.15
PDLIM7-214ENST00000505746 PPP2R5BQ15173 497 aa14.09□□□□□ -0.15
PDLIM7-214ENST00000505746 C16orf59Q7L2K0 433 aa14.09□□□□□ -0.15
PDLIM7-214ENST00000505746 MCF2L2Q86YR7 1114 aa14.09□□□□□ -0.15
PDLIM7-214ENST00000505746 RUFY2Q8WXA3 655 aa14.09□□□□□ -0.15
PDLIM7-214ENST00000505746 MTIF3Q9H2K0 278 aaKnown RBP14.09□□□□□ -0.15
PDLIM7-214ENST00000505746 TTYH1Q9H313 450 aaPredicted RBP14.09□□□□□ -0.15
PDLIM7-214ENST00000505746 CPVLQ9H3G5 476 aa14.09□□□□□ -0.15
PDLIM7-214ENST00000505746 IL23AQ9NPF7 189 aa14.09□□□□□ -0.15
PDLIM7-214ENST00000505746 B4GALT4O60513 344 aa14.08□□□□□ -0.16
PDLIM7-214ENST00000505746 MYL3P08590 195 aa14.08□□□□□ -0.16
PDLIM7-214ENST00000505746 SUPT20HL2P0C7V6 817 aa14.08□□□□□ -0.16
PDLIM7-214ENST00000505746 DNAJB2P25686 324 aa14.08□□□□□ -0.16
PDLIM7-214ENST00000505746 PURAQ00577 322 aaKnown RBP14.08□□□□□ -0.16
PDLIM7-214ENST00000505746 TRDNQ13061 729 aa14.08□□□□□ -0.16
PDLIM7-214ENST00000505746 IFIT1BQ5T764 474 aaKnown RBP14.08□□□□□ -0.16
PDLIM7-214ENST00000505746 TTC22Q5TAA0 569 aa14.08□□□□□ -0.16
PDLIM7-214ENST00000505746 ZNF365Q70YC5 407 aa14.08□□□□□ -0.16
PDLIM7-214ENST00000505746 MTG1Q9BT17 334 aaPredicted RBP14.08□□□□□ -0.16
PDLIM7-214ENST00000505746 TRPV6Q9H1D0 765 aa14.08□□□□□ -0.16
PDLIM7-214ENST00000505746 MRPL11Q9Y3B7 192 aaKnown RBP14.08□□□□□ -0.16
PDLIM7-214ENST00000505746 COL6A3P12111 3177 aa14.07□□□□□ -0.16
PDLIM7-214ENST00000505746 FGBP02675 491 aa14.07□□□□□ -0.16
PDLIM7-214ENST00000505746 ACRP10323 421 aa14.07□□□□□ -0.16
PDLIM7-214ENST00000505746 TXNP10599 105 aaKnown RBP14.07□□□□□ -0.16
PDLIM7-214ENST00000505746 PDE4AP27815 886 aa14.07□□□□□ -0.16
PDLIM7-214ENST00000505746 TTLL4Q14679 1199 aa14.07□□□□□ -0.16
PDLIM7-214ENST00000505746 QRICH1Q2TAL8 776 aa14.07□□□□□ -0.16
PDLIM7-214ENST00000505746 RASIP1Q5U651 963 aa14.07□□□□□ -0.16
PDLIM7-214ENST00000505746 FBXO11Q86XK2 927 aa14.07□□□□□ -0.16
PDLIM7-214ENST00000505746 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.07□□□□□ -0.16
PDLIM7-214ENST00000505746 RPUSD2Q8IZ73 545 aaKnown RBP14.07□□□□□ -0.16
PDLIM7-214ENST00000505746 NSUN6Q8TEA1 469 aaKnown RBP14.07□□□□□ -0.16
PDLIM7-214ENST00000505746 MYLIPQ8WY64 445 aa14.07□□□□□ -0.16
PDLIM7-214ENST00000505746 TIFAQ96CG3 184 aa14.07□□□□□ -0.16
PDLIM7-214ENST00000505746 NOC4LQ9BVI4 516 aaKnown RBP14.07□□□□□ -0.16
PDLIM7-214ENST00000505746 ALDH8A1Q9H2A2 487 aaPredicted RBP14.07□□□□□ -0.16
PDLIM7-214ENST00000505746 JMJD4Q9H9V9 463 aa14.07□□□□□ -0.16
PDLIM7-214ENST00000505746 VAT1LQ9HCJ6 419 aa14.07□□□□□ -0.16
PDLIM7-214ENST00000505746 A6NJR5 290 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms