RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 SF1Q15637 639 aaKnown RBP8.93□□□□□ -0.98
SF3B1-212ENST00000496458 OLFML2BQ68BL8 750 aa8.93□□□□□ -0.98
SF3B1-212ENST00000496458 MBLAC2Q68D91 279 aa8.93□□□□□ -0.98
SF3B1-212ENST00000496458 RPTNQ6XPR3 784 aa8.93□□□□□ -0.98
SF3B1-212ENST00000496458 NLGN2Q8NFZ4 835 aa8.93□□□□□ -0.98
SF3B1-212ENST00000496458 FRS2Q8WU20 508 aa8.93□□□□□ -0.98
SF3B1-212ENST00000496458 SIRT5Q9NXA8 310 aa8.93□□□□□ -0.98
SF3B1-212ENST00000496458 C7orf72A4D263 438 aa8.92□□□□□ -0.98
SF3B1-212ENST00000496458 DBHP09172 617 aa8.92□□□□□ -0.98
SF3B1-212ENST00000496458 MED14OSP0DP75 135 aa8.92□□□□□ -0.98
SF3B1-212ENST00000496458 HOXC12P31275 282 aa8.92□□□□□ -0.98
SF3B1-212ENST00000496458 KCNJ6P48051 423 aa8.92□□□□□ -0.98
SF3B1-212ENST00000496458 DLG4P78352 724 aa8.92□□□□□ -0.98
SF3B1-212ENST00000496458 TMEM62Q0P6H9 643 aa8.92□□□□□ -0.98
SF3B1-212ENST00000496458 TMC6Q7Z403 805 aa8.92□□□□□ -0.98
SF3B1-212ENST00000496458 NPLOC4Q8TAT6 608 aa8.92□□□□□ -0.98
SF3B1-212ENST00000496458 A0A1W2PQU0 124 aa8.91□□□□□ -0.98
SF3B1-212ENST00000496458 DBX1A6NMT0 343 aa8.91□□□□□ -0.98
SF3B1-212ENST00000496458 NPHS1O60500 1241 aa8.91□□□□□ -0.98
SF3B1-212ENST00000496458 PPP2R2AP63151 447 aa8.91□□□□□ -0.98
SF3B1-212ENST00000496458 PRSS53Q2L4Q9 553 aa8.91□□□□□ -0.98
SF3B1-212ENST00000496458 PLEKHN1Q494U1 663 aaPredicted RBP8.91□□□□□ -0.98
SF3B1-212ENST00000496458 LZTR1Q8N653 840 aa8.91□□□□□ -0.98
SF3B1-212ENST00000496458 MMP19Q99542 508 aa8.91□□□□□ -0.98
SF3B1-212ENST00000496458 GCM1Q9NP62 436 aa8.91□□□□□ -0.98
SF3B1-212ENST00000496458 FBLN5Q9UBX5 448 aa8.91□□□□□ -0.98
SF3B1-212ENST00000496458 MBD1Q9UIS9 605 aaPredicted RBP8.91□□□□□ -0.98
SF3B1-212ENST00000496458 SRGAP3O43295 1099 aa8.9□□□□□ -0.98
SF3B1-212ENST00000496458 CYBBP04839 570 aa8.9□□□□□ -0.98
SF3B1-212ENST00000496458 GRIA2P42262 883 aa8.9□□□□□ -0.98
SF3B1-212ENST00000496458 GFRA1P56159 465 aa8.9□□□□□ -0.98
SF3B1-212ENST00000496458 NR1I3Q14994 352 aa8.9□□□□□ -0.98
SF3B1-212ENST00000496458 INF2Q27J81 1249 aa8.9□□□□□ -0.98
SF3B1-212ENST00000496458 LCE3BQ5TA77 95 aa8.9□□□□□ -0.98
SF3B1-212ENST00000496458 CABP7Q86V35 215 aa8.9□□□□□ -0.98
SF3B1-212ENST00000496458 ANKLE2Q86XL3 938 aa8.9□□□□□ -0.98
SF3B1-212ENST00000496458 CD320Q9NPF0 282 aa8.9□□□□□ -0.98
SF3B1-212ENST00000496458 CCDC85CA6NKD9 419 aa8.89□□□□□ -0.99
SF3B1-212ENST00000496458 NPIPB6E9PJ23 425 aa8.89□□□□□ -0.99
SF3B1-212ENST00000496458 PPP1R11O60927 126 aaPredicted RBP8.89□□□□□ -0.99
SF3B1-212ENST00000496458 SCG5P05408 212 aa8.89□□□□□ -0.99
SF3B1-212ENST00000496458 CBX2Q14781 532 aaPredicted RBP8.89□□□□□ -0.99
SF3B1-212ENST00000496458 ZC3H14Q6PJT7 736 aaKnown RBP8.89□□□□□ -0.99
SF3B1-212ENST00000496458 PAQR3Q6TCH7 311 aa8.89□□□□□ -0.99
SF3B1-212ENST00000496458 TMEM145Q8NBT3 493 aa8.89□□□□□ -0.99
SF3B1-212ENST00000496458 ST13P5Q8NFI4 369 aaPredicted RBP8.89□□□□□ -0.99
SF3B1-212ENST00000496458 MTA3Q9BTC8 594 aa8.89□□□□□ -0.99
SF3B1-212ENST00000496458 CNTD2Q9H8S5 307 aa8.89□□□□□ -0.99
SF3B1-212ENST00000496458 TMEFF2Q9UIK5 374 aaPredicted RBP8.89□□□□□ -0.99
SF3B1-212ENST00000496458 SMG5Q9UPR3 1016 aaKnown RBP8.89□□□□□ -0.99
SF3B1-212ENST00000496458 MEFVO15553 781 aaPredicted RBP8.88□□□□□ -0.99
SF3B1-212ENST00000496458 CPP00450 1065 aa8.88□□□□□ -0.99
SF3B1-212ENST00000496458 GLI4P10075 376 aa8.88□□□□□ -0.99
SF3B1-212ENST00000496458 MAPKAPK2P49137 400 aa8.88□□□□□ -0.99
SF3B1-212ENST00000496458 EPHB3P54753 998 aa8.88□□□□□ -0.99
SF3B1-212ENST00000496458 JAG1P78504 1218 aa8.88□□□□□ -0.99
SF3B1-212ENST00000496458 KCNA10Q16322 511 aa8.88□□□□□ -0.99
SF3B1-212ENST00000496458 NBPF6Q5VWK0 638 aa8.88□□□□□ -0.99
SF3B1-212ENST00000496458 CCDC103Q8IW40 242 aa8.88□□□□□ -0.99
SF3B1-212ENST00000496458 KREMEN2Q8NCW0 462 aa8.88□□□□□ -0.99
SF3B1-212ENST00000496458 USP33Q8TEY7 942 aa8.88□□□□□ -0.99
SF3B1-212ENST00000496458 NBPF4Q96M43 638 aa8.88□□□□□ -0.99
SF3B1-212ENST00000496458 CCDC140Q96MF4 163 aa8.88□□□□□ -0.99
SF3B1-212ENST00000496458 HIRIP3Q9BW71 556 aaPredicted RBP8.88□□□□□ -0.99
SF3B1-212ENST00000496458 RXFP1Q9HBX9 757 aa8.88□□□□□ -0.99
SF3B1-212ENST00000496458 BTG4Q9NY30 223 aa8.88□□□□□ -0.99
SF3B1-212ENST00000496458 DBR1Q9UK59 544 aaKnown RBP8.88□□□□□ -0.99
SF3B1-212ENST00000496458 HCFC2Q9Y5Z7 792 aa8.88□□□□□ -0.99
SF3B1-212ENST00000496458 ZC3H12DA2A288 527 aaKnown RBP8.87□□□□□ -0.99
SF3B1-212ENST00000496458 F8W031 263 aaPredicted RBP8.87□□□□□ -0.99
SF3B1-212ENST00000496458 FUCA1P04066 466 aa8.87□□□□□ -0.99
SF3B1-212ENST00000496458 CDR1P51861 262 aa8.87□□□□□ -0.99
SF3B1-212ENST00000496458 SF3A1Q15459 793 aaKnown RBP8.87□□□□□ -0.99
SF3B1-212ENST00000496458 E4F1Q66K89 784 aaPredicted RBP8.87□□□□□ -0.99
SF3B1-212ENST00000496458 CILP2Q8IUL8 1156 aa8.87□□□□□ -0.99
SF3B1-212ENST00000496458 PPIL6Q8IXY8 311 aa8.87□□□□□ -0.99
SF3B1-212ENST00000496458 DIO2Q92813 273 aa8.87□□□□□ -0.99
SF3B1-212ENST00000496458 ARMC5Q96C12 935 aa8.87□□□□□ -0.99
SF3B1-212ENST00000496458 MARCH2Q9P0N8 246 aa8.87□□□□□ -0.99
SF3B1-212ENST00000496458 MSRB2Q9Y3D2 182 aa8.87□□□□□ -0.99
SF3B1-212ENST00000496458 IQCA1LA6NCM1 817 aa8.86□□□□□ -0.99
SF3B1-212ENST00000496458 ARNTLO00327 626 aa8.86□□□□□ -0.99
SF3B1-212ENST00000496458 CAPNS1P04632 268 aa8.86□□□□□ -0.99
SF3B1-212ENST00000496458 LINC00310P59036 64 aa8.86□□□□□ -0.99
SF3B1-212ENST00000496458 ZNF200P98182 395 aaPredicted RBP8.86□□□□□ -0.99
SF3B1-212ENST00000496458 KCNAB2Q13303 367 aa8.86□□□□□ -0.99
SF3B1-212ENST00000496458 HSP90AA2PQ14568 343 aaPredicted RBP8.86□□□□□ -0.99
SF3B1-212ENST00000496458 IQCEQ6IPM2 695 aa8.86□□□□□ -0.99
SF3B1-212ENST00000496458 DPF3Q92784 378 aa8.86□□□□□ -0.99
SF3B1-212ENST00000496458 C1orf159Q96HA4 380 aa8.86□□□□□ -0.99
SF3B1-212ENST00000496458 SGSM3Q96HU1 749 aa8.86□□□□□ -0.99
SF3B1-212ENST00000496458 TOX2Q96NM4 488 aa8.86□□□□□ -0.99
SF3B1-212ENST00000496458 IER2Q9BTL4 223 aa8.86□□□□□ -0.99
SF3B1-212ENST00000496458 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.86□□□□□ -0.99
SF3B1-212ENST00000496458 N4BP3O15049 544 aa8.85□□□□□ -0.99
SF3B1-212ENST00000496458 PDPK1O15530 556 aa8.85□□□□□ -0.99
SF3B1-212ENST00000496458 PRR5P85299 388 aa8.85□□□□□ -0.99
SF3B1-212ENST00000496458 ACBD5Q5T8D3 534 aaPredicted RBP8.85□□□□□ -0.99
SF3B1-212ENST00000496458 DENND5AQ6IQ26 1287 aa8.85□□□□□ -0.99
SF3B1-212ENST00000496458 LDHDQ86WU2 507 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms