RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 BICD2Q8TD16 824 aa22.42■■□□□ 1.18
LINC01550-201ENST00000499006 TNFRSF25Q93038 417 aa22.42■■□□□ 1.18
LINC01550-201ENST00000499006 EFCC1Q9HA90 598 aa22.42■■□□□ 1.18
LINC01550-201ENST00000499006 SAGE1Q9NXZ1 904 aa22.42■■□□□ 1.18
LINC01550-201ENST00000499006 MAP3K20Q9NYL2 800 aaKnown RBP22.42■■□□□ 1.18
LINC01550-201ENST00000499006 CIZ1Q9ULV3 898 aaPredicted RBP22.42■■□□□ 1.18
LINC01550-201ENST00000499006 TCHHQ07283 1943 aa22.41■■□□□ 1.18
LINC01550-201ENST00000499006 BTBD18B2RXH4 712 aa22.41■■□□□ 1.18
LINC01550-201ENST00000499006 BRD1O95696 1058 aa22.41■■□□□ 1.18
LINC01550-201ENST00000499006 CFBP00751 764 aa22.41■■□□□ 1.18
LINC01550-201ENST00000499006 U2AF2P26368 475 aaKnown RBP eCLIP22.41■■□□□ 1.18
LINC01550-201ENST00000499006 SAFBQ15424 915 aaKnown RBP eCLIP22.41■■□□□ 1.18
LINC01550-201ENST00000499006 USP17L6PQ6QN14 398 aa22.41■■□□□ 1.18
LINC01550-201ENST00000499006 FOXP1Q9H334 677 aaPredicted RBP22.41■■□□□ 1.18
LINC01550-201ENST00000499006 A1CFQ9NQ94 594 aaKnown RBP22.41■■□□□ 1.18
LINC01550-201ENST00000499006 PCDHA6Q9UN73 950 aa22.41■■□□□ 1.18
LINC01550-201ENST00000499006 ZDHHC9Q9Y397 364 aa22.41■■□□□ 1.18
LINC01550-201ENST00000499006 PCDHA8Q9Y5H6 950 aa22.41■■□□□ 1.18
LINC01550-201ENST00000499006 KIF28PB7ZC32 967 aa22.41■■□□□ 1.18
LINC01550-201ENST00000499006 GCOM1H8Y6P7 765 aaPredicted RBP22.41■■□□□ 1.18
LINC01550-201ENST00000499006 POLR2MP0CAP2 368 aa22.41■■□□□ 1.18
LINC01550-201ENST00000499006 MAP2K1Q02750 393 aaPredicted RBP22.41■■□□□ 1.18
LINC01550-201ENST00000499006 NR5A1Q13285 461 aa22.41■■□□□ 1.18
LINC01550-201ENST00000499006 UBE2SQ16763 222 aa22.41■■□□□ 1.18
LINC01550-201ENST00000499006 REXO1Q8N1G1 1221 aaKnown RBP22.41■■□□□ 1.18
LINC01550-201ENST00000499006 BRMS1Q9HCU9 246 aa22.41■■□□□ 1.18
LINC01550-201ENST00000499006 ZSCAN22P10073 491 aaPredicted RBP22.4■■□□□ 1.18
LINC01550-201ENST00000499006 MAPK4P31152 587 aa22.4■■□□□ 1.18
LINC01550-201ENST00000499006 HOXA13P31271 388 aaPredicted RBP22.4■■□□□ 1.18
LINC01550-201ENST00000499006 RPS6P62753 249 aaKnown RBP22.4■■□□□ 1.18
LINC01550-201ENST00000499006 RNF207Q6ZRF8 634 aa22.4■■□□□ 1.18
LINC01550-201ENST00000499006 RASGRP4Q8TDF6 673 aa22.4■■□□□ 1.18
LINC01550-201ENST00000499006 CYP39A1Q9NYL5 469 aa22.4■■□□□ 1.18
LINC01550-201ENST00000499006 BIN2Q9UBW5 565 aaPredicted RBP22.4■■□□□ 1.18
LINC01550-201ENST00000499006 PFASO15067 1338 aa22.39■■□□□ 1.18
LINC01550-201ENST00000499006 NUCB2P80303 420 aa22.39■■□□□ 1.17
LINC01550-201ENST00000499006 NSMFQ6X4W1 530 aa22.39■■□□□ 1.17
LINC01550-201ENST00000499006 SLC30A10Q6XR72 485 aa22.39■■□□□ 1.17
LINC01550-201ENST00000499006 TMEM260Q9NX78 707 aa22.39■■□□□ 1.17
LINC01550-201ENST00000499006 BAATQ14032 418 aaPredicted RBP22.38■■□□□ 1.17
LINC01550-201ENST00000499006 MCTP1Q6DN14 999 aa22.38■■□□□ 1.17
LINC01550-201ENST00000499006 GPR142Q7Z601 462 aa22.38■■□□□ 1.17
LINC01550-201ENST00000499006 SYTL5Q8TDW5 730 aaPredicted RBP22.38■■□□□ 1.17
LINC01550-201ENST00000499006 COL20A1Q9P218 1284 aa22.38■■□□□ 1.17
LINC01550-201ENST00000499006 MCM3APO60318 1980 aa22.37■■□□□ 1.17
LINC01550-201ENST00000499006 STRNO43815 780 aa22.37■■□□□ 1.17
LINC01550-201ENST00000499006 RESTQ13127 1097 aa22.37■■□□□ 1.17
LINC01550-201ENST00000499006 AP3B2Q13367 1082 aa22.37■■□□□ 1.17
LINC01550-201ENST00000499006 NOM1Q5C9Z4 860 aaKnown RBP22.37■■□□□ 1.17
LINC01550-201ENST00000499006 EARS2Q5JPH6 523 aaKnown RBP22.37■■□□□ 1.17
LINC01550-201ENST00000499006 JAKMIP3Q5VZ66 844 aa22.37■■□□□ 1.17
LINC01550-201ENST00000499006 MCTP2Q6DN12 878 aa22.37■■□□□ 1.17
LINC01550-201ENST00000499006 FERMT3Q86UX7 667 aa22.37■■□□□ 1.17
LINC01550-201ENST00000499006 NOSTRINQ8IVI9 506 aa22.37■■□□□ 1.17
LINC01550-201ENST00000499006 ABRAQ8N0Z2 381 aa22.37■■□□□ 1.17
LINC01550-201ENST00000499006 ANKRD35Q8N283 1001 aa22.37■■□□□ 1.17
LINC01550-201ENST00000499006 MMP19Q99542 508 aa22.37■■□□□ 1.17
LINC01550-201ENST00000499006 WBP1LQ9NX94 342 aa22.37■■□□□ 1.17
LINC01550-201ENST00000499006 CHMP5Q9NZZ3 219 aa22.37■■□□□ 1.17
LINC01550-201ENST00000499006 DNAJC25-GNG10A0A024R161 153 aa22.36■■□□□ 1.17
LINC01550-201ENST00000499006 F13A1P00488 732 aa22.36■■□□□ 1.17
LINC01550-201ENST00000499006 FOSP01100 380 aaPredicted RBP22.36■■□□□ 1.17
LINC01550-201ENST00000499006 FCER1AP12319 257 aa22.36■■□□□ 1.17
LINC01550-201ENST00000499006 WDR78Q5VTH9 848 aa22.36■■□□□ 1.17
LINC01550-201ENST00000499006 PLEKHH3Q7Z736 793 aa22.36■■□□□ 1.17
LINC01550-201ENST00000499006 CCAR1Q8IX12 1150 aaKnown RBP22.36■■□□□ 1.17
LINC01550-201ENST00000499006 LRRC37A2A6NM11 1700 aa22.36■■□□□ 1.17
LINC01550-201ENST00000499006 PTPREP23469 700 aa22.35■■□□□ 1.17
LINC01550-201ENST00000499006 CTGFP29279 349 aa22.35■■□□□ 1.17
LINC01550-201ENST00000499006 LACTBP83111 547 aaPredicted RBP22.35■■□□□ 1.17
LINC01550-201ENST00000499006 SP3Q02447 781 aa22.35■■□□□ 1.17
LINC01550-201ENST00000499006 GRB14Q14449 540 aa22.35■■□□□ 1.17
LINC01550-201ENST00000499006 KRT25Q7Z3Z0 450 aa22.35■■□□□ 1.17
LINC01550-201ENST00000499006 FCHSD1Q86WN1 690 aa22.35■■□□□ 1.17
LINC01550-201ENST00000499006 ZSCAN16Q9H4T2 348 aaPredicted RBP22.35■■□□□ 1.17
LINC01550-201ENST00000499006 KIAA1217Q5T5P2 1943 aa22.35■■□□□ 1.17
LINC01550-201ENST00000499006 GNL2Q13823 731 aaKnown RBP22.34■■□□□ 1.17
LINC01550-201ENST00000499006 KCTD2Q14681 263 aa22.34■■□□□ 1.17
LINC01550-201ENST00000499006 FOXD4L5Q5VV16 416 aaPredicted RBP22.34■■□□□ 1.17
LINC01550-201ENST00000499006 BRAPQ7Z569 592 aa22.34■■□□□ 1.17
LINC01550-201ENST00000499006 FAM133AQ8N9E0 248 aa22.34■■□□□ 1.17
LINC01550-201ENST00000499006 FOXD4L4Q8WXT5 416 aaPredicted RBP22.34■■□□□ 1.17
LINC01550-201ENST00000499006 PGBD1Q96JS3 809 aa22.34■■□□□ 1.17
LINC01550-201ENST00000499006 PURBQ96QR8 312 aaKnown RBP22.34■■□□□ 1.17
LINC01550-201ENST00000499006 ANO3Q9BYT9 981 aa22.34■■□□□ 1.17
LINC01550-201ENST00000499006 IVNS1ABPQ9Y6Y0 642 aa22.34■■□□□ 1.17
LINC01550-201ENST00000499006 CASP8AP2Q9UKL3 1982 aa22.34■■□□□ 1.17
LINC01550-201ENST00000499006 FRMPD4Q14CM0 1322 aa22.34■■□□□ 1.17
LINC01550-201ENST00000499006 CCDC194A0A1B0GVG4 234 aa22.34■■□□□ 1.17
LINC01550-201ENST00000499006 FAM205CA6NFA0 338 aa22.34■■□□□ 1.17
LINC01550-201ENST00000499006 SPDYE3A6NKU9 549 aa22.34■■□□□ 1.17
LINC01550-201ENST00000499006 GPR25O00155 361 aa22.34■■□□□ 1.17
LINC01550-201ENST00000499006 PIK3AP1Q6ZUJ8 805 aa22.34■■□□□ 1.17
LINC01550-201ENST00000499006 CRYGNQ8WXF5 182 aa22.34■■□□□ 1.17
LINC01550-201ENST00000499006 TAAR1Q96RJ0 339 aa22.34■■□□□ 1.17
LINC01550-201ENST00000499006 BEGAINQ9BUH8 593 aa22.34■■□□□ 1.17
LINC01550-201ENST00000499006 RPTORQ8N122 1335 aa22.33■■□□□ 1.17
LINC01550-201ENST00000499006 SLC15A5A6NIM6 579 aa22.33■■□□□ 1.16
LINC01550-201ENST00000499006 ADORA2AP29274 412 aa22.33■■□□□ 1.16
LINC01550-201ENST00000499006 NONOQ15233 471 aaKnown RBP eCLIP22.33■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms