RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 STRNO43815 780 aa11.78□□□□□ -0.52
RFC1-210ENST00000505077 PPFIA3O75145 1194 aa11.78□□□□□ -0.52
RFC1-210ENST00000505077 ERCC3P19447 782 aa11.78□□□□□ -0.52
RFC1-210ENST00000505077 HSD17B4P51659 736 aa11.78□□□□□ -0.52
RFC1-210ENST00000505077 AP3B2Q13367 1082 aa11.78□□□□□ -0.52
RFC1-210ENST00000505077 IFFO2Q5TF58 517 aa11.78□□□□□ -0.52
RFC1-210ENST00000505077 KRT40Q6A162 431 aa11.78□□□□□ -0.52
RFC1-210ENST00000505077 TYW1BQ6NUM6 668 aa11.78□□□□□ -0.52
RFC1-210ENST00000505077 NCAPG2Q86XI2 1143 aa11.78□□□□□ -0.52
RFC1-210ENST00000505077 COA7Q96BR5 231 aa11.78□□□□□ -0.52
RFC1-210ENST00000505077 PSTPIP2Q9H939 334 aa11.78□□□□□ -0.52
RFC1-210ENST00000505077 HOMER2Q9NSB8 354 aa11.78□□□□□ -0.52
RFC1-210ENST00000505077 CPA4Q9UI42 421 aa11.78□□□□□ -0.52
RFC1-210ENST00000505077 PCDHA4Q9UN74 947 aa11.78□□□□□ -0.52
RFC1-210ENST00000505077 IVNS1ABPQ9Y6Y0 642 aa11.78□□□□□ -0.52
RFC1-210ENST00000505077 LOC102724159A0A0B4J2E5 919 aa11.77□□□□□ -0.53
RFC1-210ENST00000505077 SMCO2A6NFE2 343 aa11.77□□□□□ -0.53
RFC1-210ENST00000505077 GCOM1H8Y6P7 765 aaPredicted RBP11.77□□□□□ -0.53
RFC1-210ENST00000505077 TRPA1O75762 1119 aa11.77□□□□□ -0.53
RFC1-210ENST00000505077 FOSP01100 380 aaPredicted RBP11.77□□□□□ -0.53
RFC1-210ENST00000505077 POLR2MP0CAP2 368 aa11.77□□□□□ -0.53
RFC1-210ENST00000505077 SYT1P21579 422 aa11.77□□□□□ -0.53
RFC1-210ENST00000505077 KRT2P35908 639 aa11.77□□□□□ -0.53
RFC1-210ENST00000505077 NLRP5P59047 1200 aa11.77□□□□□ -0.53
RFC1-210ENST00000505077 C1QBPQ07021 282 aaKnown RBP11.77□□□□□ -0.53
RFC1-210ENST00000505077 KCTD2Q14681 263 aa11.77□□□□□ -0.53
RFC1-210ENST00000505077 PWP2Q15269 919 aaKnown RBP11.77□□□□□ -0.53
RFC1-210ENST00000505077 SOCS4Q8WXH5 440 aa11.77□□□□□ -0.53
RFC1-210ENST00000505077 CLEC4DQ8WXI8 215 aa11.77□□□□□ -0.53
RFC1-210ENST00000505077 AIFM3Q96NN9 605 aa11.77□□□□□ -0.53
RFC1-210ENST00000505077 FOXP1Q9H334 677 aaPredicted RBP11.77□□□□□ -0.53
RFC1-210ENST00000505077 RIPK3Q9Y572 518 aa11.77□□□□□ -0.53
RFC1-210ENST00000505077 NFIBO00712 420 aa11.76□□□□□ -0.53
RFC1-210ENST00000505077 OPLAHO14841 1288 aa11.76□□□□□ -0.53
RFC1-210ENST00000505077 STX6O43752 255 aa11.76□□□□□ -0.53
RFC1-210ENST00000505077 GTPBP6O43824 516 aaPredicted RBP11.76□□□□□ -0.53
RFC1-210ENST00000505077 GNRH1P01148 92 aa11.76□□□□□ -0.53
RFC1-210ENST00000505077 FCER1AP12319 257 aa11.76□□□□□ -0.53
RFC1-210ENST00000505077 LACTBP83111 547 aaPredicted RBP11.76□□□□□ -0.53
RFC1-210ENST00000505077 SP3Q02447 781 aa11.76□□□□□ -0.53
RFC1-210ENST00000505077 KIF22Q14807 665 aa11.76□□□□□ -0.53
RFC1-210ENST00000505077 ARHGEF6Q15052 776 aa11.76□□□□□ -0.53
RFC1-210ENST00000505077 RNF207Q6ZRF8 634 aa11.76□□□□□ -0.53
RFC1-210ENST00000505077 BLIDQ8IZY5 108 aa11.76□□□□□ -0.53
RFC1-210ENST00000505077 ANKRD35Q8N283 1001 aa11.76□□□□□ -0.53
RFC1-210ENST00000505077 JMYQ8N9B5 988 aa11.76□□□□□ -0.53
RFC1-210ENST00000505077 RNF25Q96BH1 459 aaPredicted RBP11.76□□□□□ -0.53
RFC1-210ENST00000505077 PORCNQ9H237 461 aa11.76□□□□□ -0.53
RFC1-210ENST00000505077 EHMT1Q9H9B1 1298 aa11.76□□□□□ -0.53
RFC1-210ENST00000505077 A1CFQ9NQ94 594 aaKnown RBP11.76□□□□□ -0.53
RFC1-210ENST00000505077 WBP1LQ9NX94 342 aa11.76□□□□□ -0.53
RFC1-210ENST00000505077 DOCK5Q9H7D0 1870 aa11.76□□□□□ -0.53
RFC1-210ENST00000505077 LOXHD1Q8IVV2 1947 aa11.76□□□□□ -0.53
RFC1-210ENST00000505077 FRMPD3Q5JV73 1810 aa11.75□□□□□ -0.53
RFC1-210ENST00000505077 SLC15A5A6NIM6 579 aa11.75□□□□□ -0.53
RFC1-210ENST00000505077 SPDYE3A6NKU9 549 aa11.75□□□□□ -0.53
RFC1-210ENST00000505077 MEIS2O14770 477 aa11.75□□□□□ -0.53
RFC1-210ENST00000505077 CFBP00751 764 aa11.75□□□□□ -0.53
RFC1-210ENST00000505077 U2AF2P26368 475 aaKnown RBP eCLIP11.75□□□□□ -0.53
RFC1-210ENST00000505077 DDIT3P35638 169 aa11.75□□□□□ -0.53
RFC1-210ENST00000505077 CLK2P49760 499 aaKnown RBP11.75□□□□□ -0.53
RFC1-210ENST00000505077 FCGRTP55899 365 aa11.75□□□□□ -0.53
RFC1-210ENST00000505077 RPS6P62753 249 aaKnown RBP11.75□□□□□ -0.53
RFC1-210ENST00000505077 NUCB2P80303 420 aa11.75□□□□□ -0.53
RFC1-210ENST00000505077 GNL2Q13823 731 aaKnown RBP11.75□□□□□ -0.53
RFC1-210ENST00000505077 GRB14Q14449 540 aa11.75□□□□□ -0.53
RFC1-210ENST00000505077 NPY5RQ15761 445 aa11.75□□□□□ -0.53
RFC1-210ENST00000505077 Q3C1V9 767 aa11.75□□□□□ -0.53
RFC1-210ENST00000505077 MUM1L1Q5H9M0 696 aa11.75□□□□□ -0.53
RFC1-210ENST00000505077 KRT25Q7Z3Z0 450 aa11.75□□□□□ -0.53
RFC1-210ENST00000505077 BRAPQ7Z569 592 aa11.75□□□□□ -0.53
RFC1-210ENST00000505077 GPR142Q7Z601 462 aa11.75□□□□□ -0.53
RFC1-210ENST00000505077 PLEKHH3Q7Z736 793 aa11.75□□□□□ -0.53
RFC1-210ENST00000505077 DIS3L2Q8IYB7 885 aaKnown RBP11.75□□□□□ -0.53
RFC1-210ENST00000505077 DNERQ8NFT8 737 aa11.75□□□□□ -0.53
RFC1-210ENST00000505077 SHISA4Q96DD7 197 aa11.75□□□□□ -0.53
RFC1-210ENST00000505077 ERO1AQ96HE7 468 aa11.75□□□□□ -0.53
RFC1-210ENST00000505077 MMP19Q99542 508 aa11.75□□□□□ -0.53
RFC1-210ENST00000505077 MPHOSPH6Q99547 160 aaKnown RBP11.75□□□□□ -0.53
RFC1-210ENST00000505077 SLC5A4Q9NY91 659 aa11.75□□□□□ -0.53
RFC1-210ENST00000505077 CYP39A1Q9NYL5 469 aa11.75□□□□□ -0.53
RFC1-210ENST00000505077 ADD3Q9UEY8 706 aaKnown RBP11.75□□□□□ -0.53
RFC1-210ENST00000505077 MYH9P35579 1960 aaKnown RBP11.75□□□□□ -0.53
RFC1-210ENST00000505077 FRMPD4Q14CM0 1322 aa11.75□□□□□ -0.53
RFC1-210ENST00000505077 DNAJC25-GNG10A0A024R161 153 aa11.74□□□□□ -0.53
RFC1-210ENST00000505077 VPS37CA5D8V6 355 aaPredicted RBP11.74□□□□□ -0.53
RFC1-210ENST00000505077 B4DLN1 442 aa11.74□□□□□ -0.53
RFC1-210ENST00000505077 M0R2N6 131 aa11.74□□□□□ -0.53
RFC1-210ENST00000505077 GPR25O00155 361 aa11.74□□□□□ -0.53
RFC1-210ENST00000505077 TNPO2O14787 897 aaKnown RBP11.74□□□□□ -0.53
RFC1-210ENST00000505077 TBC1D8O95759 1140 aa11.74□□□□□ -0.53
RFC1-210ENST00000505077 PTPREP23469 700 aa11.74□□□□□ -0.53
RFC1-210ENST00000505077 SLC4A3P48751 1232 aa11.74□□□□□ -0.53
RFC1-210ENST00000505077 GSE1Q14687 1217 aa11.74□□□□□ -0.53
RFC1-210ENST00000505077 WDR78Q5VTH9 848 aa11.74□□□□□ -0.53
RFC1-210ENST00000505077 NSMFQ6X4W1 530 aa11.74□□□□□ -0.53
RFC1-210ENST00000505077 ZSCAN16Q9H4T2 348 aaPredicted RBP11.74□□□□□ -0.53
RFC1-210ENST00000505077 EFCC1Q9HA90 598 aa11.74□□□□□ -0.53
RFC1-210ENST00000505077 KCNJ14Q9UNX9 436 aa11.74□□□□□ -0.53
RFC1-210ENST00000505077 MTMR6Q9Y217 621 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms