RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 ASTN1O14525 1302 aa11.73□□□□□ -0.53
NEDD9-210ENST00000505589 GRIN2DO15399 1336 aa11.73□□□□□ -0.53
NEDD9-210ENST00000505589 GPAA1O43292 621 aa11.73□□□□□ -0.53
NEDD9-210ENST00000505589 TLL1O43897 1013 aa11.73□□□□□ -0.53
NEDD9-210ENST00000505589 EFCAB14O75071 495 aa11.73□□□□□ -0.53
NEDD9-210ENST00000505589 CA3P07451 260 aa11.73□□□□□ -0.53
NEDD9-210ENST00000505589 TFAP4Q01664 338 aa11.73□□□□□ -0.53
NEDD9-210ENST00000505589 SLFNL1Q499Z3 407 aa11.73□□□□□ -0.53
NEDD9-210ENST00000505589 DEFB128Q7Z7B8 93 aa11.73□□□□□ -0.53
NEDD9-210ENST00000505589 LRRC47Q8N1G4 583 aaKnown RBP11.73□□□□□ -0.53
NEDD9-210ENST00000505589 PANK1Q8TE04 598 aa11.73□□□□□ -0.53
NEDD9-210ENST00000505589 SCLYQ96I15 445 aa11.73□□□□□ -0.53
NEDD9-210ENST00000505589 NAPBQ9H115 298 aa11.73□□□□□ -0.53
NEDD9-210ENST00000505589 WNT8AQ9H1J5 351 aa11.73□□□□□ -0.53
NEDD9-210ENST00000505589 BAZ2AQ9UIF9 1905 aaKnown RBP11.73□□□□□ -0.53
NEDD9-210ENST00000505589 STX8Q9UNK0 236 aa11.73□□□□□ -0.53
NEDD9-210ENST00000505589 NCOR1O75376 2440 aa11.72□□□□□ -0.53
NEDD9-210ENST00000505589 UMODL1Q5DID0 1318 aa11.72□□□□□ -0.53
NEDD9-210ENST00000505589 TSPY2A6NKD2 308 aa11.72□□□□□ -0.53
NEDD9-210ENST00000505589 ICAM1P05362 532 aa11.72□□□□□ -0.53
NEDD9-210ENST00000505589 MYL3P08590 195 aa11.72□□□□□ -0.53
NEDD9-210ENST00000505589 IQCF3P0C7M6 154 aa11.72□□□□□ -0.53
NEDD9-210ENST00000505589 MCCP23508 829 aa11.72□□□□□ -0.53
NEDD9-210ENST00000505589 PURAQ00577 322 aaKnown RBP11.72□□□□□ -0.53
NEDD9-210ENST00000505589 TFF2Q03403 129 aa11.72□□□□□ -0.53
NEDD9-210ENST00000505589 FAM47CQ5HY64 1035 aa11.72□□□□□ -0.53
NEDD9-210ENST00000505589 NSMFQ6X4W1 530 aa11.72□□□□□ -0.53
NEDD9-210ENST00000505589 EEPD1Q7L9B9 569 aa11.72□□□□□ -0.53
NEDD9-210ENST00000505589 CAGE1Q8TC20 777 aa11.72□□□□□ -0.53
NEDD9-210ENST00000505589 ARNTL2Q8WYA1 636 aa11.72□□□□□ -0.53
NEDD9-210ENST00000505589 ZBED2Q9BTP6 218 aa11.72□□□□□ -0.53
NEDD9-210ENST00000505589 CTNNA3Q9UI47 895 aa11.72□□□□□ -0.53
NEDD9-210ENST00000505589 CCPG1Q9ULG6 757 aa11.72□□□□□ -0.53
NEDD9-210ENST00000505589 XIRP2A4UGR9 3374 aa11.71□□□□□ -0.53
NEDD9-210ENST00000505589 ZNF536O15090 1300 aa11.71□□□□□ -0.53
NEDD9-210ENST00000505589 RBM47A0AV96 593 aaKnown RBP11.71□□□□□ -0.53
NEDD9-210ENST00000505589 PRDM1O75626 825 aa11.71□□□□□ -0.53
NEDD9-210ENST00000505589 MYOGP15173 224 aa11.71□□□□□ -0.53
NEDD9-210ENST00000505589 KCNQ1P51787 676 aa11.71□□□□□ -0.53
NEDD9-210ENST00000505589 PSMC6P62333 389 aa11.71□□□□□ -0.53
NEDD9-210ENST00000505589 HNRNPUQ00839 825 aaKnown RBP eCLIP11.71□□□□□ -0.53
NEDD9-210ENST00000505589 TTLL4Q14679 1199 aa11.71□□□□□ -0.53
NEDD9-210ENST00000505589 PUS10Q3MIT2 529 aaKnown RBP11.71□□□□□ -0.53
NEDD9-210ENST00000505589 HERC6Q8IVU3 1022 aa11.71□□□□□ -0.53
NEDD9-210ENST00000505589 FBXO16Q8IX29 292 aaPredicted RBP11.71□□□□□ -0.53
NEDD9-210ENST00000505589 DNERQ8NFT8 737 aa11.71□□□□□ -0.53
NEDD9-210ENST00000505589 OR6J1Q8NGC5 347 aa11.71□□□□□ -0.53
NEDD9-210ENST00000505589 SCFD2Q8WU76 684 aa11.71□□□□□ -0.53
NEDD9-210ENST00000505589 OSBP2Q969R2 916 aa11.71□□□□□ -0.53
NEDD9-210ENST00000505589 PDGFCQ9NRA1 345 aa11.71□□□□□ -0.53
NEDD9-210ENST00000505589 TRMT13Q9NUP7 481 aaKnown RBP11.71□□□□□ -0.53
NEDD9-210ENST00000505589 RAPGEFL1Q9UHV5 662 aa11.71□□□□□ -0.53
NEDD9-210ENST00000505589 PRR12Q9ULL5 1215 aa11.71□□□□□ -0.53
NEDD9-210ENST00000505589 PLIN4Q96Q06 1357 aa11.7□□□□□ -0.54
NEDD9-210ENST00000505589 PI4K2BG5E9Z4 385 aa11.7□□□□□ -0.54
NEDD9-210ENST00000505589 CYP2C9P11712 490 aa11.7□□□□□ -0.54
NEDD9-210ENST00000505589 ALADP13716 330 aa11.7□□□□□ -0.54
NEDD9-210ENST00000505589 TAP1Q03518 808 aa11.7□□□□□ -0.54
NEDD9-210ENST00000505589 PDE4DQ08499 809 aa11.7□□□□□ -0.54
NEDD9-210ENST00000505589 PPP2R5BQ15173 497 aa11.7□□□□□ -0.54
NEDD9-210ENST00000505589 NBPF20Q3BBV1 942 aa11.7□□□□□ -0.54
NEDD9-210ENST00000505589 KCTD1Q719H9 257 aa11.7□□□□□ -0.54
NEDD9-210ENST00000505589 SIRT2Q8IXJ6 389 aa11.7□□□□□ -0.54
NEDD9-210ENST00000505589 AFAP1L1Q8TED9 768 aa11.7□□□□□ -0.54
NEDD9-210ENST00000505589 DCAF4Q8WV16 495 aa11.7□□□□□ -0.54
NEDD9-210ENST00000505589 EPHX3Q9H6B9 360 aa11.7□□□□□ -0.54
NEDD9-210ENST00000505589 FAM50BQ9Y247 325 aa11.7□□□□□ -0.54
NEDD9-210ENST00000505589 ABHD14A-ACY1A0A1B0GW23 586 aa11.69□□□□□ -0.54
NEDD9-210ENST00000505589 PTPDC1A2A3K4 754 aa11.69□□□□□ -0.54
NEDD9-210ENST00000505589 A6NJR5 290 aa11.69□□□□□ -0.54
NEDD9-210ENST00000505589 PRR33A8MZF0 331 aa11.69□□□□□ -0.54
NEDD9-210ENST00000505589 ALDH5A1P51649 535 aaPredicted RBP11.69□□□□□ -0.54
NEDD9-210ENST00000505589 PPARAQ07869 468 aa11.69□□□□□ -0.54
NEDD9-210ENST00000505589 BAATQ14032 418 aaPredicted RBP11.69□□□□□ -0.54
NEDD9-210ENST00000505589 NECAB3Q96P71 396 aaPredicted RBP11.69□□□□□ -0.54
NEDD9-210ENST00000505589 CRBNQ96SW2 442 aa11.69□□□□□ -0.54
NEDD9-210ENST00000505589 RAD9AQ99638 391 aa11.69□□□□□ -0.54
NEDD9-210ENST00000505589 KCNH6Q9H252 994 aa11.69□□□□□ -0.54
NEDD9-210ENST00000505589 CERS4Q9HA82 394 aa11.69□□□□□ -0.54
NEDD9-210ENST00000505589 TCF20Q9UGU0 1960 aaKnown RBP11.68□□□□□ -0.54
NEDD9-210ENST00000505589 RFXAPO00287 272 aa11.68□□□□□ -0.54
NEDD9-210ENST00000505589 CASTP20810 708 aaKnown RBP11.68□□□□□ -0.54
NEDD9-210ENST00000505589 GRB10Q13322 594 aa11.68□□□□□ -0.54
NEDD9-210ENST00000505589 IKBKEQ14164 716 aa11.68□□□□□ -0.54
NEDD9-210ENST00000505589 PTGISQ16647 500 aa11.68□□□□□ -0.54
NEDD9-210ENST00000505589 BTNL9Q6UXG8 535 aa11.68□□□□□ -0.54
NEDD9-210ENST00000505589 RNF207Q6ZRF8 634 aa11.68□□□□□ -0.54
NEDD9-210ENST00000505589 RGS22Q8NE09 1264 aa11.68□□□□□ -0.54
NEDD9-210ENST00000505589 TGS1Q96RS0 853 aaKnown RBP11.68□□□□□ -0.54
NEDD9-210ENST00000505589 KATNAL1Q9BW62 490 aa11.68□□□□□ -0.54
NEDD9-210ENST00000505589 RANBP17Q9H2T7 1088 aaKnown RBP11.68□□□□□ -0.54
NEDD9-210ENST00000505589 GREB1LQ9C091 1923 aaPredicted RBP11.68□□□□□ -0.54
NEDD9-210ENST00000505589 TTC41PQ6P2S7 1318 aa11.67□□□□□ -0.54
NEDD9-210ENST00000505589 MYH4Q9Y623 1939 aa11.67□□□□□ -0.54
NEDD9-210ENST00000505589 CHGBP05060 677 aa11.67□□□□□ -0.54
NEDD9-210ENST00000505589 TXNP10599 105 aaKnown RBP11.67□□□□□ -0.54
NEDD9-210ENST00000505589 NT5C2P49902 561 aa11.67□□□□□ -0.54
NEDD9-210ENST00000505589 CSPP1Q1MSJ5 1256 aa11.67□□□□□ -0.54
NEDD9-210ENST00000505589 CCDC96Q2M329 555 aa11.67□□□□□ -0.54
NEDD9-210ENST00000505589 MUM1L1Q5H9M0 696 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms