RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 SERPINB13Q9UIV8 391 aa18.55■□□□□ 0.56
VCAN-204ENST00000502527 CDC23Q9UJX2 597 aa18.55■□□□□ 0.56
VCAN-204ENST00000502527 FHOD1Q9Y613 1164 aa18.55■□□□□ 0.56
VCAN-204ENST00000502527 ZRANB2O95218 330 aaKnown RBP eCLIP18.54■□□□□ 0.56
VCAN-204ENST00000502527 SRGNP10124 158 aa18.54■□□□□ 0.56
VCAN-204ENST00000502527 STK4Q13043 487 aa18.54■□□□□ 0.56
VCAN-204ENST00000502527 KIF4BQ2VIQ3 1234 aa18.54■□□□□ 0.56
VCAN-204ENST00000502527 SV2BQ7L1I2 683 aa18.54■□□□□ 0.56
VCAN-204ENST00000502527 CEP112Q8N8E3 955 aa18.54■□□□□ 0.56
VCAN-204ENST00000502527 COA7Q96BR5 231 aa18.54■□□□□ 0.56
VCAN-204ENST00000502527 NUP58Q9BVL2 599 aa18.54■□□□□ 0.56
VCAN-204ENST00000502527 EPN1Q9Y6I3 576 aaPredicted RBP18.54■□□□□ 0.56
VCAN-204ENST00000502527 PNMA6FA0A0J9YX94 578 aa18.54■□□□□ 0.56
VCAN-204ENST00000502527 F8W031 263 aaPredicted RBP18.54■□□□□ 0.56
VCAN-204ENST00000502527 ATP8B1O43520 1251 aa18.54■□□□□ 0.56
VCAN-204ENST00000502527 ANKRD40Q6AI12 368 aa18.54■□□□□ 0.56
VCAN-204ENST00000502527 SRGAP1Q7Z6B7 1085 aa18.54■□□□□ 0.56
VCAN-204ENST00000502527 SLF1Q9BQI6 1058 aa18.54■□□□□ 0.56
VCAN-204ENST00000502527 USP40Q9NVE5 1235 aa18.54■□□□□ 0.56
VCAN-204ENST00000502527 NDUFA10O95299 355 aa18.53■□□□□ 0.56
VCAN-204ENST00000502527 PNMA6AP0CW24 399 aaPredicted RBP18.53■□□□□ 0.56
VCAN-204ENST00000502527 HMGB2P26583 209 aaKnown RBP18.53■□□□□ 0.56
VCAN-204ENST00000502527 ARHGAP25P42331 645 aa18.53■□□□□ 0.56
VCAN-204ENST00000502527 TUBB4BP68371 445 aa18.53■□□□□ 0.56
VCAN-204ENST00000502527 ZNF543Q08ER8 600 aa18.53■□□□□ 0.56
VCAN-204ENST00000502527 PDIA5Q14554 519 aa18.53■□□□□ 0.56
VCAN-204ENST00000502527 SLC35F6Q8N357 371 aa18.53■□□□□ 0.56
VCAN-204ENST00000502527 RETREG2Q8NC44 543 aa18.53■□□□□ 0.56
VCAN-204ENST00000502527 CDK5RAP3Q96JB5 506 aa18.53■□□□□ 0.56
VCAN-204ENST00000502527 GPCPD1Q9NPB8 672 aa18.53■□□□□ 0.56
VCAN-204ENST00000502527 DDX4Q9NQI0 724 aaKnown RBP18.53■□□□□ 0.56
VCAN-204ENST00000502527 LRRC37AA6NMS7 1700 aa18.53■□□□□ 0.56
VCAN-204ENST00000502527 LTBP1Q14766 1721 aa18.53■□□□□ 0.56
VCAN-204ENST00000502527 B4DLN1 442 aa18.53■□□□□ 0.56
VCAN-204ENST00000502527 EIF6P56537 245 aaKnown RBP18.53■□□□□ 0.56
VCAN-204ENST00000502527 CHMP4BP1P59074 171 aa18.53■□□□□ 0.56
VCAN-204ENST00000502527 GRB10Q13322 594 aa18.53■□□□□ 0.56
VCAN-204ENST00000502527 CERS5Q8N5B7 392 aa18.53■□□□□ 0.56
VCAN-204ENST00000502527 CHP1Q99653 195 aa18.53■□□□□ 0.56
VCAN-204ENST00000502527 NAPGQ99747 312 aaPredicted RBP18.53■□□□□ 0.56
VCAN-204ENST00000502527 JMJD4Q9H9V9 463 aa18.53■□□□□ 0.56
VCAN-204ENST00000502527 RIC8AQ9NPQ8 531 aa18.53■□□□□ 0.56
VCAN-204ENST00000502527 FOCADQ5VW36 1801 aa18.52■□□□□ 0.56
VCAN-204ENST00000502527 C10orf71Q711Q0 1435 aa18.52■□□□□ 0.56
VCAN-204ENST00000502527 PVALEFA0A1B0GWK0 134 aa18.52■□□□□ 0.56
VCAN-204ENST00000502527 FCER1AP12319 257 aa18.52■□□□□ 0.56
VCAN-204ENST00000502527 CNOT6LQ96LI5 555 aaKnown RBP18.52■□□□□ 0.56
VCAN-204ENST00000502527 HOXA7P31268 230 aaPredicted RBP18.51■□□□□ 0.55
VCAN-204ENST00000502527 MTIF2P46199 727 aaKnown RBP18.51■□□□□ 0.55
VCAN-204ENST00000502527 TBC1D8BQ0IIM8 1120 aa18.51■□□□□ 0.55
VCAN-204ENST00000502527 GPATCH4Q5T3I0 446 aaKnown RBP18.51■□□□□ 0.55
VCAN-204ENST00000502527 ADGRF4Q8IZF3 695 aa18.51■□□□□ 0.55
VCAN-204ENST00000502527 BLOC1S4Q9NUP1 217 aa18.51■□□□□ 0.55
VCAN-204ENST00000502527 SLC37A4O43826 429 aa18.51■□□□□ 0.55
VCAN-204ENST00000502527 TDP2O95551 362 aa18.51■□□□□ 0.55
VCAN-204ENST00000502527 HLA-DOAP06340 250 aa18.51■□□□□ 0.55
VCAN-204ENST00000502527 SHMT1P34896 483 aa18.51■□□□□ 0.55
VCAN-204ENST00000502527 PPP4R3AQ6IN85 833 aa18.51■□□□□ 0.55
VCAN-204ENST00000502527 HHIPL2Q6UWX4 724 aa18.51■□□□□ 0.55
VCAN-204ENST00000502527 UNC13DQ70J99 1090 aa18.51■□□□□ 0.55
VCAN-204ENST00000502527 PNMA5Q96PV4 448 aa18.51■□□□□ 0.55
VCAN-204ENST00000502527 PARD6BQ9BYG5 372 aa18.51■□□□□ 0.55
VCAN-204ENST00000502527 LRRC27Q9C0I9 530 aa18.51■□□□□ 0.55
VCAN-204ENST00000502527 EPC1Q9H2F5 836 aa18.51■□□□□ 0.55
VCAN-204ENST00000502527 ZNHIT6Q9NWK9 470 aaKnown RBP18.51■□□□□ 0.55
VCAN-204ENST00000502527 TRIM21P19474 475 aaKnown RBP18.5■□□□□ 0.55
VCAN-204ENST00000502527 TNNI2P48788 182 aa18.5■□□□□ 0.55
VCAN-204ENST00000502527 MRPL12P52815 198 aaKnown RBP18.5■□□□□ 0.55
VCAN-204ENST00000502527 MEA1Q16626 185 aa18.5■□□□□ 0.55
VCAN-204ENST00000502527 KRT79Q5XKE5 535 aa18.5■□□□□ 0.55
VCAN-204ENST00000502527 CENPPQ6IPU0 288 aa18.5■□□□□ 0.55
VCAN-204ENST00000502527 CLEC10AQ8IUN9 316 aa18.5■□□□□ 0.55
VCAN-204ENST00000502527 KIAA0895Q8NCT3 520 aa18.5■□□□□ 0.55
VCAN-204ENST00000502527 LARP4BQ92615 738 aaKnown RBP18.5■□□□□ 0.55
VCAN-204ENST00000502527 CUL5Q93034 780 aa18.5■□□□□ 0.55
VCAN-204ENST00000502527 NOC4LQ9BVI4 516 aaKnown RBP18.5■□□□□ 0.55
VCAN-204ENST00000502527 HAUS4Q9H6D7 363 aa18.5■□□□□ 0.55
VCAN-204ENST00000502527 EDIL3O43854 480 aa18.5■□□□□ 0.55
VCAN-204ENST00000502527 NPR1P16066 1061 aa18.5■□□□□ 0.55
VCAN-204ENST00000502527 ZBED6P86452 979 aa18.5■□□□□ 0.55
VCAN-204ENST00000502527 MCM6Q14566 821 aa18.5■□□□□ 0.55
VCAN-204ENST00000502527 WHAMMP3Q1A5X7 153 aa18.5■□□□□ 0.55
VCAN-204ENST00000502527 CDC42EP5Q6NZY7 148 aa18.5■□□□□ 0.55
VCAN-204ENST00000502527 CC2D1AQ6P1N0 951 aaPredicted RBP18.5■□□□□ 0.55
VCAN-204ENST00000502527 ZSCAN29Q8IWY8 852 aaPredicted RBP18.5■□□□□ 0.55
VCAN-204ENST00000502527 TEKT1Q969V4 418 aa18.5■□□□□ 0.55
VCAN-204ENST00000502527 IQCDQ96DY2 449 aa18.5■□□□□ 0.55
VCAN-204ENST00000502527 TTYH3Q9C0H2 523 aa18.5■□□□□ 0.55
VCAN-204ENST00000502527 SLC39A2Q9NP94 309 aa18.5■□□□□ 0.55
VCAN-204ENST00000502527 PRDM4Q9UKN5 801 aa18.5■□□□□ 0.55
VCAN-204ENST00000502527 REXO2Q9Y3B8 237 aaKnown RBP18.5■□□□□ 0.55
VCAN-204ENST00000502527 MYMKA6NI61 221 aa18.49■□□□□ 0.55
VCAN-204ENST00000502527 POTEB2H3BUK9 544 aa18.49■□□□□ 0.55
VCAN-204ENST00000502527 ABL1P00519 1130 aa18.49■□□□□ 0.55
VCAN-204ENST00000502527 SCNN1DP51172 638 aa18.49■□□□□ 0.55
VCAN-204ENST00000502527 KRT83P78385 493 aa18.49■□□□□ 0.55
VCAN-204ENST00000502527 FKBP15Q5T1M5 1219 aa18.49■□□□□ 0.55
VCAN-204ENST00000502527 WDR59Q6PJI9 974 aa18.49■□□□□ 0.55
VCAN-204ENST00000502527 RAD54LQ92698 747 aa18.49■□□□□ 0.55
VCAN-204ENST00000502527 TMX4Q9H1E5 349 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms