RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 PDE4AP27815 886 aa14.26□□□□□ -0.13
THBS3-209ENST00000498500 TTLL4Q14679 1199 aa14.26□□□□□ -0.13
THBS3-209ENST00000498500 LRRFIP1Q32MZ4 808 aaKnown RBP14.26□□□□□ -0.13
THBS3-209ENST00000498500 IQSEC1Q6DN90 963 aa14.26□□□□□ -0.13
THBS3-209ENST00000498500 GIMAP6Q6P9H5 292 aa14.26□□□□□ -0.13
THBS3-209ENST00000498500 GMCL1P1Q8NEA9 526 aa14.26□□□□□ -0.13
THBS3-209ENST00000498500 TRERF1Q96PN7 1200 aa14.26□□□□□ -0.13
THBS3-209ENST00000498500 ALDH8A1Q9H2A2 487 aaPredicted RBP14.26□□□□□ -0.13
THBS3-209ENST00000498500 PDGFCQ9NRA1 345 aa14.26□□□□□ -0.13
THBS3-209ENST00000498500 MTMR4Q9NYA4 1195 aa14.26□□□□□ -0.13
THBS3-209ENST00000498500 DDX49Q9Y6V7 483 aaKnown RBP14.26□□□□□ -0.13
THBS3-209ENST00000498500 TRANK1O15050 2925 aa14.25□□□□□ -0.13
THBS3-209ENST00000498500 LCTP09848 1927 aa14.25□□□□□ -0.13
THBS3-209ENST00000498500 SUPT20HL2P0C7V6 817 aa14.25□□□□□ -0.13
THBS3-209ENST00000498500 CYP2C9P11712 490 aa14.25□□□□□ -0.13
THBS3-209ENST00000498500 ALAS1P13196 640 aa14.25□□□□□ -0.13
THBS3-209ENST00000498500 POU3F3P20264 500 aaPredicted RBP14.25□□□□□ -0.13
THBS3-209ENST00000498500 STAT2P52630 851 aa14.25□□□□□ -0.13
THBS3-209ENST00000498500 TMEM31Q5JXX7 168 aa14.25□□□□□ -0.13
THBS3-209ENST00000498500 KIAA1211Q6ZU35 1233 aa14.25□□□□□ -0.13
THBS3-209ENST00000498500 FBXO16Q8IX29 292 aaPredicted RBP14.25□□□□□ -0.13
THBS3-209ENST00000498500 CHURC1Q8WUH1 139 aa14.25□□□□□ -0.13
THBS3-209ENST00000498500 CHMP4CQ96CF2 233 aa14.25□□□□□ -0.13
THBS3-209ENST00000498500 TRMT13Q9NUP7 481 aaKnown RBP14.25□□□□□ -0.13
THBS3-209ENST00000498500 SYNPO2Q9UMS6 1093 aa14.25□□□□□ -0.13
THBS3-209ENST00000498500 Q9Y3F1 56 aa14.25□□□□□ -0.13
THBS3-209ENST00000498500 ARIH1Q9Y4X5 557 aaPredicted RBP14.25□□□□□ -0.13
THBS3-209ENST00000498500 TNKSO95271 1327 aa14.24□□□□□ -0.13
THBS3-209ENST00000498500 A0A0D9SFI3 127 aa14.24□□□□□ -0.13
THBS3-209ENST00000498500 KIF28PB7ZC32 967 aa14.24□□□□□ -0.13
THBS3-209ENST00000498500 APPP05067 770 aa14.24□□□□□ -0.13
THBS3-209ENST00000498500 TSPY3P0CV98 308 aa14.24□□□□□ -0.13
THBS3-209ENST00000498500 TSPY8P0CW00 308 aa14.24□□□□□ -0.13
THBS3-209ENST00000498500 GNAT2P19087 354 aa14.24□□□□□ -0.13
THBS3-209ENST00000498500 TDO2P48775 406 aa14.24□□□□□ -0.13
THBS3-209ENST00000498500 TKFCQ3LXA3 575 aa14.24□□□□□ -0.13
THBS3-209ENST00000498500 TMEM63BQ5T3F8 832 aa14.24□□□□□ -0.13
THBS3-209ENST00000498500 KRT40Q6A162 431 aa14.24□□□□□ -0.13
THBS3-209ENST00000498500 TAPT1Q6NXT6 567 aa14.24□□□□□ -0.13
THBS3-209ENST00000498500 FAM160B2Q86V87 743 aa14.24□□□□□ -0.13
THBS3-209ENST00000498500 ARNTL2Q8WYA1 636 aa14.24□□□□□ -0.13
THBS3-209ENST00000498500 VWCEQ96DN2 955 aa14.24□□□□□ -0.13
THBS3-209ENST00000498500 SLC9A7Q96T83 725 aa14.24□□□□□ -0.13
THBS3-209ENST00000498500 TANC1Q9C0D5 1861 aa14.23□□□□□ -0.13
THBS3-209ENST00000498500 TET1Q8NFU7 2136 aa14.23□□□□□ -0.13
THBS3-209ENST00000498500 ZNF536O15090 1300 aa14.23□□□□□ -0.13
THBS3-209ENST00000498500 TLL1O43897 1013 aa14.23□□□□□ -0.13
THBS3-209ENST00000498500 SLC1A4P43007 532 aa14.23□□□□□ -0.13
THBS3-209ENST00000498500 STAG1Q8WVM7 1258 aa14.23□□□□□ -0.13
THBS3-209ENST00000498500 HLA-CQ95604 372 aa14.23□□□□□ -0.13
THBS3-209ENST00000498500 FAM227BQ96M60 508 aa14.23□□□□□ -0.13
THBS3-209ENST00000498500 VTA1Q9NP79 307 aa14.23□□□□□ -0.13
THBS3-209ENST00000498500 POLR3EQ9NVU0 708 aa14.23□□□□□ -0.13
THBS3-209ENST00000498500 PTPRSQ13332 1948 aa14.22□□□□□ -0.13
THBS3-209ENST00000498500 EPOPA6NHQ4 379 aa14.22□□□□□ -0.13
THBS3-209ENST00000498500 MYL3P08590 195 aa14.22□□□□□ -0.13
THBS3-209ENST00000498500 MCCP23508 829 aa14.22□□□□□ -0.13
THBS3-209ENST00000498500 TAP1Q03518 808 aa14.22□□□□□ -0.13
THBS3-209ENST00000498500 MUM1L1Q5H9M0 696 aa14.22□□□□□ -0.13
THBS3-209ENST00000498500 FAM47CQ5HY64 1035 aa14.22□□□□□ -0.13
THBS3-209ENST00000498500 NSMFQ6X4W1 530 aa14.22□□□□□ -0.13
THBS3-209ENST00000498500 ZNF589Q86UQ0 364 aaPredicted RBP14.22□□□□□ -0.13
THBS3-209ENST00000498500 TICAM2Q86XR7 235 aa14.22□□□□□ -0.13
THBS3-209ENST00000498500 IFNL3Q8IZI9 196 aa14.22□□□□□ -0.13
THBS3-209ENST00000498500 RETREG2Q8NC44 543 aa14.22□□□□□ -0.13
THBS3-209ENST00000498500 NEDD1Q8NHV4 660 aa14.22□□□□□ -0.13
THBS3-209ENST00000498500 PHOSPHO2Q8TCD6 241 aa14.22□□□□□ -0.13
THBS3-209ENST00000498500 FTOQ9C0B1 505 aaKnown RBP eCLIP14.22□□□□□ -0.13
THBS3-209ENST00000498500 GPHNQ9NQX3 736 aaPredicted RBP14.22□□□□□ -0.13
THBS3-209ENST00000498500 CYP39A1Q9NYL5 469 aa14.22□□□□□ -0.13
THBS3-209ENST00000498500 SCN10AQ9Y5Y9 1956 aa14.22□□□□□ -0.13
THBS3-209ENST00000498500 PLIN4Q96Q06 1357 aa14.22□□□□□ -0.13
THBS3-209ENST00000498500 COL4A4P53420 1690 aaPredicted RBP14.21□□□□□ -0.13
THBS3-209ENST00000498500 PATL2C9JE40 543 aaKnown RBP14.21□□□□□ -0.13
THBS3-209ENST00000498500 RFC2P35250 354 aa14.21□□□□□ -0.13
THBS3-209ENST00000498500 CPT1AP50416 773 aa14.21□□□□□ -0.13
THBS3-209ENST00000498500 SNAP25P60880 206 aa14.21□□□□□ -0.13
THBS3-209ENST00000498500 TFAP4Q01664 338 aa14.21□□□□□ -0.13
THBS3-209ENST00000498500 PDE4BQ07343 736 aa14.21□□□□□ -0.13
THBS3-209ENST00000498500 NMIQ13287 307 aaPredicted RBP14.21□□□□□ -0.13
THBS3-209ENST00000498500 DUSP28Q4G0W2 176 aa14.21□□□□□ -0.13
THBS3-209ENST00000498500 VPS53Q5VIR6 699 aa14.21□□□□□ -0.13
THBS3-209ENST00000498500 KCTD1Q719H9 257 aa14.21□□□□□ -0.13
THBS3-209ENST00000498500 HERC6Q8IVU3 1022 aa14.21□□□□□ -0.13
THBS3-209ENST00000498500 PURBQ96QR8 312 aaKnown RBP14.21□□□□□ -0.13
THBS3-209ENST00000498500 MTG1Q9BT17 334 aaPredicted RBP14.21□□□□□ -0.13
THBS3-209ENST00000498500 HELLSQ9NRZ9 838 aa14.21□□□□□ -0.13
THBS3-209ENST00000498500 TRIM6-TRIM34B2RNG4 842 aa14.2□□□□□ -0.14
THBS3-209ENST00000498500 GSPT1P15170 499 aaKnown RBP14.2□□□□□ -0.14
THBS3-209ENST00000498500 PURAQ00577 322 aaKnown RBP14.2□□□□□ -0.14
THBS3-209ENST00000498500 GRB10Q13322 594 aa14.2□□□□□ -0.14
THBS3-209ENST00000498500 BRDTQ58F21 947 aaPredicted RBP14.2□□□□□ -0.14
THBS3-209ENST00000498500 GMCL1Q96IK5 515 aa14.2□□□□□ -0.14
THBS3-209ENST00000498500 WDR11Q9BZH6 1224 aa14.2□□□□□ -0.14
THBS3-209ENST00000498500 ADD3Q9UEY8 706 aaKnown RBP14.2□□□□□ -0.14
THBS3-209ENST00000498500 CCPG1Q9ULG6 757 aa14.2□□□□□ -0.14
THBS3-209ENST00000498500 FAM86C2PA6NEL3 165 aa14.19□□□□□ -0.14
THBS3-209ENST00000498500 GPR37L1O60883 481 aa14.19□□□□□ -0.14
THBS3-209ENST00000498500 ARHGEF15O94989 841 aa14.19□□□□□ -0.14
THBS3-209ENST00000498500 SLC3A2P08195 630 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms