RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 TMPRSS15P98073 1019 aa7.14□□□□□ -1.27
HMGB1P3-201ENST00000502802 KCNAB2Q13303 367 aa7.14□□□□□ -1.27
HMGB1P3-201ENST00000502802 SART3Q15020 963 aaKnown RBP7.14□□□□□ -1.27
HMGB1P3-201ENST00000502802 NFE2Q16621 373 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P3-201ENST00000502802 EEF1DP3Q658K8 133 aa7.14□□□□□ -1.27
HMGB1P3-201ENST00000502802 CCDC103Q8IW40 242 aa7.14□□□□□ -1.27
HMGB1P3-201ENST00000502802 DIO2Q92813 273 aa7.14□□□□□ -1.27
HMGB1P3-201ENST00000502802 PUS7LQ9H0K6 701 aaKnown RBP7.14□□□□□ -1.27
HMGB1P3-201ENST00000502802 GEMIN8Q9NWZ8 242 aaKnown RBP7.14□□□□□ -1.27
HMGB1P3-201ENST00000502802 CLEC1BQ9P126 229 aa7.14□□□□□ -1.27
HMGB1P3-201ENST00000502802 FAM155AB1AL88 458 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P3-201ENST00000502802 CBX4O00257 560 aa7.13□□□□□ -1.27
HMGB1P3-201ENST00000502802 NEMP1O14524 444 aa7.13□□□□□ -1.27
HMGB1P3-201ENST00000502802 MSCO60682 206 aa7.13□□□□□ -1.27
HMGB1P3-201ENST00000502802 GLRX3O76003 335 aaKnown RBP7.13□□□□□ -1.27
HMGB1P3-201ENST00000502802 ZNF205O95201 554 aa7.13□□□□□ -1.27
HMGB1P3-201ENST00000502802 GSTM1P09488 218 aa7.13□□□□□ -1.27
HMGB1P3-201ENST00000502802 PYGMP11217 842 aa7.13□□□□□ -1.27
HMGB1P3-201ENST00000502802 CYP27A1Q02318 531 aa7.13□□□□□ -1.27
HMGB1P3-201ENST00000502802 PAK1Q13153 545 aa7.13□□□□□ -1.27
HMGB1P3-201ENST00000502802 LBX2Q6XYB7 198 aa7.13□□□□□ -1.27
HMGB1P3-201ENST00000502802 IGSF22Q8N9C0 903 aa7.13□□□□□ -1.27
HMGB1P3-201ENST00000502802 MTMR8Q96EF0 704 aa7.13□□□□□ -1.27
HMGB1P3-201ENST00000502802 C8orf48Q96LL4 319 aa7.13□□□□□ -1.27
HMGB1P3-201ENST00000502802 MMP19Q99542 508 aa7.13□□□□□ -1.27
HMGB1P3-201ENST00000502802 ALG1Q9BT22 464 aa7.13□□□□□ -1.27
HMGB1P3-201ENST00000502802 SSBP4Q9BWG4 385 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P3-201ENST00000502802 APOBEC2Q9Y235 224 aaKnown RBP7.13□□□□□ -1.27
HMGB1P3-201ENST00000502802 NISCHQ9Y2I1 1504 aa7.12□□□□□ -1.27
HMGB1P3-201ENST00000502802 HMX2A2RU54 273 aa7.12□□□□□ -1.27
HMGB1P3-201ENST00000502802 F2P00734 622 aa7.12□□□□□ -1.27
HMGB1P3-201ENST00000502802 SYPP08247 313 aa7.12□□□□□ -1.27
HMGB1P3-201ENST00000502802 LCP1P13796 627 aa7.12□□□□□ -1.27
HMGB1P3-201ENST00000502802 PAMP19021 973 aa7.12□□□□□ -1.27
HMGB1P3-201ENST00000502802 ID4P47928 161 aa7.12□□□□□ -1.27
HMGB1P3-201ENST00000502802 NEK2P51955 445 aa7.12□□□□□ -1.27
HMGB1P3-201ENST00000502802 PCBP3P57721 371 aaKnown RBP7.12□□□□□ -1.27
HMGB1P3-201ENST00000502802 MCL1Q07820 350 aa7.12□□□□□ -1.27
HMGB1P3-201ENST00000502802 PPP2R5AQ15172 486 aa7.12□□□□□ -1.27
HMGB1P3-201ENST00000502802 SKOR2Q2VWA4 1001 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P3-201ENST00000502802 TSPYL5Q86VY4 417 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P3-201ENST00000502802 NXPE1Q8N323 547 aa7.12□□□□□ -1.27
HMGB1P3-201ENST00000502802 USHBP1Q8N6Y0 703 aa7.12□□□□□ -1.27
HMGB1P3-201ENST00000502802 LINC00116Q8NCU8 138 aa7.12□□□□□ -1.27
HMGB1P3-201ENST00000502802 TSR2Q969E8 191 aaKnown RBP7.12□□□□□ -1.27
HMGB1P3-201ENST00000502802 C7orf69Q9H7B7 122 aa7.12□□□□□ -1.27
HMGB1P3-201ENST00000502802 SLC52A1Q9NWF4 448 aa7.12□□□□□ -1.27
HMGB1P3-201ENST00000502802 RAXQ9Y2V3 346 aa7.12□□□□□ -1.27
HMGB1P3-201ENST00000502802 TRBV23OR9-2A0A075B6M9 112 aa7.11□□□□□ -1.27
HMGB1P3-201ENST00000502802 SSU72P8A0A1W2PR75 194 aa7.11□□□□□ -1.27
HMGB1P3-201ENST00000502802 FAM170BA6NMN3 283 aa7.11□□□□□ -1.27
HMGB1P3-201ENST00000502802 ZNF891A8MT65 544 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P3-201ENST00000502802 M0R2C6 588 aa7.11□□□□□ -1.27
HMGB1P3-201ENST00000502802 GAS7O60861 476 aa7.11□□□□□ -1.27
HMGB1P3-201ENST00000502802 CKMP06732 381 aa7.11□□□□□ -1.27
HMGB1P3-201ENST00000502802 SRGAP2CP0DJJ0 459 aa7.11□□□□□ -1.27
HMGB1P3-201ENST00000502802 IL2P60568 153 aa7.11□□□□□ -1.27
HMGB1P3-201ENST00000502802 DSG1Q02413 1049 aa7.11□□□□□ -1.27
HMGB1P3-201ENST00000502802 KIZQ2M2Z5 673 aa7.11□□□□□ -1.27
HMGB1P3-201ENST00000502802 RTP2Q5QGT7 225 aa7.11□□□□□ -1.27
HMGB1P3-201ENST00000502802 ZNF765Q7L2R6 523 aa7.11□□□□□ -1.27
HMGB1P3-201ENST00000502802 SHISA5Q8N114 240 aa7.11□□□□□ -1.27
HMGB1P3-201ENST00000502802 CNTD1Q8N815 330 aa7.11□□□□□ -1.27
HMGB1P3-201ENST00000502802 RCBTB1Q8NDN9 531 aa7.11□□□□□ -1.27
HMGB1P3-201ENST00000502802 PCDH19Q8TAB3 1148 aa7.11□□□□□ -1.27
HMGB1P3-201ENST00000502802 SMAD5Q99717 465 aaKnown RBP7.11□□□□□ -1.27
HMGB1P3-201ENST00000502802 CELF4Q9BZC1 486 aaKnown RBP7.11□□□□□ -1.27
HMGB1P3-201ENST00000502802 CCDC8Q9H0W5 538 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P3-201ENST00000502802 CABP5Q9NP86 173 aa7.11□□□□□ -1.27
HMGB1P3-201ENST00000502802 STOML1Q9UBI4 398 aa7.11□□□□□ -1.27
HMGB1P3-201ENST00000502802 ZKSCAN5Q9Y2L8 839 aa7.11□□□□□ -1.27
HMGB1P3-201ENST00000502802 COQ6Q9Y2Z9 468 aa7.11□□□□□ -1.27
HMGB1P3-201ENST00000502802 ARID4BQ4LE39 1312 aaPredicted RBP7.1□□□□□ -1.27
HMGB1P3-201ENST00000502802 NPHP3-ACAD11A0A0J9YXS1 232 aa7.1□□□□□ -1.27
HMGB1P3-201ENST00000502802 CCDC194A0A1B0GVG4 234 aa7.1□□□□□ -1.27
HMGB1P3-201ENST00000502802 TRAF5O00463 557 aa7.1□□□□□ -1.27
HMGB1P3-201ENST00000502802 FGF10O15520 208 aaPredicted RBP7.1□□□□□ -1.27
HMGB1P3-201ENST00000502802 TSPAN6O43657 245 aa7.1□□□□□ -1.27
HMGB1P3-201ENST00000502802 FKBP9O95302 570 aa7.1□□□□□ -1.27
HMGB1P3-201ENST00000502802 TPP2P29144 1249 aaPredicted RBP7.1□□□□□ -1.27
HMGB1P3-201ENST00000502802 OXCT1P55809 520 aa7.1□□□□□ -1.27
HMGB1P3-201ENST00000502802 CDKAL1Q5VV42 579 aa7.1□□□□□ -1.27
HMGB1P3-201ENST00000502802 DUSP27Q5VZP5 1158 aa7.1□□□□□ -1.27
HMGB1P3-201ENST00000502802 ARHGAP27Q6ZUM4 889 aa7.1□□□□□ -1.27
HMGB1P3-201ENST00000502802 FKBP9P1Q75LS8 142 aa7.1□□□□□ -1.27
HMGB1P3-201ENST00000502802 WDR75Q8IWA0 830 aaKnown RBP7.1□□□□□ -1.27
HMGB1P3-201ENST00000502802 SMC1BQ8NDV3 1235 aa7.1□□□□□ -1.27
HMGB1P3-201ENST00000502802 MFSD14AQ96MC6 490 aa7.1□□□□□ -1.27
HMGB1P3-201ENST00000502802 POLR3GLQ9BT43 218 aa7.1□□□□□ -1.27
HMGB1P3-201ENST00000502802 TRIM8Q9BZR9 551 aa7.1□□□□□ -1.27
HMGB1P3-201ENST00000502802 MKNK2Q9HBH9 465 aa7.1□□□□□ -1.27
HMGB1P3-201ENST00000502802 CRTAC1Q9NQ79 661 aa7.1□□□□□ -1.27
HMGB1P3-201ENST00000502802 B4GALT6Q9UBX8 382 aa7.1□□□□□ -1.27
HMGB1P3-201ENST00000502802 TCFL5Q9UL49 500 aa7.1□□□□□ -1.27
HMGB1P3-201ENST00000502802 SHTN1A0MZ66 631 aa7.09□□□□□ -1.27
HMGB1P3-201ENST00000502802 WDR64B1ANS9 1081 aa7.09□□□□□ -1.27
HMGB1P3-201ENST00000502802 GSTA4O15217 222 aa7.09□□□□□ -1.27
HMGB1P3-201ENST00000502802 SOD2P04179 222 aa7.09□□□□□ -1.27
HMGB1P3-201ENST00000502802 ENDOUP21128 410 aaKnown RBP7.09□□□□□ -1.27
HMGB1P3-201ENST00000502802 ADCYAP1R1P41586 468 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms