RNA–Protein interactions for RNA: ENST00000496633.1

CDHR3-214, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 949 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-214ENST00000496633 PDE4DQ08499 809 aa8.8□□□□□ -1
CDHR3-214ENST00000496633 TRIM32Q13049 653 aa8.8□□□□□ -1
CDHR3-214ENST00000496633 BAATQ14032 418 aaPredicted RBP8.8□□□□□ -1
CDHR3-214ENST00000496633 MCTP2Q6DN12 878 aa8.8□□□□□ -1
CDHR3-214ENST00000496633 KCNV1Q6PIU1 500 aa8.8□□□□□ -1
CDHR3-214ENST00000496633 STOX1Q6ZVD7 989 aa8.8□□□□□ -1
CDHR3-214ENST00000496633 ZNF713Q8N859 430 aaPredicted RBP8.8□□□□□ -1
CDHR3-214ENST00000496633 MORC4Q8TE76 937 aa8.8□□□□□ -1
CDHR3-214ENST00000496633 KCNB2Q92953 911 aa8.8□□□□□ -1
CDHR3-214ENST00000496633 CUL5Q93034 780 aa8.8□□□□□ -1
CDHR3-214ENST00000496633 CHMP4CQ96CF2 233 aa8.8□□□□□ -1
CDHR3-214ENST00000496633 MTMR8Q96EF0 704 aa8.8□□□□□ -1
CDHR3-214ENST00000496633 PAWRQ96IZ0 340 aaKnown RBP8.8□□□□□ -1
CDHR3-214ENST00000496633 UBA5Q9GZZ9 404 aa8.8□□□□□ -1
CDHR3-214ENST00000496633 JMJD4Q9H9V9 463 aa8.8□□□□□ -1
CDHR3-214ENST00000496633 MROH7Q68CQ1 1323 aa8.8□□□□□ -1
CDHR3-214ENST00000496633 TNRC18O15417 2968 aaPredicted RBP8.79□□□□□ -1
CDHR3-214ENST00000496633 MKI67P46013 3256 aaKnown RBP8.79□□□□□ -1
CDHR3-214ENST00000496633 ZBTB43O43298 467 aa8.79□□□□□ -1
CDHR3-214ENST00000496633 KPNA6O60684 536 aa8.79□□□□□ -1
CDHR3-214ENST00000496633 CABYRO75952 493 aa8.79□□□□□ -1
CDHR3-214ENST00000496633 SNAI1O95863 264 aaPredicted RBP8.79□□□□□ -1
CDHR3-214ENST00000496633 ZNF865P0CJ78 1059 aaPredicted RBP8.79□□□□□ -1
CDHR3-214ENST00000496633 COL6A1P12109 1028 aa8.79□□□□□ -1
CDHR3-214ENST00000496633 CALML3P27482 149 aa8.79□□□□□ -1
CDHR3-214ENST00000496633 CST5P28325 142 aaPredicted RBP8.79□□□□□ -1
CDHR3-214ENST00000496633 ALDH5A1P51649 535 aaPredicted RBP8.79□□□□□ -1
CDHR3-214ENST00000496633 ANAPC15P60006 121 aa8.79□□□□□ -1
CDHR3-214ENST00000496633 QRICH1Q2TAL8 776 aa8.79□□□□□ -1
CDHR3-214ENST00000496633 USH1GQ495M9 461 aa8.79□□□□□ -1
CDHR3-214ENST00000496633 MUM1L1Q5H9M0 696 aa8.79□□□□□ -1
CDHR3-214ENST00000496633 C1orf53Q5VUE5 145 aa8.79□□□□□ -1
CDHR3-214ENST00000496633 POTEDQ86YR6 584 aa8.79□□□□□ -1
CDHR3-214ENST00000496633 CCDC144CPQ8IYA2 1237 aa8.79□□□□□ -1
CDHR3-214ENST00000496633 FANCBQ8NB91 859 aa8.79□□□□□ -1
CDHR3-214ENST00000496633 SCFD2Q8WU76 684 aa8.79□□□□□ -1
CDHR3-214ENST00000496633 CLEC4DQ8WXI8 215 aa8.79□□□□□ -1
CDHR3-214ENST00000496633 TM6SF1Q9BZW5 370 aa8.79□□□□□ -1
CDHR3-214ENST00000496633 AP5M1Q9H0R1 490 aa8.79□□□□□ -1
CDHR3-214ENST00000496633 EHMT1Q9H9B1 1298 aa8.79□□□□□ -1
CDHR3-214ENST00000496633 VAT1LQ9HCJ6 419 aa8.79□□□□□ -1
CDHR3-214ENST00000496633 PRKAG2Q9UGJ0 569 aa8.79□□□□□ -1
CDHR3-214ENST00000496633 ZHX1Q9UKY1 873 aaPredicted RBP8.79□□□□□ -1
CDHR3-214ENST00000496633 PCDHA1Q9Y5I3 950 aa8.79□□□□□ -1
CDHR3-214ENST00000496633 MYH6P13533 1939 aa8.79□□□□□ -1
CDHR3-214ENST00000496633 SOWAHBA6NEL2 793 aa8.78□□□□□ -1
CDHR3-214ENST00000496633 GCOM1H8Y6P7 765 aaPredicted RBP8.78□□□□□ -1
CDHR3-214ENST00000496633 NFIBO00712 420 aa8.78□□□□□ -1
CDHR3-214ENST00000496633 POLR2MP0CAP2 368 aa8.78□□□□□ -1
CDHR3-214ENST00000496633 CPT1AP50416 773 aa8.78□□□□□ -1
CDHR3-214ENST00000496633 ANTXR2P58335 489 aa8.78□□□□□ -1
CDHR3-214ENST00000496633 NKX3-2P78367 333 aa8.78□□□□□ -1
CDHR3-214ENST00000496633 EXOSC10Q01780 885 aaKnown RBP8.78□□□□□ -1
CDHR3-214ENST00000496633 TNFAIP2Q03169 654 aa8.78□□□□□ -1
CDHR3-214ENST00000496633 STXBP2Q15833 593 aa8.78□□□□□ -1
CDHR3-214ENST00000496633 CCDC144BQ3MJ40 725 aa8.78□□□□□ -1
CDHR3-214ENST00000496633 GNPTABQ3T906 1256 aa8.78□□□□□ -1
CDHR3-214ENST00000496633 ARHGEF16Q5VV41 709 aa8.78□□□□□ -1
CDHR3-214ENST00000496633 XRRA1Q6P2D8 792 aa8.78□□□□□ -1
CDHR3-214ENST00000496633 CPLX2Q6PUV4 134 aaKnown RBP8.78□□□□□ -1
CDHR3-214ENST00000496633 NOL8Q76FK4 1167 aaKnown RBP8.78□□□□□ -1
CDHR3-214ENST00000496633 CHST3Q7LGC8 479 aa8.78□□□□□ -1
CDHR3-214ENST00000496633 FAM177A1Q8N128 213 aaPredicted RBP8.78□□□□□ -1
CDHR3-214ENST00000496633 CCDC12Q8WUD4 166 aaPredicted RBP8.78□□□□□ -1
CDHR3-214ENST00000496633 GLT1D1Q96MS3 346 aa8.78□□□□□ -1
CDHR3-214ENST00000496633 RMDN3Q96TC7 470 aa8.78□□□□□ -1
CDHR3-214ENST00000496633 PHF24Q9UPV7 400 aa8.78□□□□□ -1
CDHR3-214ENST00000496633 CYP46A1Q9Y6A2 500 aa8.78□□□□□ -1
CDHR3-214ENST00000496633 ELP1O95163 1332 aa8.78□□□□□ -1
CDHR3-214ENST00000496633 A0A1W2PPC1 479 aa8.77□□□□□ -1.01
CDHR3-214ENST00000496633 EIF3JO75822 258 aaKnown RBP8.77□□□□□ -1.01
CDHR3-214ENST00000496633 CFBP00751 764 aa8.77□□□□□ -1.01
CDHR3-214ENST00000496633 TGFB3P10600 412 aa8.77□□□□□ -1.01
CDHR3-214ENST00000496633 EDNRBP24530 442 aa8.77□□□□□ -1.01
CDHR3-214ENST00000496633 HSD17B4P51659 736 aa8.77□□□□□ -1.01
CDHR3-214ENST00000496633 GJA9P57773 515 aa8.77□□□□□ -1.01
CDHR3-214ENST00000496633 AKAP17AQ02040 695 aaKnown RBP8.77□□□□□ -1.01
CDHR3-214ENST00000496633 CNTN2Q02246 1040 aa8.77□□□□□ -1.01
CDHR3-214ENST00000496633 TTLL4Q14679 1199 aa8.77□□□□□ -1.01
CDHR3-214ENST00000496633 ANKRD1Q15327 319 aa8.77□□□□□ -1.01
CDHR3-214ENST00000496633 LRRC41Q15345 812 aa8.77□□□□□ -1.01
CDHR3-214ENST00000496633 RTN1Q16799 776 aa8.77□□□□□ -1.01
CDHR3-214ENST00000496633 PRAMEF19Q5SWL8 479 aa8.77□□□□□ -1.01
CDHR3-214ENST00000496633 PPP1R18Q6NYC8 613 aa8.77□□□□□ -1.01
CDHR3-214ENST00000496633 APOA5Q6Q788 366 aa8.77□□□□□ -1.01
CDHR3-214ENST00000496633 HOMER1Q86YM7 354 aa8.77□□□□□ -1.01
CDHR3-214ENST00000496633 STAG2Q8N3U4 1231 aa8.77□□□□□ -1.01
CDHR3-214ENST00000496633 TRPV1Q8NER1 839 aa8.77□□□□□ -1.01
CDHR3-214ENST00000496633 JAKMIP1Q96N16 626 aaKnown RBP8.77□□□□□ -1.01
CDHR3-214ENST00000496633 SENP6Q9GZR1 1112 aaPredicted RBP8.77□□□□□ -1.01
CDHR3-214ENST00000496633 UPF3AQ9H1J1 476 aaKnown RBP8.77□□□□□ -1.01
CDHR3-214ENST00000496633 GPHNQ9NQX3 736 aaPredicted RBP8.77□□□□□ -1.01
CDHR3-214ENST00000496633 POLR3EQ9NVU0 708 aa8.77□□□□□ -1.01
CDHR3-214ENST00000496633 SNX14Q9Y5W7 946 aa8.77□□□□□ -1.01
CDHR3-214ENST00000496633 FRMPD3Q5JV73 1810 aa8.77□□□□□ -1.01
CDHR3-214ENST00000496633 RBM47A0AV96 593 aaKnown RBP8.76□□□□□ -1.01
CDHR3-214ENST00000496633 PIK3CDO00329 1044 aa8.76□□□□□ -1.01
CDHR3-214ENST00000496633 FOSP01100 380 aaPredicted RBP8.76□□□□□ -1.01
CDHR3-214ENST00000496633 C6orf222P0C671 652 aaPredicted RBP8.76□□□□□ -1.01
CDHR3-214ENST00000496633 CASTP20810 708 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms