RNA–Protein interactions for RNA: ENST00000498519.5

SHANK2-217, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 510 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-217ENST00000498519 ORC4O43929 436 aa16.11■□□□□ 0.17
SHANK2-217ENST00000498519 ALDH5A1P51649 535 aaPredicted RBP16.11■□□□□ 0.17
SHANK2-217ENST00000498519 BAATQ14032 418 aaPredicted RBP16.11■□□□□ 0.17
SHANK2-217ENST00000498519 CCDC85BQ15834 202 aaPredicted RBP16.11■□□□□ 0.17
SHANK2-217ENST00000498519 BTNL9Q6UXG8 535 aa16.11■□□□□ 0.17
SHANK2-217ENST00000498519 ADAMTS19Q8TE59 1207 aa16.11■□□□□ 0.17
SHANK2-217ENST00000498519 UHRF1Q96T88 793 aaPredicted RBP16.11■□□□□ 0.17
SHANK2-217ENST00000498519 MTG1Q9BT17 334 aaPredicted RBP16.11■□□□□ 0.17
SHANK2-217ENST00000498519 IL17RBQ9NRM6 502 aa16.11■□□□□ 0.17
SHANK2-217ENST00000498519 PTPDC1A2A3K4 754 aa16.1■□□□□ 0.17
SHANK2-217ENST00000498519 GTPBP6O43824 516 aaPredicted RBP16.1■□□□□ 0.17
SHANK2-217ENST00000498519 TOP1P11387 765 aaKnown RBP16.1■□□□□ 0.17
SHANK2-217ENST00000498519 PSMC6P62333 389 aa16.1■□□□□ 0.17
SHANK2-217ENST00000498519 PTPN11Q06124 597 aaPredicted RBP16.1■□□□□ 0.17
SHANK2-217ENST00000498519 ADGRE1Q14246 886 aa16.1■□□□□ 0.17
SHANK2-217ENST00000498519 TMEM67Q5HYA8 995 aa16.1■□□□□ 0.17
SHANK2-217ENST00000498519 SYDE2Q5VT97 1194 aa16.1■□□□□ 0.17
SHANK2-217ENST00000498519 RETREG2Q8NC44 543 aa16.1■□□□□ 0.17
SHANK2-217ENST00000498519 PHOSPHO2Q8TCD6 241 aa16.1■□□□□ 0.17
SHANK2-217ENST00000498519 CHMP4CQ96CF2 233 aa16.1■□□□□ 0.17
SHANK2-217ENST00000498519 EVI5LQ96CN4 794 aa16.1■□□□□ 0.17
SHANK2-217ENST00000498519 MAF1Q9H063 256 aa16.1■□□□□ 0.17
SHANK2-217ENST00000498519 WNT8AQ9H1J5 351 aa16.1■□□□□ 0.17
SHANK2-217ENST00000498519 HELLSQ9NRZ9 838 aa16.1■□□□□ 0.17
SHANK2-217ENST00000498519 TOMM22Q9NS69 142 aa16.1■□□□□ 0.17
SHANK2-217ENST00000498519 TCP11L1Q9NUJ3 509 aa16.1■□□□□ 0.17
SHANK2-217ENST00000498519 YBX2Q9Y2T7 364 aaKnown RBP16.1■□□□□ 0.17
SHANK2-217ENST00000498519 TNKSO95271 1327 aa16.1■□□□□ 0.17
SHANK2-217ENST00000498519 UMODL1Q5DID0 1318 aa16.1■□□□□ 0.17
SHANK2-217ENST00000498519 RBM47A0AV96 593 aaKnown RBP16.09■□□□□ 0.17
SHANK2-217ENST00000498519 KIF28PB7ZC32 967 aa16.09■□□□□ 0.17
SHANK2-217ENST00000498519 PITPNM1O00562 1244 aa16.09■□□□□ 0.17
SHANK2-217ENST00000498519 FGRP09769 529 aa16.09■□□□□ 0.17
SHANK2-217ENST00000498519 PCP11498 1178 aaKnown RBP16.09■□□□□ 0.17
SHANK2-217ENST00000498519 NT5C2P49902 561 aa16.09■□□□□ 0.17
SHANK2-217ENST00000498519 SNAP25P60880 206 aa16.09■□□□□ 0.17
SHANK2-217ENST00000498519 PURAQ00577 322 aaKnown RBP16.09■□□□□ 0.17
SHANK2-217ENST00000498519 CTDSPL2Q05D32 466 aa16.09■□□□□ 0.17
SHANK2-217ENST00000498519 PDE4DQ08499 809 aa16.09■□□□□ 0.17
SHANK2-217ENST00000498519 PPP2R5BQ15173 497 aa16.09■□□□□ 0.17
SHANK2-217ENST00000498519 ALX1Q15699 326 aa16.09■□□□□ 0.17
SHANK2-217ENST00000498519 NFRKBQ6P4R8 1299 aa16.09■□□□□ 0.17
SHANK2-217ENST00000498519 RNF207Q6ZRF8 634 aa16.09■□□□□ 0.17
SHANK2-217ENST00000498519 DNERQ8NFT8 737 aa16.09■□□□□ 0.17
SHANK2-217ENST00000498519 SCFD2Q8WU76 684 aa16.09■□□□□ 0.17
SHANK2-217ENST00000498519 TTC14Q96N46 770 aa16.09■□□□□ 0.17
SHANK2-217ENST00000498519 SLC9A7Q96T83 725 aa16.09■□□□□ 0.17
SHANK2-217ENST00000498519 MTMR7Q9Y216 660 aa16.09■□□□□ 0.17
SHANK2-217ENST00000498519 NMT2O60551 498 aa16.08■□□□□ 0.16
SHANK2-217ENST00000498519 MYL3P08590 195 aa16.08■□□□□ 0.16
SHANK2-217ENST00000498519 COL9A1P20849 921 aa16.08■□□□□ 0.16
SHANK2-217ENST00000498519 BFSP2Q13515 415 aa16.08■□□□□ 0.16
SHANK2-217ENST00000498519 CCDC155Q8N6L0 562 aa16.08■□□□□ 0.16
SHANK2-217ENST00000498519 OR6J1Q8NGC5 347 aa16.08■□□□□ 0.16
SHANK2-217ENST00000498519 SCLYQ96I15 445 aa16.08■□□□□ 0.16
SHANK2-217ENST00000498519 TRMT13Q9NUP7 481 aaKnown RBP16.08■□□□□ 0.16
SHANK2-217ENST00000498519 NOD1Q9Y239 953 aa16.08■□□□□ 0.16
SHANK2-217ENST00000498519 MYH7P12883 1935 aa16.07■□□□□ 0.16
SHANK2-217ENST00000498519 POU3F3P20264 500 aaPredicted RBP16.07■□□□□ 0.16
SHANK2-217ENST00000498519 CALML3P27482 149 aa16.07■□□□□ 0.16
SHANK2-217ENST00000498519 RABGGTBP53611 331 aa16.07■□□□□ 0.16
SHANK2-217ENST00000498519 FAM47CQ5HY64 1035 aa16.07■□□□□ 0.16
SHANK2-217ENST00000498519 CHD9Q3L8U1 2897 aa16.06■□□□□ 0.16
SHANK2-217ENST00000498519 WDR19Q8NEZ3 1342 aa16.06■□□□□ 0.16
SHANK2-217ENST00000498519 A6NJR5 290 aa16.06■□□□□ 0.16
SHANK2-217ENST00000498519 NFIBO00712 420 aa16.06■□□□□ 0.16
SHANK2-217ENST00000498519 BAIAP3O94812 1187 aa16.06■□□□□ 0.16
SHANK2-217ENST00000498519 CYP2C9P11712 490 aa16.06■□□□□ 0.16
SHANK2-217ENST00000498519 SLC16A2P36021 539 aa16.06■□□□□ 0.16
SHANK2-217ENST00000498519 TTLL4Q14679 1199 aa16.06■□□□□ 0.16
SHANK2-217ENST00000498519 SKIV2LQ15477 1246 aaKnown RBP16.06■□□□□ 0.16
SHANK2-217ENST00000498519 NBPF20Q3BBV1 942 aa16.06■□□□□ 0.16
SHANK2-217ENST00000498519 MCMDC2Q4G0Z9 681 aa16.06■□□□□ 0.16
SHANK2-217ENST00000498519 DEFB128Q7Z7B8 93 aa16.06■□□□□ 0.16
SHANK2-217ENST00000498519 RGS22Q8NE09 1264 aa16.06■□□□□ 0.16
SHANK2-217ENST00000498519 TMEM47Q9BQJ4 181 aa16.06■□□□□ 0.16
SHANK2-217ENST00000498519 C1QTNF1Q9BXJ1 281 aa16.06■□□□□ 0.16
SHANK2-217ENST00000498519 COG5Q9UP83 839 aa16.06■□□□□ 0.16
SHANK2-217ENST00000498519 ZMYM6O95789 1325 aa16.05■□□□□ 0.16
SHANK2-217ENST00000498519 PARNO95453 639 aaKnown RBP16.05■□□□□ 0.16
SHANK2-217ENST00000498519 TXNP10599 105 aaKnown RBP16.05■□□□□ 0.16
SHANK2-217ENST00000498519 EDNRBP24530 442 aa16.05■□□□□ 0.16
SHANK2-217ENST00000498519 MFAP1P55081 439 aaKnown RBP16.05■□□□□ 0.16
SHANK2-217ENST00000498519 RRP12Q5JTH9 1297 aaKnown RBP16.05■□□□□ 0.16
SHANK2-217ENST00000498519 GPATCH4Q5T3I0 446 aaKnown RBP16.05■□□□□ 0.16
SHANK2-217ENST00000498519 TTBK2Q6IQ55 1244 aa16.05■□□□□ 0.16
SHANK2-217ENST00000498519 MICALL1Q8N3F8 863 aa16.05■□□□□ 0.16
SHANK2-217ENST00000498519 PURBQ96QR8 312 aaKnown RBP16.05■□□□□ 0.16
SHANK2-217ENST00000498519 FTOQ9C0B1 505 aaKnown RBP eCLIP16.05■□□□□ 0.16
SHANK2-217ENST00000498519 RNF41Q9H4P4 317 aaPredicted RBP16.05■□□□□ 0.16
SHANK2-217ENST00000498519 GPCPD1Q9NPB8 672 aa16.05■□□□□ 0.16
SHANK2-217ENST00000498519 INCENPQ9NQS7 918 aa16.05■□□□□ 0.16
SHANK2-217ENST00000498519 DDX49Q9Y6V7 483 aaKnown RBP16.05■□□□□ 0.16
SHANK2-217ENST00000498519 FRMPD2Q68DX3 1309 aaPredicted RBP16.04■□□□□ 0.16
SHANK2-217ENST00000498519 FOXP2O15409 715 aa16.04■□□□□ 0.16
SHANK2-217ENST00000498519 FGAP02671 866 aa16.04■□□□□ 0.16
SHANK2-217ENST00000498519 CA3P07451 260 aa16.04■□□□□ 0.16
SHANK2-217ENST00000498519 IQCF3P0C7M6 154 aa16.04■□□□□ 0.16
SHANK2-217ENST00000498519 PDHBP11177 359 aa16.04■□□□□ 0.16
SHANK2-217ENST00000498519 RPS6P62753 249 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms